RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 TMEM9BQ9NQ34 198 aa20.6■□□□□ 0.89
VPS16-201ENST00000380443 NUFIP1Q9UHK0 495 aaKnown RBP20.6■□□□□ 0.89
VPS16-201ENST00000380443 GTF2A1LQ9UNN4 478 aa20.6■□□□□ 0.89
VPS16-201ENST00000380443 ZNF292O60281 2723 aa20.6■□□□□ 0.89
VPS16-201ENST00000380443 A0A1W2PNR3 127 aa20.6■□□□□ 0.89
VPS16-201ENST00000380443 ZNF726A6NNF4 738 aa20.6■□□□□ 0.89
VPS16-201ENST00000380443 KRT33AO76009 404 aa20.6■□□□□ 0.89
VPS16-201ENST00000380443 CCL3P10147 92 aa20.6■□□□□ 0.89
VPS16-201ENST00000380443 CSRP1P21291 193 aaKnown RBP20.6■□□□□ 0.89
VPS16-201ENST00000380443 BTCP35070 178 aa20.6■□□□□ 0.89
VPS16-201ENST00000380443 CAPZA1P52907 286 aa20.6■□□□□ 0.89
VPS16-201ENST00000380443 MFGE8Q08431 387 aaPredicted RBP20.6■□□□□ 0.89
VPS16-201ENST00000380443 KCNMB1Q16558 191 aa20.6■□□□□ 0.89
VPS16-201ENST00000380443 TMEM69Q5SWH9 247 aa20.6■□□□□ 0.89
VPS16-201ENST00000380443 GLT8D1Q68CQ7 371 aa20.6■□□□□ 0.89
VPS16-201ENST00000380443 SLC25A47Q6Q0C1 308 aa20.6■□□□□ 0.89
VPS16-201ENST00000380443 ZNF486Q96H40 463 aaPredicted RBP20.6■□□□□ 0.89
VPS16-201ENST00000380443 NAA11Q9BSU3 229 aaPredicted RBP20.6■□□□□ 0.89
VPS16-201ENST00000380443 TRAF4Q9BUZ4 470 aaPredicted RBP20.6■□□□□ 0.89
VPS16-201ENST00000380443 G6PC2Q9NQR9 355 aa20.6■□□□□ 0.89
VPS16-201ENST00000380443 PIEZO1Q92508 2521 aa20.59■□□□□ 0.89
VPS16-201ENST00000380443 COL27A1Q8IZC6 1860 aaPredicted RBP20.59■□□□□ 0.89
VPS16-201ENST00000380443 IGKV1D-43A0A0B4J1Z2 117 aa20.59■□□□□ 0.89
VPS16-201ENST00000380443 SLC17A2O00624 439 aa20.59■□□□□ 0.89
VPS16-201ENST00000380443 ARSBP15848 533 aa20.59■□□□□ 0.89
VPS16-201ENST00000380443 AGFG1P52594 562 aaKnown RBP20.59■□□□□ 0.89
VPS16-201ENST00000380443 SNTB2Q13425 540 aaKnown RBP20.59■□□□□ 0.89
VPS16-201ENST00000380443 HIST3H3Q16695 136 aa20.59■□□□□ 0.89
VPS16-201ENST00000380443 KLHL24Q6TFL4 600 aa20.59■□□□□ 0.89
VPS16-201ENST00000380443 ESPNLQ6ZVH7 1005 aa20.59■□□□□ 0.89
VPS16-201ENST00000380443 PPP1R32Q7Z5V6 425 aa20.59■□□□□ 0.89
VPS16-201ENST00000380443 TCTE3Q8IZS6 198 aa20.59■□□□□ 0.89
VPS16-201ENST00000380443 EMC6Q9BV81 110 aa20.59■□□□□ 0.89
VPS16-201ENST00000380443 PROK2Q9HC23 129 aa20.59■□□□□ 0.89
VPS16-201ENST00000380443 RBMX2Q9Y388 322 aaKnown RBP20.59■□□□□ 0.89
VPS16-201ENST00000380443 N6AMT1Q9Y5N5 214 aa20.59■□□□□ 0.89
VPS16-201ENST00000380443 ALPK2Q86TB3 2170 aa20.58■□□□□ 0.89
VPS16-201ENST00000380443 TMEM269A0A1B0GVZ9 245 aa20.58■□□□□ 0.89
VPS16-201ENST00000380443 GJE1A6NN92 205 aa20.58■□□□□ 0.89
VPS16-201ENST00000380443 ACOT7O00154 380 aa20.58■□□□□ 0.89
VPS16-201ENST00000380443 IGFBP3P17936 291 aaPredicted RBP20.58■□□□□ 0.89
VPS16-201ENST00000380443 SDHBP21912 280 aa20.58■□□□□ 0.89
VPS16-201ENST00000380443 GDNFP39905 211 aa20.58■□□□□ 0.89
VPS16-201ENST00000380443 PTH2RP49190 550 aa20.58■□□□□ 0.89
VPS16-201ENST00000380443 CSNK2A1P68400 391 aaPredicted RBP20.58■□□□□ 0.89
VPS16-201ENST00000380443 RAB11BQ15907 218 aa20.58■□□□□ 0.89
VPS16-201ENST00000380443 ODF4Q2M2E3 257 aa20.58■□□□□ 0.89
VPS16-201ENST00000380443 H3F3CQ6NXT2 135 aa20.58■□□□□ 0.89
VPS16-201ENST00000380443 RAB11FIP2Q7L804 512 aa20.58■□□□□ 0.89
VPS16-201ENST00000380443 OR5M1Q8NGP8 315 aa20.58■□□□□ 0.89
VPS16-201ENST00000380443 LIN37Q96GY3 246 aaPredicted RBP20.58■□□□□ 0.89
VPS16-201ENST00000380443 FAM117AQ9C073 453 aa20.58■□□□□ 0.89
VPS16-201ENST00000380443 TMEM185BQ9H7F4 350 aa20.58■□□□□ 0.89
VPS16-201ENST00000380443 MOB1AQ9H8S9 216 aa20.58■□□□□ 0.89
VPS16-201ENST00000380443 DDX28Q9NUL7 540 aaKnown RBP20.58■□□□□ 0.89
VPS16-201ENST00000380443 DKKL1Q9UK85 242 aa20.58■□□□□ 0.89
VPS16-201ENST00000380443 FARSAQ9Y285 508 aaKnown RBP20.58■□□□□ 0.89
VPS16-201ENST00000380443 EMC9Q9Y3B6 208 aa20.58■□□□□ 0.89
VPS16-201ENST00000380443 XRCC3O43542 346 aa20.57■□□□□ 0.88
VPS16-201ENST00000380443 DNPH1O43598 174 aa20.57■□□□□ 0.88
VPS16-201ENST00000380443 SRP9P49458 86 aaKnown RBP20.57■□□□□ 0.88
VPS16-201ENST00000380443 CLDN12P56749 244 aa20.57■□□□□ 0.88
VPS16-201ENST00000380443 RRAS2P62070 204 aaPredicted RBP20.57■□□□□ 0.88
VPS16-201ENST00000380443 H3F3AP84243 136 aa20.57■□□□□ 0.88
VPS16-201ENST00000380443 POU4F3Q15319 338 aa20.57■□□□□ 0.88
VPS16-201ENST00000380443 FAM166AQ6J272 317 aa20.57■□□□□ 0.88
VPS16-201ENST00000380443 GLCCI1Q86VQ1 547 aa20.57■□□□□ 0.88
VPS16-201ENST00000380443 WDFY1Q8IWB7 410 aa20.57■□□□□ 0.88
VPS16-201ENST00000380443 SLAMF6Q96DU3 332 aa20.57■□□□□ 0.88
VPS16-201ENST00000380443 POU2F3Q9UKI9 436 aa20.57■□□□□ 0.88
VPS16-201ENST00000380443 TCRBP04435 133 aa20.57■□□□□ 0.88
VPS16-201ENST00000380443 SFTPDP35247 375 aa20.57■□□□□ 0.88
VPS16-201ENST00000380443 BCL2L15Q5TBC7 163 aa20.57■□□□□ 0.88
VPS16-201ENST00000380443 OTPQ5XKR4 325 aa20.57■□□□□ 0.88
VPS16-201ENST00000380443 LRFN4Q6PJG9 635 aa20.57■□□□□ 0.88
VPS16-201ENST00000380443 DNM1P46Q6ZS02 220 aa20.57■□□□□ 0.88
VPS16-201ENST00000380443 GPAT4Q86UL3 456 aa20.57■□□□□ 0.88
VPS16-201ENST00000380443 LINC00346Q8IVM7 164 aa20.57■□□□□ 0.88
VPS16-201ENST00000380443 OR2AJ1Q8NGZ0 328 aa20.57■□□□□ 0.88
VPS16-201ENST00000380443 AKAP1Q92667 903 aaKnown RBP eCLIP20.57■□□□□ 0.88
VPS16-201ENST00000380443 FOXRED1Q96CU9 486 aaPredicted RBP20.57■□□□□ 0.88
VPS16-201ENST00000380443 PIGQQ9BRB3 760 aa20.57■□□□□ 0.88
VPS16-201ENST00000380443 CACNG6Q9BXT2 260 aa20.57■□□□□ 0.88
VPS16-201ENST00000380443 DIABLOQ9NR28 239 aa20.57■□□□□ 0.88
VPS16-201ENST00000380443 ING3Q9NXR8 418 aa20.57■□□□□ 0.88
VPS16-201ENST00000380443 FREM3P0C091 2139 aa20.56■□□□□ 0.88
VPS16-201ENST00000380443 ZIC3O60481 467 aa20.56■□□□□ 0.88
VPS16-201ENST00000380443 ADRB1P08588 477 aa20.56■□□□□ 0.88
VPS16-201ENST00000380443 TCN2P20062 427 aa20.56■□□□□ 0.88
VPS16-201ENST00000380443 DNASE1L1P49184 302 aa20.56■□□□□ 0.88
VPS16-201ENST00000380443 RAC1P63000 192 aa20.56■□□□□ 0.88
VPS16-201ENST00000380443 C19orf57Q0VDD7 668 aa20.56■□□□□ 0.88
VPS16-201ENST00000380443 CAMK2DQ13557 499 aa20.56■□□□□ 0.88
VPS16-201ENST00000380443 STPG1Q5TH74 334 aa20.56■□□□□ 0.88
VPS16-201ENST00000380443 ANKRD16Q6P6B7 361 aa20.56■□□□□ 0.88
VPS16-201ENST00000380443 PRSS45Q7RTY3 260 aa20.56■□□□□ 0.88
VPS16-201ENST00000380443 MDGA2Q7Z553 956 aa20.56■□□□□ 0.88
VPS16-201ENST00000380443 DNAAF1Q8NEP3 725 aa20.56■□□□□ 0.88
VPS16-201ENST00000380443 CT55Q8WUE5 264 aa20.56■□□□□ 0.88
VPS16-201ENST00000380443 SPRY4Q9C004 299 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms