RNA–Protein interactions for RNA: ENST00000377499.9

LMO7-204, Transcript of LIM domain 7, human

TSL 2

Gene LMO7, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMO7-204	ENST00000377499	WDFY3	Q8IZQ1	3526 aa		10.51	□□□□□ -0.73
LMO7-204	ENST00000377499	SLC22A31	A6NKX4	558 aa		10.51	□□□□□ -0.73
LMO7-204	ENST00000377499	ABCD4	O14678	606 aa		10.51	□□□□□ -0.73
LMO7-204	ENST00000377499	GATB	O75879	557 aa	Known RBP	10.51	□□□□□ -0.73
LMO7-204	ENST00000377499	APEX1	P27695	318 aa	Known RBP	10.51	□□□□□ -0.73
LMO7-204	ENST00000377499	PYCR1	P32322	319 aa		10.51	□□□□□ -0.73
LMO7-204	ENST00000377499	DNASE1L1	P49184	302 aa		10.51	□□□□□ -0.73
LMO7-204	ENST00000377499	TAS2R60	P59551	318 aa		10.51	□□□□□ -0.73
LMO7-204	ENST00000377499	EGR4	Q05215	589 aa		10.51	□□□□□ -0.73
LMO7-204	ENST00000377499	PABPC1L2A	Q5JQF8	200 aa		10.51	□□□□□ -0.73
LMO7-204	ENST00000377499	TMEM201	Q5SNT2	666 aa		10.51	□□□□□ -0.73
LMO7-204	ENST00000377499	CDCP2	Q5VXM1	449 aa		10.51	□□□□□ -0.73
LMO7-204	ENST00000377499	MZT2B	Q6NZ67	158 aa		10.51	□□□□□ -0.73
LMO7-204	ENST00000377499	MDGA2	Q7Z553	956 aa		10.51	□□□□□ -0.73
LMO7-204	ENST00000377499	MRGPRE	Q86SM8	312 aa		10.51	□□□□□ -0.73
LMO7-204	ENST00000377499	LIX1L	Q8IVB5	337 aa		10.51	□□□□□ -0.73
LMO7-204	ENST00000377499	CLEC1A	Q8NC01	280 aa		10.51	□□□□□ -0.73
LMO7-204	ENST00000377499	OR1J4	Q8NGS1	313 aa		10.51	□□□□□ -0.73
LMO7-204	ENST00000377499	OIT3	Q8WWZ8	545 aa		10.51	□□□□□ -0.73
LMO7-204	ENST00000377499	HGD	Q93099	445 aa		10.51	□□□□□ -0.73
LMO7-204	ENST00000377499	DDIT4L	Q96D03	193 aa		10.51	□□□□□ -0.73
LMO7-204	ENST00000377499	SOX7	Q9BT81	388 aa		10.51	□□□□□ -0.73
LMO7-204	ENST00000377499	HDHD2	Q9H0R4	259 aa		10.51	□□□□□ -0.73
LMO7-204	ENST00000377499	ADAMTS20	P59510	1910 aa		10.51	□□□□□ -0.73
LMO7-204	ENST00000377499		M0R082	166 aa		10.5	□□□□□ -0.73
LMO7-204	ENST00000377499	PLA2G10	O15496	165 aa		10.5	□□□□□ -0.73
LMO7-204	ENST00000377499	OR2T1	O43869	369 aa		10.5	□□□□□ -0.73
LMO7-204	ENST00000377499	AKR7A3	O95154	331 aa		10.5	□□□□□ -0.73
LMO7-204	ENST00000377499	CYC1	P08574	325 aa		10.5	□□□□□ -0.73
LMO7-204	ENST00000377499	FBP1	P09467	338 aa		10.5	□□□□□ -0.73
LMO7-204	ENST00000377499	SLC2A2	P11168	524 aa	Predicted RBP	10.5	□□□□□ -0.73
LMO7-204	ENST00000377499	CXCL3	P19876	107 aa		10.5	□□□□□ -0.73
LMO7-204	ENST00000377499	DPP4	P27487	766 aa		10.5	□□□□□ -0.73
LMO7-204	ENST00000377499	HTR1F	P30939	366 aa		10.5	□□□□□ -0.73
LMO7-204	ENST00000377499	TSPAN5	P62079	268 aa		10.5	□□□□□ -0.73
LMO7-204	ENST00000377499	FOXK1	P85037	733 aa		10.5	□□□□□ -0.73
LMO7-204	ENST00000377499	NTRK2	Q16620	822 aa		10.5	□□□□□ -0.73
LMO7-204	ENST00000377499	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	10.5	□□□□□ -0.73	1e-6	■□□□□ 9.4
LMO7-204	ENST00000377499	LINC00114	Q6XXX2	140 aa		10.5	□□□□□ -0.73
LMO7-204	ENST00000377499	SLC46A3	Q7Z3Q1	461 aa		10.5	□□□□□ -0.73
LMO7-204	ENST00000377499	NAA40	Q86UY6	237 aa		10.5	□□□□□ -0.73
LMO7-204	ENST00000377499	VASH2	Q86V25	355 aa		10.5	□□□□□ -0.73
LMO7-204	ENST00000377499	OR2T35	Q8NGX2	323 aa		10.5	□□□□□ -0.73
LMO7-204	ENST00000377499	ZNF417	Q8TAU3	575 aa		10.5	□□□□□ -0.73
LMO7-204	ENST00000377499	ZNF587	Q96SQ5	575 aa	Predicted RBP	10.5	□□□□□ -0.73
LMO7-204	ENST00000377499	TEAD3	Q99594	435 aa		10.5	□□□□□ -0.73
LMO7-204	ENST00000377499	ADAM19	Q9H013	955 aa		10.5	□□□□□ -0.73
LMO7-204	ENST00000377499	ABI3	Q9P2A4	366 aa		10.5	□□□□□ -0.73
LMO7-204	ENST00000377499		A0A1W2PNR3	127 aa		10.5	□□□□□ -0.73
LMO7-204	ENST00000377499	BTBD17	A6NE02	478 aa		10.5	□□□□□ -0.73
LMO7-204	ENST00000377499		J3QLW9	94 aa		10.5	□□□□□ -0.73
LMO7-204	ENST00000377499	SULT1C2	O00338	296 aa		10.5	□□□□□ -0.73
LMO7-204	ENST00000377499	IMPA2	O14732	288 aa		10.5	□□□□□ -0.73
LMO7-204	ENST00000377499	REN	P00797	406 aa		10.5	□□□□□ -0.73
LMO7-204	ENST00000377499	CD14	P08571	375 aa		10.5	□□□□□ -0.73
LMO7-204	ENST00000377499	ZNF19	P17023	458 aa		10.5	□□□□□ -0.73
LMO7-204	ENST00000377499	EIF2S3	P41091	472 aa	Known RBP	10.5	□□□□□ -0.73
LMO7-204	ENST00000377499	CASR	P41180	1078 aa		10.5	□□□□□ -0.73
LMO7-204	ENST00000377499	TLE3	Q04726	772 aa		10.5	□□□□□ -0.73
LMO7-204	ENST00000377499	LTB	Q06643	244 aa		10.5	□□□□□ -0.73
LMO7-204	ENST00000377499	IL10RA	Q13651	578 aa		10.5	□□□□□ -0.73
LMO7-204	ENST00000377499	TMEM176B	Q3YBM2	270 aa	Predicted RBP	10.5	□□□□□ -0.73
LMO7-204	ENST00000377499	SFRP5	Q5T4F7	317 aa		10.5	□□□□□ -0.73
LMO7-204	ENST00000377499	NIPAL3	Q6P499	406 aa		10.5	□□□□□ -0.73
LMO7-204	ENST00000377499	ACBD7	Q8N6N7	88 aa		10.5	□□□□□ -0.73
LMO7-204	ENST00000377499	NXPE2	Q96DL1	559 aa		10.5	□□□□□ -0.73
LMO7-204	ENST00000377499	PRRX2	Q99811	253 aa		10.5	□□□□□ -0.73
LMO7-204	ENST00000377499	PIGQ	Q9BRB3	760 aa		10.5	□□□□□ -0.73
LMO7-204	ENST00000377499	BARHL1	Q9BZE3	327 aa		10.5	□□□□□ -0.73
LMO7-204	ENST00000377499	SLC6A5	Q9Y345	797 aa		10.5	□□□□□ -0.73
LMO7-204	ENST00000377499	KDM4E	B2RXH2	506 aa	Predicted RBP	10.5	□□□□□ -0.73
LMO7-204	ENST00000377499	SSNA1	O43805	119 aa		10.5	□□□□□ -0.73
LMO7-204	ENST00000377499	RAB3D	O95716	219 aa		10.5	□□□□□ -0.73
LMO7-204	ENST00000377499	PSMA1	P25786	263 aa	Known RBP	10.5	□□□□□ -0.73
LMO7-204	ENST00000377499	CYB561	P49447	251 aa		10.5	□□□□□ -0.73
LMO7-204	ENST00000377499	RGS6	P49758	472 aa		10.5	□□□□□ -0.73
LMO7-204	ENST00000377499	HCCS	P53701	268 aa		10.5	□□□□□ -0.73
LMO7-204	ENST00000377499	FABP9	Q0Z7S8	132 aa		10.5	□□□□□ -0.73
LMO7-204	ENST00000377499	MELK	Q14680	651 aa		10.5	□□□□□ -0.73
LMO7-204	ENST00000377499	RNASE12	Q5GAN4	147 aa	Known RBP	10.5	□□□□□ -0.73
LMO7-204	ENST00000377499	ZNF468	Q5VIY5	522 aa	Predicted RBP	10.5	□□□□□ -0.73
LMO7-204	ENST00000377499	LIPN	Q5VXI9	398 aa		10.5	□□□□□ -0.73
LMO7-204	ENST00000377499	C3P1	Q6ZMU1	363 aa		10.5	□□□□□ -0.73
LMO7-204	ENST00000377499	KLB	Q86Z14	1044 aa		10.5	□□□□□ -0.73
LMO7-204	ENST00000377499	SYT14	Q8NB59	555 aa		10.5	□□□□□ -0.73
LMO7-204	ENST00000377499	ST8SIA1	Q92185	356 aa		10.5	□□□□□ -0.73
LMO7-204	ENST00000377499	CCNL2	Q96S94	520 aa	Predicted RBP	10.5	□□□□□ -0.73
LMO7-204	ENST00000377499	CDCA4	Q9BXL8	241 aa		10.5	□□□□□ -0.73
LMO7-204	ENST00000377499	ASB6	Q9NWX5	421 aa		10.5	□□□□□ -0.73
LMO7-204	ENST00000377499	EXOSC1	Q9Y3B2	195 aa	Known RBP	10.5	□□□□□ -0.73
LMO7-204	ENST00000377499	OR6C68	A6NDL8	312 aa		10.49	□□□□□ -0.73
LMO7-204	ENST00000377499	C1orf196	B1AJZ1	125 aa		10.49	□□□□□ -0.73
LMO7-204	ENST00000377499	PSMD9	O00233	223 aa		10.49	□□□□□ -0.73
LMO7-204	ENST00000377499	GPX5	O75715	221 aa		10.49	□□□□□ -0.73
LMO7-204	ENST00000377499	ADRA2A	P08913	450 aa		10.49	□□□□□ -0.73
LMO7-204	ENST00000377499	PIP	P12273	146 aa	Predicted RBP	10.49	□□□□□ -0.73
LMO7-204	ENST00000377499	CEL	P19835	753 aa		10.49	□□□□□ -0.73
LMO7-204	ENST00000377499	MSX1	P28360	303 aa		10.49	□□□□□ -0.73
LMO7-204	ENST00000377499	RFC3	P40938	356 aa		10.49	□□□□□ -0.73
LMO7-204	ENST00000377499	ATP1A1-AS1	Q5TC04	95 aa		10.49	□□□□□ -0.73

Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms