RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 ZNF766Q5HY98 468 aa12.4□□□□□ -0.42
GPC6-201ENST00000377047 ZNF767PQ75MW2 155 aa12.4□□□□□ -0.42
GPC6-201ENST00000377047 OR2V1Q8NHB1 315 aa12.4□□□□□ -0.42
GPC6-201ENST00000377047 CD300AQ9UGN4 299 aa12.4□□□□□ -0.42
GPC6-201ENST00000377047 M0R296 226 aa12.4□□□□□ -0.42
GPC6-201ENST00000377047 TMEM92Q6UXU6 159 aa12.4□□□□□ -0.42
GPC6-201ENST00000377047 SMIM15Q7Z3B0 74 aa12.4□□□□□ -0.42
GPC6-201ENST00000377047 SPNS2Q8IVW8 549 aa12.4□□□□□ -0.42
GPC6-201ENST00000377047 ACOT8O14734 319 aa12.4□□□□□ -0.42
GPC6-201ENST00000377047 NPY4RP50391 375 aa12.4□□□□□ -0.42
GPC6-201ENST00000377047 SYT14P1Q58G82 188 aa12.4□□□□□ -0.42
GPC6-201ENST00000377047 LIPNQ5VXI9 398 aa12.4□□□□□ -0.42
GPC6-201ENST00000377047 OR2L13Q8N349 312 aa12.4□□□□□ -0.42
GPC6-201ENST00000377047 OR2I1PQ8NGU4 316 aa12.4□□□□□ -0.42
GPC6-201ENST00000377047 SLA2Q9H6Q3 261 aa12.4□□□□□ -0.42
GPC6-201ENST00000377047 A0A0B4J2A0 478 aa12.4□□□□□ -0.42
GPC6-201ENST00000377047 GLAP06280 429 aa12.4□□□□□ -0.42
GPC6-201ENST00000377047 IGFBP1P08833 259 aaPredicted RBP12.4□□□□□ -0.42
GPC6-201ENST00000377047 TRIP6Q15654 476 aaKnown RBP12.4□□□□□ -0.42
GPC6-201ENST00000377047 TMEM99Q8N816 258 aa12.4□□□□□ -0.42
GPC6-201ENST00000377047 SUMF1Q8NBK3 374 aa12.4□□□□□ -0.42
GPC6-201ENST00000377047 UBE2FQ969M7 185 aa12.4□□□□□ -0.42
GPC6-201ENST00000377047 SPACA9Q96E40 222 aaPredicted RBP12.4□□□□□ -0.42
GPC6-201ENST00000377047 ZNF419Q96HQ0 510 aaPredicted RBP12.4□□□□□ -0.42
GPC6-201ENST00000377047 UHRF2Q96PU4 802 aa12.4□□□□□ -0.42
GPC6-201ENST00000377047 FSCN3Q9NQT6 498 aa12.4□□□□□ -0.42
GPC6-201ENST00000377047 SHPKQ9UHJ6 478 aa12.4□□□□□ -0.42
GPC6-201ENST00000377047 EXO1Q9UQ84 846 aaKnown RBP12.4□□□□□ -0.42
GPC6-201ENST00000377047 PPM1DO15297 605 aa12.4□□□□□ -0.43
GPC6-201ENST00000377047 CSF3P09919 207 aa12.4□□□□□ -0.43
GPC6-201ENST00000377047 SRSF5Q13243 272 aaKnown RBP12.4□□□□□ -0.43
GPC6-201ENST00000377047 TRA2AQ13595 282 aaKnown RBP eCLIP12.4□□□□□ -0.43
GPC6-201ENST00000377047 ZNF74Q16587 644 aa12.4□□□□□ -0.43
GPC6-201ENST00000377047 LILRA6Q6PI73 481 aa12.4□□□□□ -0.43
GPC6-201ENST00000377047 C1orf87Q8N0U7 546 aa12.4□□□□□ -0.43
GPC6-201ENST00000377047 TMEM217Q8N7C4 229 aa12.4□□□□□ -0.43
GPC6-201ENST00000377047 OR56B4Q8NH76 319 aa12.4□□□□□ -0.43
GPC6-201ENST00000377047 GAB3Q8WWW8 586 aa12.4□□□□□ -0.43
GPC6-201ENST00000377047 KIAA1456Q9P272 454 aa12.4□□□□□ -0.43
GPC6-201ENST00000377047 COL18A1P39060 1754 aa12.39□□□□□ -0.43
GPC6-201ENST00000377047 PCSK6P29122 969 aa12.39□□□□□ -0.43
GPC6-201ENST00000377047 INSM1Q01101 510 aaPredicted RBP12.39□□□□□ -0.43
GPC6-201ENST00000377047 EIF3IQ13347 325 aaKnown RBP12.39□□□□□ -0.43
GPC6-201ENST00000377047 KCNJ8Q15842 424 aa12.39□□□□□ -0.43
GPC6-201ENST00000377047 NCCRP1Q6ZVX7 275 aaPredicted RBP12.39□□□□□ -0.43
GPC6-201ENST00000377047 ERVMER34-1Q9H9K5 563 aa12.39□□□□□ -0.43
GPC6-201ENST00000377047 TRGV5A0A0B4J1U4 118 aa12.39□□□□□ -0.43
GPC6-201ENST00000377047 IGHV1OR15-9A0A0B4J2B8 117 aa12.39□□□□□ -0.43
GPC6-201ENST00000377047 SBK2P0C263 348 aa12.39□□□□□ -0.43
GPC6-201ENST00000377047 B4GALT1P15291 398 aa12.39□□□□□ -0.43
GPC6-201ENST00000377047 ETV6P41212 452 aa12.39□□□□□ -0.43
GPC6-201ENST00000377047 DSCR4P56555 118 aaPredicted RBP12.39□□□□□ -0.43
GPC6-201ENST00000377047 B4GALNT1Q00973 533 aa12.39□□□□□ -0.43
GPC6-201ENST00000377047 FZD2Q14332 565 aa12.39□□□□□ -0.43
GPC6-201ENST00000377047 OR1M1Q8NGA1 313 aa12.39□□□□□ -0.43
GPC6-201ENST00000377047 LTBP4Q8N2S1 1624 aa12.39□□□□□ -0.43
GPC6-201ENST00000377047 SCN9AQ15858 1988 aa12.39□□□□□ -0.43
GPC6-201ENST00000377047 ABCD4O14678 606 aa12.39□□□□□ -0.43
GPC6-201ENST00000377047 COL9A1P20849 921 aa12.39□□□□□ -0.43
GPC6-201ENST00000377047 FABP6P51161 128 aa12.39□□□□□ -0.43
GPC6-201ENST00000377047 POU4F3Q15319 338 aa12.39□□□□□ -0.43
GPC6-201ENST00000377047 TMEM81Q6P7N7 255 aa12.39□□□□□ -0.43
GPC6-201ENST00000377047 LHFPL2Q6ZUX7 228 aa12.39□□□□□ -0.43
GPC6-201ENST00000377047 S1PR5Q9H228 398 aa12.39□□□□□ -0.43
GPC6-201ENST00000377047 RIMS4Q9H426 269 aaPredicted RBP12.39□□□□□ -0.43
GPC6-201ENST00000377047 METTL17Q9H7H0 456 aaPredicted RBP12.39□□□□□ -0.43
GPC6-201ENST00000377047 LRP5O75197 1615 aa12.39□□□□□ -0.43
GPC6-201ENST00000377047 LGALS8O00214 317 aa12.39□□□□□ -0.43
GPC6-201ENST00000377047 CLN5O75503 358 aa12.39□□□□□ -0.43
GPC6-201ENST00000377047 CLEC2LP0C7M8 214 aa12.39□□□□□ -0.43
GPC6-201ENST00000377047 AADACP22760 399 aa12.39□□□□□ -0.43
GPC6-201ENST00000377047 ZNF628Q5EBL2 1059 aa12.39□□□□□ -0.43
GPC6-201ENST00000377047 RBMS3Q6XE24 437 aaKnown RBP12.39□□□□□ -0.43
GPC6-201ENST00000377047 ZNF620Q6ZNG0 422 aa12.39□□□□□ -0.43
GPC6-201ENST00000377047 H2BFWTQ7Z2G1 175 aa12.39□□□□□ -0.43
GPC6-201ENST00000377047 DTWD2Q8NBA8 298 aa12.39□□□□□ -0.43
GPC6-201ENST00000377047 PLEKHF2Q9H8W4 249 aa12.39□□□□□ -0.43
GPC6-201ENST00000377047 C19orf12Q9NSK7 152 aa12.39□□□□□ -0.43
GPC6-201ENST00000377047 STRCQ7RTU9 1775 aa12.39□□□□□ -0.43
GPC6-201ENST00000377047 UBL3O95164 117 aa12.39□□□□□ -0.43
GPC6-201ENST00000377047 ARL16Q0P5N6 197 aa12.39□□□□□ -0.43
GPC6-201ENST00000377047 ZNF718Q3SXZ3 478 aa12.39□□□□□ -0.43
GPC6-201ENST00000377047 LAIR1Q6GTX8 287 aa12.39□□□□□ -0.43
GPC6-201ENST00000377047 CATSPERDQ86XM0 798 aa12.39□□□□□ -0.43
GPC6-201ENST00000377047 OR51H1Q8NH63 302 aa12.39□□□□□ -0.43
GPC6-201ENST00000377047 RHOXF1Q8NHV9 184 aa12.39□□□□□ -0.43
GPC6-201ENST00000377047 GPR119Q8TDV5 335 aa12.39□□□□□ -0.43
GPC6-201ENST00000377047 OPALINQ96PE5 141 aa12.39□□□□□ -0.43
GPC6-201ENST00000377047 TMEM43Q9BTV4 400 aa12.39□□□□□ -0.43
GPC6-201ENST00000377047 NUDT9Q9BW91 350 aa12.39□□□□□ -0.43
GPC6-201ENST00000377047 MOB1AQ9H8S9 216 aa12.39□□□□□ -0.43
GPC6-201ENST00000377047 KLK4Q9Y5K2 254 aa12.39□□□□□ -0.43
GPC6-201ENST00000377047 NRASP01111 189 aa12.38□□□□□ -0.43
GPC6-201ENST00000377047 CHRNB1P11230 501 aa12.38□□□□□ -0.43
GPC6-201ENST00000377047 PSMB1P20618 241 aaKnown RBP12.38□□□□□ -0.43
GPC6-201ENST00000377047 SERPINF1P36955 418 aa12.38□□□□□ -0.43
GPC6-201ENST00000377047 RPS27AP62979 156 aaKnown RBP12.38□□□□□ -0.43
GPC6-201ENST00000377047 UBA52P62987 128 aaKnown RBP12.38□□□□□ -0.43
GPC6-201ENST00000377047 EBPQ15125 230 aaKnown RBP12.38□□□□□ -0.43
GPC6-201ENST00000377047 CISD2Q8N5K1 135 aaKnown RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms