RNA–Protein interactions for RNA: ENST00000380701.7

CCDC171-201, Transcript of coiled-coil domain containing 171, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC171, Length 6,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-201ENST00000380701 PRAMEF5Q5TYX0 476 aa6.53□□□□□ -1.36
CCDC171-201ENST00000380701 PRAMEF6Q5VXH4 476 aa6.53□□□□□ -1.36
CCDC171-201ENST00000380701 SFXN4Q6P4A7 337 aa6.53□□□□□ -1.36
CCDC171-201ENST00000380701 RFLNAQ6ZTI6 216 aa6.53□□□□□ -1.36
CCDC171-201ENST00000380701 KDF1Q8NAX2 398 aaPredicted RBP6.53□□□□□ -1.36
CCDC171-201ENST00000380701 CDX2Q99626 313 aaPredicted RBP6.53□□□□□ -1.36
CCDC171-201ENST00000380701 COMMD5Q9GZQ3 224 aa6.53□□□□□ -1.36
CCDC171-201ENST00000380701 NPAP1Q9NZP6 1156 aa6.53□□□□□ -1.36
CCDC171-201ENST00000380701 COPS3Q9UNS2 423 aa6.53□□□□□ -1.36
CCDC171-201ENST00000380701 COL22A1Q8NFW1 1626 aaPredicted RBP6.53□□□□□ -1.36
CCDC171-201ENST00000380701 IGHV1OR21-1A0A087WYE8 117 aa6.53□□□□□ -1.36
CCDC171-201ENST00000380701 PRSS37A4D1T9 235 aa6.53□□□□□ -1.36
CCDC171-201ENST00000380701 TAAR5O14804 337 aa6.53□□□□□ -1.36
CCDC171-201ENST00000380701 SNAPINO95295 136 aa6.53□□□□□ -1.36
CCDC171-201ENST00000380701 GRPP07492 148 aa6.53□□□□□ -1.36
CCDC171-201ENST00000380701 MAKP20794 623 aa6.53□□□□□ -1.36
CCDC171-201ENST00000380701 HLA-DMAP28067 261 aa6.53□□□□□ -1.36
CCDC171-201ENST00000380701 BSGP35613 385 aa6.53□□□□□ -1.36
CCDC171-201ENST00000380701 FAM209AQ5JX71 171 aa6.53□□□□□ -1.36
CCDC171-201ENST00000380701 DEGS2Q6QHC5 323 aa6.53□□□□□ -1.36
CCDC171-201ENST00000380701 TMEM200AQ86VY9 491 aa6.53□□□□□ -1.36
CCDC171-201ENST00000380701 PELI3Q8N2H9 469 aa6.53□□□□□ -1.36
CCDC171-201ENST00000380701 RHOXF1Q8NHV9 184 aa6.53□□□□□ -1.36
CCDC171-201ENST00000380701 CNTNAP3Q9BZ76 1288 aa6.53□□□□□ -1.36
CCDC171-201ENST00000380701 ZNF436Q9C0F3 470 aaPredicted RBP6.53□□□□□ -1.36
CCDC171-201ENST00000380701 HES4Q9HCC6 221 aa6.53□□□□□ -1.36
CCDC171-201ENST00000380701 IGHV1OR15-9A0A0B4J2B8 117 aa6.52□□□□□ -1.36
CCDC171-201ENST00000380701 SERTM1A2A2V5 107 aa6.52□□□□□ -1.36
CCDC171-201ENST00000380701 FAM183AA6NL82 134 aa6.52□□□□□ -1.36
CCDC171-201ENST00000380701 CLEC3BP05452 202 aa6.52□□□□□ -1.36
CCDC171-201ENST00000380701 SBK2P0C263 348 aa6.52□□□□□ -1.36
CCDC171-201ENST00000380701 HLA-DOBP13765 273 aa6.52□□□□□ -1.36
CCDC171-201ENST00000380701 LIPAP38571 399 aa6.52□□□□□ -1.36
CCDC171-201ENST00000380701 PIGFQ07326 219 aa6.52□□□□□ -1.36
CCDC171-201ENST00000380701 ZNF620Q6ZNG0 422 aa6.52□□□□□ -1.36
CCDC171-201ENST00000380701 IDO2Q6ZQW0 420 aa6.52□□□□□ -1.36
CCDC171-201ENST00000380701 ABI3BPQ7Z7G0 1075 aa6.52□□□□□ -1.36
CCDC171-201ENST00000380701 LINC00346Q8IVM7 164 aa6.52□□□□□ -1.36
CCDC171-201ENST00000380701 TP53I13Q8NBR0 393 aaPredicted RBP6.52□□□□□ -1.36
CCDC171-201ENST00000380701 NUBPLQ8TB37 319 aa6.52□□□□□ -1.36
CCDC171-201ENST00000380701 SEC22CQ9BRL7 303 aa6.52□□□□□ -1.36
CCDC171-201ENST00000380701 SLC6A17Q9H1V8 727 aa6.52□□□□□ -1.36
CCDC171-201ENST00000380701 R4GMQ9 66 aa6.52□□□□□ -1.36
CCDC171-201ENST00000380701 PHIPQ8WWQ0 1821 aa6.52□□□□□ -1.37
CCDC171-201ENST00000380701 OR2J2O76002 312 aa6.52□□□□□ -1.37
CCDC171-201ENST00000380701 YIF1AO95070 293 aa6.52□□□□□ -1.37
CCDC171-201ENST00000380701 HLA-HP01893 362 aa6.52□□□□□ -1.37
CCDC171-201ENST00000380701 MDH2P40926 338 aaKnown RBP6.52□□□□□ -1.37
CCDC171-201ENST00000380701 EMX1Q04741 257 aaPredicted RBP6.52□□□□□ -1.37
CCDC171-201ENST00000380701 DOC2BQ14184 412 aa6.52□□□□□ -1.37
CCDC171-201ENST00000380701 TATDN3Q17R31 274 aa6.52□□□□□ -1.37
CCDC171-201ENST00000380701 PNLIPRP3Q17RR3 467 aa6.52□□□□□ -1.37
CCDC171-201ENST00000380701 TIGITQ495A1 244 aa6.52□□□□□ -1.37
CCDC171-201ENST00000380701 SYT6Q5T7P8 510 aaPredicted RBP6.52□□□□□ -1.37
CCDC171-201ENST00000380701 STEAP1BQ6NZ63 245 aa6.52□□□□□ -1.37
CCDC171-201ENST00000380701 DRAM2Q6UX65 266 aa6.52□□□□□ -1.37
CCDC171-201ENST00000380701 PHC2Q8IXK0 858 aa6.52□□□□□ -1.37
CCDC171-201ENST00000380701 OR2AK2Q8NG84 335 aa6.52□□□□□ -1.37
CCDC171-201ENST00000380701 TCTEX1D2Q8WW35 142 aa6.52□□□□□ -1.37
CCDC171-201ENST00000380701 GNPNAT1Q96EK6 184 aaPredicted RBP6.52□□□□□ -1.37
CCDC171-201ENST00000380701 DPCDQ9BVM2 203 aaPredicted RBP6.52□□□□□ -1.37
CCDC171-201ENST00000380701 SCN7AQ01118 1682 aa6.52□□□□□ -1.37
CCDC171-201ENST00000380701 B4E171 279 aa6.52□□□□□ -1.37
CCDC171-201ENST00000380701 ARPC5O15511 151 aa6.52□□□□□ -1.37
CCDC171-201ENST00000380701 ZNF85Q03923 595 aa6.52□□□□□ -1.37
CCDC171-201ENST00000380701 IGFBP7Q16270 282 aa6.52□□□□□ -1.37
CCDC171-201ENST00000380701 KHDC1LQ5JSQ8 128 aa6.52□□□□□ -1.37
CCDC171-201ENST00000380701 COMTD1Q86VU5 262 aa6.52□□□□□ -1.37
CCDC171-201ENST00000380701 SLC38A9Q8NBW4 561 aa6.52□□□□□ -1.37
CCDC171-201ENST00000380701 DEFB124Q8NES8 71 aa6.52□□□□□ -1.37
CCDC171-201ENST00000380701 OR5D13Q8NGL4 314 aa6.52□□□□□ -1.37
CCDC171-201ENST00000380701 TMEM255BQ8WV15 326 aa6.52□□□□□ -1.37
CCDC171-201ENST00000380701 MRPS24Q96EL2 167 aaKnown RBP6.52□□□□□ -1.37
CCDC171-201ENST00000380701 GRAMD2BQ96HH9 432 aa6.52□□□□□ -1.37
CCDC171-201ENST00000380701 Q96M85 177 aa6.52□□□□□ -1.37
CCDC171-201ENST00000380701 SLC29A1Q99808 456 aa6.52□□□□□ -1.37
CCDC171-201ENST00000380701 TJP1Q07157 1748 aa6.52□□□□□ -1.37
CCDC171-201ENST00000380701 DDX60Q8IY21 1712 aaKnown RBP6.52□□□□□ -1.37
CCDC171-201ENST00000380701 A0A1B0GTQ1 180 aa6.52□□□□□ -1.37
CCDC171-201ENST00000380701 LOC107986453A0A1B0GWG9 222 aa6.52□□□□□ -1.37
CCDC171-201ENST00000380701 PRSS44E7EML9 344 aa6.52□□□□□ -1.37
CCDC171-201ENST00000380701 F8W036 122 aa6.52□□□□□ -1.37
CCDC171-201ENST00000380701 BHLHE40O14503 412 aa6.52□□□□□ -1.37
CCDC171-201ENST00000380701 TUSC2O75896 110 aa6.52□□□□□ -1.37
CCDC171-201ENST00000380701 NUDT7P0C024 238 aa6.52□□□□□ -1.37
CCDC171-201ENST00000380701 CCR9P51686 369 aa6.52□□□□□ -1.37
CCDC171-201ENST00000380701 BAXQ07812 192 aa6.52□□□□□ -1.37
CCDC171-201ENST00000380701 LSAMPQ13449 338 aa6.52□□□□□ -1.37
CCDC171-201ENST00000380701 TRMT12Q53H54 448 aaKnown RBP6.52□□□□□ -1.37
CCDC171-201ENST00000380701 RHBDD2Q6NTF9 364 aa6.52□□□□□ -1.37
CCDC171-201ENST00000380701 SKA3Q8IX90 412 aa6.52□□□□□ -1.37
CCDC171-201ENST00000380701 OR13G1Q8NGZ3 307 aa6.52□□□□□ -1.37
CCDC171-201ENST00000380701 SDSLQ96GA7 329 aa6.52□□□□□ -1.37
CCDC171-201ENST00000380701 ZC3HAV1LQ96H79 300 aaKnown RBP6.52□□□□□ -1.37
CCDC171-201ENST00000380701 FCRL1Q96LA6 429 aa6.52□□□□□ -1.37
CCDC171-201ENST00000380701 DIRC2Q96SL1 478 aa6.52□□□□□ -1.37
CCDC171-201ENST00000380701 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.52□□□□□ -1.37
CCDC171-201ENST00000380701 A0A0U1RQS6 177 aa6.52□□□□□ -1.37
CCDC171-201ENST00000380701 NRG2O14511 850 aaPredicted RBP6.52□□□□□ -1.37
CCDC171-201ENST00000380701 MMP11P24347 488 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms