RNA–Protein interactions for RNA: ENST00000380680.4

UBL3-201, Transcript of ubiquitin like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBL3, Length 4,384 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBL3-201ENST00000380680 RAB22AQ9UL26 194 aa16.08■□□□□ 0.17
UBL3-201ENST00000380680 SLC5A6Q9Y289 635 aa16.08■□□□□ 0.17
UBL3-201ENST00000380680 NOSIPQ9Y314 301 aaKnown RBP16.08■□□□□ 0.17
UBL3-201ENST00000380680 SIX6O95475 246 aa16.08■□□□□ 0.16
UBL3-201ENST00000380680 APLNRP35414 380 aa16.08■□□□□ 0.16
UBL3-201ENST00000380680 SLC9A3R2Q15599 337 aa16.08■□□□□ 0.16
UBL3-201ENST00000380680 C1QL3Q5VWW1 255 aa16.08■□□□□ 0.16
UBL3-201ENST00000380680 NPSR1Q6W5P4 371 aa16.08■□□□□ 0.16
UBL3-201ENST00000380680 NANOS1Q8WY41 292 aaKnown RBP16.08■□□□□ 0.16
UBL3-201ENST00000380680 SARGQ9BW04 601 aa16.08■□□□□ 0.16
UBL3-201ENST00000380680 CALHM2Q9HA72 323 aa16.08■□□□□ 0.16
UBL3-201ENST00000380680 PLEKHB1Q9UF11 243 aaPredicted RBP16.08■□□□□ 0.16
UBL3-201ENST00000380680 SSX4O60224 188 aa16.08■□□□□ 0.16
UBL3-201ENST00000380680 CT45A8P0DMV1 189 aa16.08■□□□□ 0.16
UBL3-201ENST00000380680 CT45A9P0DMV2 189 aa16.08■□□□□ 0.16
UBL3-201ENST00000380680 ATP1B3P54709 279 aa16.08■□□□□ 0.16
UBL3-201ENST00000380680 CT45A2Q5DJT8 189 aa16.08■□□□□ 0.16
UBL3-201ENST00000380680 CPT1CQ8TCG5 803 aa16.08■□□□□ 0.16
UBL3-201ENST00000380680 BANF2Q9H503 90 aa16.08■□□□□ 0.16
UBL3-201ENST00000380680 KLK11Q9UBX7 282 aa16.08■□□□□ 0.16
UBL3-201ENST00000380680 PCDHGA1Q9Y5H4 931 aa16.08■□□□□ 0.16
UBL3-201ENST00000380680 BORCS7-ASMTA0A0B4J1R7 106 aa16.08■□□□□ 0.16
UBL3-201ENST00000380680 A0A1B0GTH9 108 aa16.08■□□□□ 0.16
UBL3-201ENST00000380680 LALBAP00709 142 aa16.08■□□□□ 0.16
UBL3-201ENST00000380680 HOXB5P09067 269 aa16.08■□□□□ 0.16
UBL3-201ENST00000380680 SEC61A1P61619 476 aaKnown RBP16.08■□□□□ 0.16
UBL3-201ENST00000380680 C2orf76Q3KRA6 126 aa16.08■□□□□ 0.16
UBL3-201ENST00000380680 CD276Q5ZPR3 534 aa16.08■□□□□ 0.16
UBL3-201ENST00000380680 KANSL1Q7Z3B3 1105 aa16.08■□□□□ 0.16
UBL3-201ENST00000380680 MAML2Q8IZL2 1156 aaPredicted RBP16.08■□□□□ 0.16
UBL3-201ENST00000380680 ZNF611Q8N823 705 aa16.08■□□□□ 0.16
UBL3-201ENST00000380680 TM4SF19Q96DZ7 209 aa16.08■□□□□ 0.16
UBL3-201ENST00000380680 HRH3Q9Y5N1 445 aa16.08■□□□□ 0.16
UBL3-201ENST00000380680 TMEM235A6NFC5 223 aa16.07■□□□□ 0.16
UBL3-201ENST00000380680 S100A9P06702 114 aaKnown RBP16.07■□□□□ 0.16
UBL3-201ENST00000380680 LAP3P28838 519 aa16.07■□□□□ 0.16
UBL3-201ENST00000380680 CLDN6P56747 220 aa16.07■□□□□ 0.16
UBL3-201ENST00000380680 GTPBP8Q8N3Z3 284 aaPredicted RBP16.07■□□□□ 0.16
UBL3-201ENST00000380680 ZNF321PQ8N8H1 164 aa16.07■□□□□ 0.16
UBL3-201ENST00000380680 OTOSQ8NHW6 89 aa16.07■□□□□ 0.16
UBL3-201ENST00000380680 SPACA9Q96E40 222 aaPredicted RBP16.07■□□□□ 0.16
UBL3-201ENST00000380680 PAPOLGQ9BWT3 736 aaKnown RBP16.07■□□□□ 0.16
UBL3-201ENST00000380680 JAM3Q9BX67 310 aa16.07■□□□□ 0.16
UBL3-201ENST00000380680 VAMP5O95183 116 aa16.07■□□□□ 0.16
UBL3-201ENST00000380680 SELENOVP59797 346 aa16.07■□□□□ 0.16
UBL3-201ENST00000380680 THEM4Q5T1C6 240 aa16.07■□□□□ 0.16
UBL3-201ENST00000380680 FLVCR2Q9UPI3 526 aa16.07■□□□□ 0.16
UBL3-201ENST00000380680 FKBP2P26885 142 aaKnown RBP16.07■□□□□ 0.16
UBL3-201ENST00000380680 CRYBA2P53672 197 aa16.07■□□□□ 0.16
UBL3-201ENST00000380680 TOMM34Q15785 309 aaPredicted RBP16.07■□□□□ 0.16
UBL3-201ENST00000380680 EXOSC6Q5RKV6 272 aaKnown RBP16.07■□□□□ 0.16
UBL3-201ENST00000380680 DGAT2L6Q6ZPD8 337 aa16.07■□□□□ 0.16
UBL3-201ENST00000380680 GRAMD2AQ8IUY3 354 aa16.07■□□□□ 0.16
UBL3-201ENST00000380680 LSMEM1Q8N8F7 131 aa16.07■□□□□ 0.16
UBL3-201ENST00000380680 CMSS1Q9BQ75 279 aaKnown RBP16.07■□□□□ 0.16
UBL3-201ENST00000380680 SLCO5A1Q9H2Y9 848 aa16.07■□□□□ 0.16
UBL3-201ENST00000380680 FAM86C1Q9NVL1 165 aa16.07■□□□□ 0.16
UBL3-201ENST00000380680 LSM5Q9Y4Y9 91 aaKnown RBP16.07■□□□□ 0.16
UBL3-201ENST00000380680 ZSWIM8A7E2V4 1837 aa16.07■□□□□ 0.16
UBL3-201ENST00000380680 CD46P15529 392 aa16.06■□□□□ 0.16
UBL3-201ENST00000380680 GABRB1P18505 474 aa16.06■□□□□ 0.16
UBL3-201ENST00000380680 CX3CR1P49238 355 aa16.06■□□□□ 0.16
UBL3-201ENST00000380680 ARTNQ5T4W7 220 aa16.06■□□□□ 0.16
UBL3-201ENST00000380680 SULF2Q8IWU5 870 aa16.06■□□□□ 0.16
UBL3-201ENST00000380680 STOML3Q8TAV4 291 aa16.06■□□□□ 0.16
UBL3-201ENST00000380680 THOC3Q96J01 351 aaKnown RBP16.06■□□□□ 0.16
UBL3-201ENST00000380680 OR8B4Q96RC9 309 aa16.06■□□□□ 0.16
UBL3-201ENST00000380680 PILRAQ9UKJ1 303 aa16.06■□□□□ 0.16
UBL3-201ENST00000380680 POM121CA8CG34 1229 aa16.06■□□□□ 0.16
UBL3-201ENST00000380680 IMPA2O14732 288 aa16.06■□□□□ 0.16
UBL3-201ENST00000380680 POU3F3P20264 500 aaPredicted RBP16.06■□□□□ 0.16
UBL3-201ENST00000380680 SLC25A1P53007 311 aa16.06■□□□□ 0.16
UBL3-201ENST00000380680 TGFBR3Q03167 851 aa16.06■□□□□ 0.16
UBL3-201ENST00000380680 FUT7Q11130 342 aa16.06■□□□□ 0.16
UBL3-201ENST00000380680 DMRTC1Q5HYR2 192 aa16.06■□□□□ 0.16
UBL3-201ENST00000380680 SLC25A30Q5SVS4 291 aa16.06■□□□□ 0.16
UBL3-201ENST00000380680 METTL9Q9H1A3 318 aa16.06■□□□□ 0.16
UBL3-201ENST00000380680 COQ3Q9NZJ6 369 aa16.06■□□□□ 0.16
UBL3-201ENST00000380680 A0A0A6YYH2 397 aa16.06■□□□□ 0.16
UBL3-201ENST00000380680 A6NJ64 397 aa16.06■□□□□ 0.16
UBL3-201ENST00000380680 PRICKLE3O43900 615 aaPredicted RBP16.06■□□□□ 0.16
UBL3-201ENST00000380680 PTHLHP12272 177 aa16.06■□□□□ 0.16
UBL3-201ENST00000380680 FMODQ06828 376 aa16.06■□□□□ 0.16
UBL3-201ENST00000380680 MKXQ8IYA7 352 aa16.06■□□□□ 0.16
UBL3-201ENST00000380680 CNEP1R1Q8N9A8 125 aa16.06■□□□□ 0.16
UBL3-201ENST00000380680 BOLLQ8N9W6 283 aaKnown RBP16.06■□□□□ 0.16
UBL3-201ENST00000380680 OR10G3Q8NGC4 313 aa16.06■□□□□ 0.16
UBL3-201ENST00000380680 BARHL1Q9BZE3 327 aa16.06■□□□□ 0.16
UBL3-201ENST00000380680 PPA2Q9H2U2 334 aa16.06■□□□□ 0.16
UBL3-201ENST00000380680 FSCN3Q9NQT6 498 aa16.06■□□□□ 0.16
UBL3-201ENST00000380680 NUP50Q9UKX7 468 aa16.06■□□□□ 0.16
UBL3-201ENST00000380680 C1QBP02746 253 aa16.05■□□□□ 0.16
UBL3-201ENST00000380680 ZNF35P13682 527 aa16.05■□□□□ 0.16
UBL3-201ENST00000380680 NAGAP17050 411 aa16.05■□□□□ 0.16
UBL3-201ENST00000380680 NFYAP23511 347 aaPredicted RBP16.05■□□□□ 0.16
UBL3-201ENST00000380680 OPCMLQ14982 345 aa16.05■□□□□ 0.16
UBL3-201ENST00000380680 PGAP1Q75T13 922 aa16.05■□□□□ 0.16
UBL3-201ENST00000380680 DDOQ99489 341 aa16.05■□□□□ 0.16
UBL3-201ENST00000380680 NKX3-1Q99801 234 aaPredicted RBP16.05■□□□□ 0.16
UBL3-201ENST00000380680 FANCFQ9NPI8 374 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms