RNA–Protein interactions for RNA: ENST00000379143.9

PCNA-201, Transcript of proliferating cell nuclear antigen, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCNA, Length 1,344 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNA-201ENST00000379143 MED20Q9H944 212 aa10.34□□□□□ -0.75
PCNA-201ENST00000379143 H2AFY2Q9P0M6 372 aaPredicted RBP10.34□□□□□ -0.75
PCNA-201ENST00000379143 CYB5R1Q9UHQ9 305 aa10.34□□□□□ -0.75
PCNA-201ENST00000379143 ATPIF1Q9UII2 106 aa10.34□□□□□ -0.75
PCNA-201ENST00000379143 NDRG4Q9ULP0 352 aaKnown RBP10.34□□□□□ -0.75
PCNA-201ENST00000379143 SPEF1Q9Y4P9 236 aa10.34□□□□□ -0.75
PCNA-201ENST00000379143 COMMD3-BMI1R4GMX3 469 aa10.34□□□□□ -0.75
PCNA-201ENST00000379143 HIVEP1P15822 2718 aa10.34□□□□□ -0.75
PCNA-201ENST00000379143 AKAP9Q99996 3911 aa10.34□□□□□ -0.75
PCNA-201ENST00000379143 IGHV2OR16-5A0A0B4J2B6 119 aa10.33□□□□□ -0.76
PCNA-201ENST00000379143 SHISA9B4DS77 424 aa10.33□□□□□ -0.76
PCNA-201ENST00000379143 DOK2O60496 412 aa10.33□□□□□ -0.76
PCNA-201ENST00000379143 GPANK1O95872 356 aa10.33□□□□□ -0.76
PCNA-201ENST00000379143 STOMP27105 288 aa10.33□□□□□ -0.76
PCNA-201ENST00000379143 GSTT1P30711 240 aa10.33□□□□□ -0.76
PCNA-201ENST00000379143 GGT2P36268 569 aa10.33□□□□□ -0.76
PCNA-201ENST00000379143 ENTPD1P49961 510 aa10.33□□□□□ -0.76
PCNA-201ENST00000379143 RPS7P62081 194 aaKnown RBP10.33□□□□□ -0.76
PCNA-201ENST00000379143 GALK2Q01415 458 aa10.33□□□□□ -0.76
PCNA-201ENST00000379143 KEAP1Q14145 624 aa10.33□□□□□ -0.76
PCNA-201ENST00000379143 MEP1BQ16820 701 aa10.33□□□□□ -0.76
PCNA-201ENST00000379143 KLHL12Q53G59 568 aa10.33□□□□□ -0.76
PCNA-201ENST00000379143 LINC01590Q5TEZ4 76 aa10.33□□□□□ -0.76
PCNA-201ENST00000379143 ARL9Q6T311 187 aa10.33□□□□□ -0.76
PCNA-201ENST00000379143 C20orf204Q6ZNR8 217 aa10.33□□□□□ -0.76
PCNA-201ENST00000379143 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.33□□□□□ -0.76
PCNA-201ENST00000379143 GALNT4Q8N4A0 578 aa10.33□□□□□ -0.76
PCNA-201ENST00000379143 KBTBD8Q8NFY9 601 aa10.33□□□□□ -0.76
PCNA-201ENST00000379143 FAM81AQ8TBF8 368 aa10.33□□□□□ -0.76
PCNA-201ENST00000379143 ZNRF4Q8WWF5 429 aa10.33□□□□□ -0.76
PCNA-201ENST00000379143 IPCEF1Q8WWN9 437 aaPredicted RBP10.33□□□□□ -0.76
PCNA-201ENST00000379143 AKAP1Q92667 903 aaKnown RBP eCLIP10.33□□□□□ -0.76
PCNA-201ENST00000379143 RFKQ969G6 155 aa10.33□□□□□ -0.76
PCNA-201ENST00000379143 FBXW5Q969U6 566 aa10.33□□□□□ -0.76
PCNA-201ENST00000379143 INTS14Q96SY0 518 aa10.33□□□□□ -0.76
PCNA-201ENST00000379143 MBOAT4Q96T53 435 aa10.33□□□□□ -0.76
PCNA-201ENST00000379143 PITX2Q99697 317 aa10.33□□□□□ -0.76
PCNA-201ENST00000379143 KRTAP3-3Q9BYR6 98 aa10.33□□□□□ -0.76
PCNA-201ENST00000379143 KRTAP3-2Q9BYR7 98 aa10.33□□□□□ -0.76
PCNA-201ENST00000379143 HDHD2Q9H0R4 259 aa10.33□□□□□ -0.76
PCNA-201ENST00000379143 WNT5BQ9H1J7 359 aa10.33□□□□□ -0.76
PCNA-201ENST00000379143 VCX3BQ9H321 246 aa10.33□□□□□ -0.76
PCNA-201ENST00000379143 CDH20Q9HBT6 801 aa10.33□□□□□ -0.76
PCNA-201ENST00000379143 FAIMQ9NVQ4 179 aa10.33□□□□□ -0.76
PCNA-201ENST00000379143 MRPL22Q9NWU5 206 aaKnown RBP10.33□□□□□ -0.76
PCNA-201ENST00000379143 PLEK2Q9NYT0 353 aa10.33□□□□□ -0.76
PCNA-201ENST00000379143 NKX1-2Q9UD57 310 aaPredicted RBP10.33□□□□□ -0.76
PCNA-201ENST00000379143 GMPPBQ9Y5P6 360 aa10.33□□□□□ -0.76
PCNA-201ENST00000379143 LHFPL6Q9Y693 200 aa10.33□□□□□ -0.76
PCNA-201ENST00000379143 LOC100130705A0A1B0GUX0 176 aa10.33□□□□□ -0.76
PCNA-201ENST00000379143 A0A1W2PPR1 153 aa10.33□□□□□ -0.76
PCNA-201ENST00000379143 TVP23AA6NH52 213 aa10.33□□□□□ -0.76
PCNA-201ENST00000379143 SLC22A31A6NKX4 558 aa10.33□□□□□ -0.76
PCNA-201ENST00000379143 VSTM5A8MXK1 200 aa10.33□□□□□ -0.76
PCNA-201ENST00000379143 E9PQ18 207 aa10.33□□□□□ -0.76
PCNA-201ENST00000379143 ATP6V1G2-DDX39BF2Z307 99 aa10.33□□□□□ -0.76
PCNA-201ENST00000379143 HS3ST1O14792 307 aa10.33□□□□□ -0.76
PCNA-201ENST00000379143 SLC16A6O15403 523 aa10.33□□□□□ -0.76
PCNA-201ENST00000379143 MPZL2O60487 215 aa10.33□□□□□ -0.76
PCNA-201ENST00000379143 PLAUP00749 431 aa10.33□□□□□ -0.76
PCNA-201ENST00000379143 ZNF35P13682 527 aa10.33□□□□□ -0.76
PCNA-201ENST00000379143 SLC2A5P22732 501 aa10.33□□□□□ -0.76
PCNA-201ENST00000379143 APEX1P27695 318 aaKnown RBP10.33□□□□□ -0.76
PCNA-201ENST00000379143 GDI2P50395 445 aaKnown RBP10.33□□□□□ -0.76
PCNA-201ENST00000379143 CDH11P55287 796 aa10.33□□□□□ -0.76
PCNA-201ENST00000379143 HIST1H3AP68431 136 aa10.33□□□□□ -0.76
PCNA-201ENST00000379143 SPOCK1Q08629 439 aa10.33□□□□□ -0.76
PCNA-201ENST00000379143 ECH1Q13011 328 aa10.33□□□□□ -0.76
PCNA-201ENST00000379143 APOFQ13790 326 aa10.33□□□□□ -0.76
PCNA-201ENST00000379143 RAB35Q15286 201 aa10.33□□□□□ -0.76
PCNA-201ENST00000379143 PCK2Q16822 640 aa10.33□□□□□ -0.76
PCNA-201ENST00000379143 HIST2H3PS2Q5TEC6 136 aa10.33□□□□□ -0.76
PCNA-201ENST00000379143 AADACL4Q5VUY2 407 aa10.33□□□□□ -0.76
PCNA-201ENST00000379143 TTC23Q5W5X9 447 aa10.33□□□□□ -0.76
PCNA-201ENST00000379143 SLC18B1Q6NT16 456 aa10.33□□□□□ -0.76
PCNA-201ENST00000379143 ZNF774Q6NX45 483 aa10.33□□□□□ -0.76
PCNA-201ENST00000379143 HIST2H3AQ71DI3 136 aa10.33□□□□□ -0.76
PCNA-201ENST00000379143 VASH1Q7L8A9 365 aaPredicted RBP10.33□□□□□ -0.76
PCNA-201ENST00000379143 SHFQ7M4L6 423 aa10.33□□□□□ -0.76
PCNA-201ENST00000379143 MYPOPQ86VE0 399 aaPredicted RBP10.33□□□□□ -0.76
PCNA-201ENST00000379143 C1orf174Q8IYL3 243 aa10.33□□□□□ -0.76
PCNA-201ENST00000379143 ZNF611Q8N823 705 aa10.33□□□□□ -0.76
PCNA-201ENST00000379143 ZNF511Q8NB15 262 aa10.33□□□□□ -0.76
PCNA-201ENST00000379143 CPEB3Q8NE35 698 aaKnown RBP10.33□□□□□ -0.76
PCNA-201ENST00000379143 NUP37Q8NFH4 326 aa10.33□□□□□ -0.76
PCNA-201ENST00000379143 LILRB1Q8NHL6 650 aaPredicted RBP10.33□□□□□ -0.76
PCNA-201ENST00000379143 AKR7LQ8NHP1 331 aa10.33□□□□□ -0.76
PCNA-201ENST00000379143 POM121L2Q96KW2 1035 aa10.33□□□□□ -0.76
PCNA-201ENST00000379143 IL4I1Q96RQ9 567 aa10.33□□□□□ -0.76
PCNA-201ENST00000379143 TEAD3Q99594 435 aa10.33□□□□□ -0.76
PCNA-201ENST00000379143 APOL4Q9BPW4 351 aa10.33□□□□□ -0.76
PCNA-201ENST00000379143 MARCH7Q9H992 704 aa10.33□□□□□ -0.76
PCNA-201ENST00000379143 UBTD1Q9HAC8 227 aa10.33□□□□□ -0.76
PCNA-201ENST00000379143 FAM118AQ9NWS6 357 aa10.33□□□□□ -0.76
PCNA-201ENST00000379143 CISD1Q9NZ45 108 aaKnown RBP10.33□□□□□ -0.76
PCNA-201ENST00000379143 ATP23Q9Y6H3 246 aa10.33□□□□□ -0.76
PCNA-201ENST00000379143 C5orf49A4QMS7 147 aa10.32□□□□□ -0.76
PCNA-201ENST00000379143 OR6C6A6NF89 314 aa10.32□□□□□ -0.76
PCNA-201ENST00000379143 SNTNA6NMZ2 147 aa10.32□□□□□ -0.76
PCNA-201ENST00000379143 ZNF593O00488 134 aaPredicted RBP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms