RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 PABPC1L2AQ5JQF8 200 aa11.01□□□□□ -0.65
SMN1-202ENST00000380707 MEDAGQ5VYS4 303 aa11.01□□□□□ -0.65
SMN1-202ENST00000380707 SLC18B1Q6NT16 456 aa11.01□□□□□ -0.65
SMN1-202ENST00000380707 TMEM53Q6P2H8 277 aa11.01□□□□□ -0.65
SMN1-202ENST00000380707 FAM169BQ8N8A8 192 aa11.01□□□□□ -0.65
SMN1-202ENST00000380707 CPEB3Q8NE35 698 aaKnown RBP11.01□□□□□ -0.65
SMN1-202ENST00000380707 AKR7LQ8NHP1 331 aa11.01□□□□□ -0.65
SMN1-202ENST00000380707 INTS14Q96SY0 518 aa11.01□□□□□ -0.65
SMN1-202ENST00000380707 OR2H1Q9GZK4 316 aa11.01□□□□□ -0.65
SMN1-202ENST00000380707 WNT5BQ9H1J7 359 aa11.01□□□□□ -0.65
SMN1-202ENST00000380707 POLR1DQ9Y2S0 133 aa11.01□□□□□ -0.65
SMN1-202ENST00000380707 FLNBO75369 2602 aaKnown RBP11.01□□□□□ -0.65
SMN1-202ENST00000380707 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11□□□□□ -0.65
SMN1-202ENST00000380707 SERPINA5P05154 406 aa11□□□□□ -0.65
SMN1-202ENST00000380707 MRPL3P09001 348 aaKnown RBP11□□□□□ -0.65
SMN1-202ENST00000380707 SPARCP09486 303 aa11□□□□□ -0.65
SMN1-202ENST00000380707 CECR9P0C854 216 aa11□□□□□ -0.65
SMN1-202ENST00000380707 PAX7P23759 505 aa11□□□□□ -0.65
SMN1-202ENST00000380707 NAA10P41227 235 aaPredicted RBP11□□□□□ -0.65
SMN1-202ENST00000380707 HSPA13P48723 471 aa11□□□□□ -0.65
SMN1-202ENST00000380707 HCCSP53701 268 aa11□□□□□ -0.65
SMN1-202ENST00000380707 HIST1H3AP68431 136 aa11□□□□□ -0.65
SMN1-202ENST00000380707 BSPH1Q075Z2 132 aa11□□□□□ -0.65
SMN1-202ENST00000380707 GGTLC2Q14390 218 aa11□□□□□ -0.65
SMN1-202ENST00000380707 SMN1Q16637 294 aaKnown RBP11□□□□□ -0.65
SMN1-202ENST00000380707 CCDC92Q53HC0 331 aaPredicted RBP11□□□□□ -0.65
SMN1-202ENST00000380707 TEX30Q5JUR7 227 aa11□□□□□ -0.65
SMN1-202ENST00000380707 HIST2H3PS2Q5TEC6 136 aa11□□□□□ -0.65
SMN1-202ENST00000380707 LCN1P1Q5VSP4 162 aa11□□□□□ -0.65
SMN1-202ENST00000380707 ZNF774Q6NX45 483 aa11□□□□□ -0.65
SMN1-202ENST00000380707 CFAP77Q6ZQR2 320 aa11□□□□□ -0.65
SMN1-202ENST00000380707 HIST2H3AQ71DI3 136 aa11□□□□□ -0.65
SMN1-202ENST00000380707 DPY19L4Q7Z388 723 aa11□□□□□ -0.65
SMN1-202ENST00000380707 C8orf59Q8N0T1 100 aaPredicted RBP11□□□□□ -0.65
SMN1-202ENST00000380707 SETD9Q8NE22 299 aa11□□□□□ -0.65
SMN1-202ENST00000380707 GJC3Q8NFK1 279 aa11□□□□□ -0.65
SMN1-202ENST00000380707 CNIH3Q8TBE1 160 aa11□□□□□ -0.65
SMN1-202ENST00000380707 RFKQ969G6 155 aa11□□□□□ -0.65
SMN1-202ENST00000380707 PLPPR2Q96GM1 343 aa11□□□□□ -0.65
SMN1-202ENST00000380707 WACQ9BTA9 647 aa11□□□□□ -0.65
SMN1-202ENST00000380707 RASSF4Q9H2L5 321 aa11□□□□□ -0.65
SMN1-202ENST00000380707 MOV10Q9HCE1 1003 aaKnown RBP11□□□□□ -0.65
SMN1-202ENST00000380707 NGBQ9NPG2 151 aa11□□□□□ -0.65
SMN1-202ENST00000380707 CLN6Q9NWW5 311 aa11□□□□□ -0.65
SMN1-202ENST00000380707 HAO2Q9NYQ3 351 aa11□□□□□ -0.65
SMN1-202ENST00000380707 WARS2Q9UGM6 360 aaKnown RBP11□□□□□ -0.65
SMN1-202ENST00000380707 KCNG2Q9UJ96 466 aa11□□□□□ -0.65
SMN1-202ENST00000380707 GDF2Q9UK05 429 aaPredicted RBP11□□□□□ -0.65
SMN1-202ENST00000380707 CADP27708 2225 aa11□□□□□ -0.65
SMN1-202ENST00000380707 ABCA4P78363 2273 aa11□□□□□ -0.65
SMN1-202ENST00000380707 VPS13CQ709C8 3753 aa11□□□□□ -0.65
SMN1-202ENST00000380707 A6NNC1 897 aa10.99□□□□□ -0.65
SMN1-202ENST00000380707 CD40P25942 277 aa10.99□□□□□ -0.65
SMN1-202ENST00000380707 APEX1P27695 318 aaKnown RBP10.99□□□□□ -0.65
SMN1-202ENST00000380707 LOXP28300 417 aaPredicted RBP10.99□□□□□ -0.65
SMN1-202ENST00000380707 NUDT6P53370 316 aa10.99□□□□□ -0.65
SMN1-202ENST00000380707 SCRN3Q0VDG4 424 aa10.99□□□□□ -0.65
SMN1-202ENST00000380707 C3orf36Q3SXR2 165 aa10.99□□□□□ -0.65
SMN1-202ENST00000380707 BEX5Q5H9J7 111 aa10.99□□□□□ -0.65
SMN1-202ENST00000380707 NCMAPQ5T1S8 102 aa10.99□□□□□ -0.65
SMN1-202ENST00000380707 TMEM154Q6P9G4 183 aa10.99□□□□□ -0.65
SMN1-202ENST00000380707 TMEM108Q6UXF1 575 aa10.99□□□□□ -0.65
SMN1-202ENST00000380707 VASH1Q7L8A9 365 aaPredicted RBP10.99□□□□□ -0.65
SMN1-202ENST00000380707 DCXRQ7Z4W1 244 aa10.99□□□□□ -0.65
SMN1-202ENST00000380707 ZNF295-AS1Q8N0V1 137 aa10.99□□□□□ -0.65
SMN1-202ENST00000380707 OR51G2Q8NGK0 314 aa10.99□□□□□ -0.65
SMN1-202ENST00000380707 OR6N2Q8NGY6 317 aa10.99□□□□□ -0.65
SMN1-202ENST00000380707 OR2AJ1Q8NGZ0 328 aa10.99□□□□□ -0.65
SMN1-202ENST00000380707 PIK3IP1Q96FE7 263 aa10.99□□□□□ -0.65
SMN1-202ENST00000380707 MAP6Q96JE9 813 aa10.99□□□□□ -0.65
SMN1-202ENST00000380707 Q96MT0 163 aa10.99□□□□□ -0.65
SMN1-202ENST00000380707 HS3ST6Q96QI5 342 aa10.99□□□□□ -0.65
SMN1-202ENST00000380707 ZNF184Q99676 751 aaPredicted RBP10.99□□□□□ -0.65
SMN1-202ENST00000380707 ESRP2Q9H6T0 727 aaKnown RBP10.99□□□□□ -0.65
SMN1-202ENST00000380707 ADGRL4Q9HBW9 690 aa10.99□□□□□ -0.65
SMN1-202ENST00000380707 AMBNQ9NP70 447 aa10.99□□□□□ -0.65
SMN1-202ENST00000380707 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.99□□□□□ -0.65
SMN1-202ENST00000380707 HSPE1-MOB4S4R3N1 261 aa10.99□□□□□ -0.65
SMN1-202ENST00000380707 ITPR2Q14571 2701 aa10.99□□□□□ -0.65
SMN1-202ENST00000380707 RTTNQ86VV8 2226 aa10.99□□□□□ -0.65
SMN1-202ENST00000380707 ABCA12Q86UK0 2595 aa10.99□□□□□ -0.65
SMN1-202ENST00000380707 SGCEO43556 437 aa10.99□□□□□ -0.65
SMN1-202ENST00000380707 SYNGR3O43761 229 aa10.99□□□□□ -0.65
SMN1-202ENST00000380707 TMCC2O75069 709 aa10.99□□□□□ -0.65
SMN1-202ENST00000380707 APOL3O95236 402 aa10.99□□□□□ -0.65
SMN1-202ENST00000380707 CCL2P13500 99 aa10.99□□□□□ -0.65
SMN1-202ENST00000380707 PTAFRP25105 342 aa10.99□□□□□ -0.65
SMN1-202ENST00000380707 MTNR1AP48039 350 aa10.99□□□□□ -0.65
SMN1-202ENST00000380707 PLP2Q04941 152 aa10.99□□□□□ -0.65
SMN1-202ENST00000380707 SPOCK1Q08629 439 aa10.99□□□□□ -0.65
SMN1-202ENST00000380707 CDK5R2Q13319 367 aa10.99□□□□□ -0.65
SMN1-202ENST00000380707 TMED1Q13445 227 aa10.99□□□□□ -0.65
SMN1-202ENST00000380707 LAIR2Q6ISS4 152 aa10.99□□□□□ -0.65
SMN1-202ENST00000380707 SLC16A9Q7RTY1 509 aa10.99□□□□□ -0.65
SMN1-202ENST00000380707 THAP5Q7Z6K1 395 aa10.99□□□□□ -0.65
SMN1-202ENST00000380707 ALDH16A1Q8IZ83 802 aa10.99□□□□□ -0.65
SMN1-202ENST00000380707 SLC30A7Q8NEW0 376 aa10.99□□□□□ -0.65
SMN1-202ENST00000380707 OR10S1Q8NGN2 331 aa10.99□□□□□ -0.65
SMN1-202ENST00000380707 OTOSQ8NHW6 89 aa10.99□□□□□ -0.65
SMN1-202ENST00000380707 ST7LQ8TDW4 575 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms