RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 MRPL22Q9NWU5 206 aaKnown RBP14.61□□□□□ -0.07
NKX3-1-201ENST00000380871 MRPS18BQ9Y676 258 aaKnown RBP14.61□□□□□ -0.07
NKX3-1-201ENST00000380871 KIF26BQ2KJY2 2108 aa14.6□□□□□ -0.07
NKX3-1-201ENST00000380871 BCAT2O15382 392 aaPredicted RBP14.6□□□□□ -0.07
NKX3-1-201ENST00000380871 OPN1LWP04000 364 aa14.6□□□□□ -0.07
NKX3-1-201ENST00000380871 GUSBP08236 651 aa14.6□□□□□ -0.07
NKX3-1-201ENST00000380871 ZNF117Q03924 483 aa14.6□□□□□ -0.07
NKX3-1-201ENST00000380871 RASGEF1BQ0VAM2 473 aa14.6□□□□□ -0.07
NKX3-1-201ENST00000380871 NKPD1Q17RQ9 610 aa14.6□□□□□ -0.07
NKX3-1-201ENST00000380871 SCGB2B2Q4G0G5 96 aa14.6□□□□□ -0.07
NKX3-1-201ENST00000380871 KRT77Q7Z794 578 aa14.6□□□□□ -0.07
NKX3-1-201ENST00000380871 GPX8Q8TED1 209 aa14.6□□□□□ -0.07
NKX3-1-201ENST00000380871 NKD1Q969G9 470 aa14.6□□□□□ -0.07
NKX3-1-201ENST00000380871 SEC22AQ96IW7 307 aa14.6□□□□□ -0.07
NKX3-1-201ENST00000380871 TAS2R8Q9NYW2 309 aa14.6□□□□□ -0.07
NKX3-1-201ENST00000380871 TMEM82A0PJX8 343 aa14.6□□□□□ -0.07
NKX3-1-201ENST00000380871 KRBOX1C9JBD0 128 aa14.6□□□□□ -0.07
NKX3-1-201ENST00000380871 SLC17A2O00624 439 aa14.6□□□□□ -0.07
NKX3-1-201ENST00000380871 SLC16A7O60669 478 aa14.6□□□□□ -0.07
NKX3-1-201ENST00000380871 RAB3DO95716 219 aa14.6□□□□□ -0.07
NKX3-1-201ENST00000380871 AMY2AP04746 511 aa14.6□□□□□ -0.07
NKX3-1-201ENST00000380871 CXCR1P25024 350 aa14.6□□□□□ -0.07
NKX3-1-201ENST00000380871 DHPSP49366 369 aaPredicted RBP14.6□□□□□ -0.07
NKX3-1-201ENST00000380871 SLC17A1Q14916 467 aa14.6□□□□□ -0.07
NKX3-1-201ENST00000380871 NAXDQ8IW45 347 aa14.6□□□□□ -0.07
NKX3-1-201ENST00000380871 LIPHQ8WWY8 451 aa14.6□□□□□ -0.07
NKX3-1-201ENST00000380871 ZNF75AQ96N20 296 aa14.6□□□□□ -0.07
NKX3-1-201ENST00000380871 ARPC5LQ9BPX5 153 aa14.6□□□□□ -0.07
NKX3-1-201ENST00000380871 OR11A1Q9GZK7 315 aa14.6□□□□□ -0.07
NKX3-1-201ENST00000380871 MED9Q9NWA0 146 aa14.6□□□□□ -0.07
NKX3-1-201ENST00000380871 MRPS17Q9Y2R5 130 aaKnown RBP14.6□□□□□ -0.07
NKX3-1-201ENST00000380871 FITM1A5D6W6 292 aa14.6□□□□□ -0.07
NKX3-1-201ENST00000380871 ITGB2P05107 769 aa14.6□□□□□ -0.07
NKX3-1-201ENST00000380871 CTLA4P16410 223 aa14.6□□□□□ -0.07
NKX3-1-201ENST00000380871 CALCRP30988 508 aa14.6□□□□□ -0.07
NKX3-1-201ENST00000380871 PPICP45877 212 aa14.6□□□□□ -0.07
NKX3-1-201ENST00000380871 SPOCK1Q08629 439 aa14.6□□□□□ -0.07
NKX3-1-201ENST00000380871 TMEM225Q6GV28 225 aa14.6□□□□□ -0.07
NKX3-1-201ENST00000380871 LRFN4Q6PJG9 635 aa14.6□□□□□ -0.07
NKX3-1-201ENST00000380871 STEAP2Q8NFT2 490 aa14.6□□□□□ -0.07
NKX3-1-201ENST00000380871 OR8B4Q96RC9 309 aa14.6□□□□□ -0.07
NKX3-1-201ENST00000380871 ZC4H2Q9NQZ6 224 aa14.6□□□□□ -0.07
NKX3-1-201ENST00000380871 DUX1O43812 170 aa14.59□□□□□ -0.07
NKX3-1-201ENST00000380871 HPP00738 406 aa14.59□□□□□ -0.07
NKX3-1-201ENST00000380871 ELP2Q6IA86 826 aa14.59□□□□□ -0.07
NKX3-1-201ENST00000380871 ZNF546Q86UE3 836 aa14.59□□□□□ -0.07
NKX3-1-201ENST00000380871 LOC101059948A0A1B0GTJ6 334 aa14.59□□□□□ -0.07
NKX3-1-201ENST00000380871 TMEM235A6NFC5 223 aa14.59□□□□□ -0.07
NKX3-1-201ENST00000380871 D6RAR5 112 aa14.59□□□□□ -0.07
NKX3-1-201ENST00000380871 H0YIG0 161 aa14.59□□□□□ -0.07
NKX3-1-201ENST00000380871 GMFBP60983 142 aa14.59□□□□□ -0.07
NKX3-1-201ENST00000380871 INSM1Q01101 510 aaPredicted RBP14.59□□□□□ -0.07
NKX3-1-201ENST00000380871 SMAD2Q15796 467 aaKnown RBP14.59□□□□□ -0.07
NKX3-1-201ENST00000380871 ACKR1Q16570 336 aa14.59□□□□□ -0.07
NKX3-1-201ENST00000380871 MRTO4Q9UKD2 239 aaKnown RBP14.59□□□□□ -0.07
NKX3-1-201ENST00000380871 TOR1AO14656 332 aa14.58□□□□□ -0.07
NKX3-1-201ENST00000380871 TMEM127O75204 238 aa14.58□□□□□ -0.07
NKX3-1-201ENST00000380871 ZNF432O94892 652 aa14.58□□□□□ -0.07
NKX3-1-201ENST00000380871 PLATP00750 562 aa14.58□□□□□ -0.07
NKX3-1-201ENST00000380871 RPA2P15927 270 aa14.58□□□□□ -0.07
NKX3-1-201ENST00000380871 SLC22A6Q4U2R8 563 aa14.58□□□□□ -0.07
NKX3-1-201ENST00000380871 ATPAF1Q5TC12 328 aaPredicted RBP14.58□□□□□ -0.07
NKX3-1-201ENST00000380871 FAM166AQ6J272 317 aa14.58□□□□□ -0.07
NKX3-1-201ENST00000380871 RTN4RL2Q86UN3 420 aa14.58□□□□□ -0.07
NKX3-1-201ENST00000380871 CD163Q86VB7 1156 aa14.58□□□□□ -0.07
NKX3-1-201ENST00000380871 PLXDC1Q8IUK5 500 aa14.58□□□□□ -0.07
NKX3-1-201ENST00000380871 C9orf40Q8IXQ3 194 aa14.58□□□□□ -0.07
NKX3-1-201ENST00000380871 ZNF440Q8IYI8 595 aa14.58□□□□□ -0.07
NKX3-1-201ENST00000380871 C12orf45Q8N5I9 185 aaPredicted RBP14.58□□□□□ -0.07
NKX3-1-201ENST00000380871 ASB5Q8WWX0 329 aa14.58□□□□□ -0.07
NKX3-1-201ENST00000380871 METTL21AQ8WXB1 218 aa14.58□□□□□ -0.07
NKX3-1-201ENST00000380871 CMBLQ96DG6 245 aa14.58□□□□□ -0.07
NKX3-1-201ENST00000380871 TMEM185BQ9H7F4 350 aa14.58□□□□□ -0.07
NKX3-1-201ENST00000380871 DHDHQ9UQ10 334 aa14.58□□□□□ -0.07
NKX3-1-201ENST00000380871 XKRYO14609 159 aa14.58□□□□□ -0.08
NKX3-1-201ENST00000380871 SLC25A12O75746 678 aa14.58□□□□□ -0.08
NKX3-1-201ENST00000380871 DDAH2O95865 285 aa14.58□□□□□ -0.08
NKX3-1-201ENST00000380871 ADAM8P78325 824 aa14.58□□□□□ -0.08
NKX3-1-201ENST00000380871 BIKQ13323 160 aa14.58□□□□□ -0.08
NKX3-1-201ENST00000380871 BEST3Q8N1M1 668 aa14.58□□□□□ -0.08
NKX3-1-201ENST00000380871 OR2I1PQ8NGU4 316 aa14.58□□□□□ -0.08
NKX3-1-201ENST00000380871 OR10K1Q8NGX5 313 aa14.58□□□□□ -0.08
NKX3-1-201ENST00000380871 OR6K3Q8NGY3 331 aa14.58□□□□□ -0.08
NKX3-1-201ENST00000380871 ST8SIA2Q92186 375 aa14.58□□□□□ -0.08
NKX3-1-201ENST00000380871 ZNF578Q96N58 590 aaPredicted RBP14.58□□□□□ -0.08
NKX3-1-201ENST00000380871 SLC46A1Q96NT5 459 aa14.58□□□□□ -0.08
NKX3-1-201ENST00000380871 CMKLR1Q99788 373 aa14.58□□□□□ -0.08
NKX3-1-201ENST00000380871 VN1R1Q9GZP7 353 aa14.58□□□□□ -0.08
NKX3-1-201ENST00000380871 COPS7AQ9UBW8 275 aa14.58□□□□□ -0.08
NKX3-1-201ENST00000380871 KLK13Q9UKR3 277 aa14.58□□□□□ -0.08
NKX3-1-201ENST00000380871 RFPL4AA6NLU0 287 aa14.58□□□□□ -0.08
NKX3-1-201ENST00000380871 RFPL4AL1F8VTS6 287 aa14.58□□□□□ -0.08
NKX3-1-201ENST00000380871 IL33O95760 270 aa14.58□□□□□ -0.08
NKX3-1-201ENST00000380871 LUMP51884 338 aaPredicted RBP14.58□□□□□ -0.08
NKX3-1-201ENST00000380871 DHRS2Q13268 280 aa14.58□□□□□ -0.08
NKX3-1-201ENST00000380871 Q7L0L9 218 aa14.58□□□□□ -0.08
NKX3-1-201ENST00000380871 JAGN1Q8N5M9 183 aa14.58□□□□□ -0.08
NKX3-1-201ENST00000380871 ACBD4Q8NC06 268 aa14.58□□□□□ -0.08
NKX3-1-201ENST00000380871 ZNF721Q8TF20 911 aa14.58□□□□□ -0.08
NKX3-1-201ENST00000380871 TMEM14AQ9Y6G1 99 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 107.7 ms