RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 LAMTOR1Q6IAA8 161 aa11.04□□□□□ -0.64
VRK3-202ENST00000377011 SEM1Q6ZVN7 128 aa11.04□□□□□ -0.64
VRK3-202ENST00000377011 MRGPRGQ86SM5 289 aa11.04□□□□□ -0.64
VRK3-202ENST00000377011 MARCH3Q86UD3 253 aa11.04□□□□□ -0.64
VRK3-202ENST00000377011 GLCCI1Q86VQ1 547 aa11.04□□□□□ -0.64
VRK3-202ENST00000377011 SLC35F2Q8IXU6 374 aa11.04□□□□□ -0.64
VRK3-202ENST00000377011 OR5J2Q8NH18 312 aa11.04□□□□□ -0.64
VRK3-202ENST00000377011 OR4C3Q8NH37 302 aa11.04□□□□□ -0.64
VRK3-202ENST00000377011 ARSGQ96EG1 525 aa11.04□□□□□ -0.64
VRK3-202ENST00000377011 TMEM41AQ96HV5 264 aa11.04□□□□□ -0.64
VRK3-202ENST00000377011 ERMAPQ96PL5 475 aaPredicted RBP11.04□□□□□ -0.64
VRK3-202ENST00000377011 GHITMQ9H3K2 345 aa11.04□□□□□ -0.64
VRK3-202ENST00000377011 NRIP3Q9NQ35 241 aa11.04□□□□□ -0.64
VRK3-202ENST00000377011 BOKQ9UMX3 212 aaPredicted RBP11.04□□□□□ -0.64
VRK3-202ENST00000377011 PKDREJQ9NTG1 2253 aa11.04□□□□□ -0.64
VRK3-202ENST00000377011 ARPC4-TTLL3A0A0A6YYG9 625 aa11.04□□□□□ -0.64
VRK3-202ENST00000377011 EEF1E1O43324 174 aaKnown RBP11.04□□□□□ -0.64
VRK3-202ENST00000377011 SNAPC5O75971 98 aa11.04□□□□□ -0.64
VRK3-202ENST00000377011 IL33O95760 270 aa11.04□□□□□ -0.64
VRK3-202ENST00000377011 TFPIP10646 304 aa11.04□□□□□ -0.64
VRK3-202ENST00000377011 EPXP11678 715 aa11.04□□□□□ -0.64
VRK3-202ENST00000377011 M6PRP20645 277 aa11.04□□□□□ -0.64
VRK3-202ENST00000377011 IL12BP29460 328 aa11.04□□□□□ -0.64
VRK3-202ENST00000377011 EVI2BP34910 448 aa11.04□□□□□ -0.64
VRK3-202ENST00000377011 PNLIPRP2P54317 469 aa11.04□□□□□ -0.64
VRK3-202ENST00000377011 OR10A3P58181 314 aa11.04□□□□□ -0.64
VRK3-202ENST00000377011 RBPJQ06330 500 aa11.04□□□□□ -0.64
VRK3-202ENST00000377011 CRYZQ08257 329 aaKnown RBP11.04□□□□□ -0.64
VRK3-202ENST00000377011 MADCAM1Q13477 382 aa11.04□□□□□ -0.64
VRK3-202ENST00000377011 PON3Q15166 354 aa11.04□□□□□ -0.64
VRK3-202ENST00000377011 SLC36A2Q495M3 483 aa11.04□□□□□ -0.64
VRK3-202ENST00000377011 ESCO2Q56NI9 601 aa11.04□□□□□ -0.64
VRK3-202ENST00000377011 ZNF585AQ6P3V2 769 aa11.04□□□□□ -0.64
VRK3-202ENST00000377011 TOMM5Q8N4H5 51 aa11.04□□□□□ -0.64
VRK3-202ENST00000377011 GATSQ8NAP1 163 aa11.04□□□□□ -0.64
VRK3-202ENST00000377011 OR52E2Q8NGJ4 325 aa11.04□□□□□ -0.64
VRK3-202ENST00000377011 OR5M1Q8NGP8 315 aa11.04□□□□□ -0.64
VRK3-202ENST00000377011 YIPF5Q969M3 257 aa11.04□□□□□ -0.64
VRK3-202ENST00000377011 ZNF524Q96C55 264 aa11.04□□□□□ -0.64
VRK3-202ENST00000377011 PELI1Q96FA3 418 aa11.04□□□□□ -0.64
VRK3-202ENST00000377011 ABHD1Q96SE0 405 aa11.04□□□□□ -0.64
VRK3-202ENST00000377011 PLEKHA1Q9HB21 404 aa11.04□□□□□ -0.64
VRK3-202ENST00000377011 Q9N2J8 555 aa11.04□□□□□ -0.64
VRK3-202ENST00000377011 ZNF337Q9Y3M9 751 aa11.04□□□□□ -0.64
VRK3-202ENST00000377011 HSPB11Q9Y547 144 aa11.04□□□□□ -0.64
VRK3-202ENST00000377011 WIF1Q9Y5W5 379 aa11.04□□□□□ -0.64
VRK3-202ENST00000377011 A0A087WUJ7 227 aa11.03□□□□□ -0.64
VRK3-202ENST00000377011 A0A0A6YYJ9 748 aa11.03□□□□□ -0.64
VRK3-202ENST00000377011 A0A1B0GVI7 797 aa11.03□□□□□ -0.64
VRK3-202ENST00000377011 SHISA8B8ZZ34 492 aa11.03□□□□□ -0.64
VRK3-202ENST00000377011 AQP7O14520 342 aa11.03□□□□□ -0.64
VRK3-202ENST00000377011 PRRG2O14669 202 aa11.03□□□□□ -0.64
VRK3-202ENST00000377011 OIP5O43482 229 aa11.03□□□□□ -0.64
VRK3-202ENST00000377011 LANCL1O43813 399 aa11.03□□□□□ -0.64
VRK3-202ENST00000377011 UTS2O95399 124 aa11.03□□□□□ -0.64
VRK3-202ENST00000377011 TFP02787 698 aa11.03□□□□□ -0.64
VRK3-202ENST00000377011 HPNP05981 417 aa11.03□□□□□ -0.64
VRK3-202ENST00000377011 APEHP13798 732 aaKnown RBP11.03□□□□□ -0.64
VRK3-202ENST00000377011 PTNP21246 168 aa11.03□□□□□ -0.64
VRK3-202ENST00000377011 ACVR1BP36896 505 aa11.03□□□□□ -0.64
VRK3-202ENST00000377011 ADH7P40394 386 aa11.03□□□□□ -0.64
VRK3-202ENST00000377011 STARP49675 285 aa11.03□□□□□ -0.64
VRK3-202ENST00000377011 PRPS1P60891 318 aa11.03□□□□□ -0.64
VRK3-202ENST00000377011 TOMM20Q15388 145 aa11.03□□□□□ -0.64
VRK3-202ENST00000377011 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.03□□□□□ -0.64
VRK3-202ENST00000377011 SLC25A35Q3KQZ1 300 aa11.03□□□□□ -0.64
VRK3-202ENST00000377011 CEP78Q5JTW2 689 aa11.03□□□□□ -0.64
VRK3-202ENST00000377011 UBE2NLQ5JXB2 153 aa11.03□□□□□ -0.64
VRK3-202ENST00000377011 FAM27D1Q5T7N8 215 aa11.03□□□□□ -0.64
VRK3-202ENST00000377011 TMEM81Q6P7N7 255 aa11.03□□□□□ -0.64
VRK3-202ENST00000377011 LUZP2Q86TE4 346 aa11.03□□□□□ -0.64
VRK3-202ENST00000377011 C9orf62Q8N4C0 152 aa11.03□□□□□ -0.64
VRK3-202ENST00000377011 CYB561A3Q8NBI2 242 aa11.03□□□□□ -0.64
VRK3-202ENST00000377011 OR1J4Q8NGS1 313 aa11.03□□□□□ -0.64
VRK3-202ENST00000377011 LIPHQ8WWY8 451 aa11.03□□□□□ -0.64
VRK3-202ENST00000377011 RADILQ96JH8 1075 aa11.03□□□□□ -0.64
VRK3-202ENST00000377011 NMNAT2Q9BZQ4 307 aa11.03□□□□□ -0.64
VRK3-202ENST00000377011 LDAHQ9H6V9 325 aa11.03□□□□□ -0.64
VRK3-202ENST00000377011 ACKR4Q9NPB9 350 aa11.03□□□□□ -0.64
VRK3-202ENST00000377011 ALKBH4Q9NXW9 302 aa11.03□□□□□ -0.64
VRK3-202ENST00000377011 MED11Q9P086 117 aa11.03□□□□□ -0.64
VRK3-202ENST00000377011 ARHGAP21Q5T5U3 1957 aa11.03□□□□□ -0.64
VRK3-202ENST00000377011 NAP1L6A6NFF2 107 aa11.02□□□□□ -0.65
VRK3-202ENST00000377011 IMPA2O14732 288 aa11.02□□□□□ -0.65
VRK3-202ENST00000377011 TOXO94900 526 aa11.02□□□□□ -0.65
VRK3-202ENST00000377011 TCRBP04435 133 aa11.02□□□□□ -0.65
VRK3-202ENST00000377011 NGFRP08138 427 aa11.02□□□□□ -0.65
VRK3-202ENST00000377011 CLUP10909 449 aa11.02□□□□□ -0.65
VRK3-202ENST00000377011 ANXA3P12429 323 aa11.02□□□□□ -0.65
VRK3-202ENST00000377011 GP1BBP13224 206 aa11.02□□□□□ -0.65
VRK3-202ENST00000377011 HIST1H1CP16403 213 aaKnown RBP11.02□□□□□ -0.65
VRK3-202ENST00000377011 ATF1P18846 271 aa11.02□□□□□ -0.65
VRK3-202ENST00000377011 SLC25A1P53007 311 aa11.02□□□□□ -0.65
VRK3-202ENST00000377011 AP2S1P53680 142 aaPredicted RBP11.02□□□□□ -0.65
VRK3-202ENST00000377011 RPS4XP62701 263 aaKnown RBP11.02□□□□□ -0.65
VRK3-202ENST00000377011 MRPS10P82664 201 aaKnown RBP11.02□□□□□ -0.65
VRK3-202ENST00000377011 FAM69AQ5T7M9 428 aa11.02□□□□□ -0.65
VRK3-202ENST00000377011 BTN2A1Q7KYR7 527 aa11.02□□□□□ -0.65
VRK3-202ENST00000377011 SSX6Q7RTT6 188 aa11.02□□□□□ -0.65
VRK3-202ENST00000377011 KCTD20Q7Z5Y7 419 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms