RNA–Protein interactions for RNA: ENST00000375759.7

SPEN-201, Transcript of spen family transcriptional repressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPEN, Length 12,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-201ENST00000375759 COL9A2Q14055 689 aaPredicted RBP9.02□□□□□ -0.96
SPEN-201ENST00000375759 SLC48A1Q6P1K1 146 aa9.02□□□□□ -0.96
SPEN-201ENST00000375759 LIN7CQ9NUP9 197 aaKnown RBP9.02□□□□□ -0.96
SPEN-201ENST00000375759 KCNG2Q9UJ96 466 aa9.02□□□□□ -0.96
SPEN-201ENST00000375759 FLVCR1Q9Y5Y0 555 aa9.02□□□□□ -0.96
SPEN-201ENST00000375759 ZBTB44Q8NCP5 570 aa9.02□□□□□ -0.96
SPEN-201ENST00000375759 TP53BP1Q12888 1972 aaPredicted RBP9.02□□□□□ -0.97
SPEN-201ENST00000375759 PAX6P26367 422 aa9.02□□□□□ -0.97
SPEN-201ENST00000375759 DMWDQ09019 674 aa9.02□□□□□ -0.97
SPEN-201ENST00000375759 OTUD1Q5VV17 481 aaPredicted RBP9.02□□□□□ -0.97
SPEN-201ENST00000375759 ADAMTSL4Q6UY14 1074 aa9.02□□□□□ -0.97
SPEN-201ENST00000375759 TCTE3Q8IZS6 198 aa9.02□□□□□ -0.97
SPEN-201ENST00000375759 TOE1Q96GM8 510 aaKnown RBP9.02□□□□□ -0.97
SPEN-201ENST00000375759 TPSD1Q9BZJ3 242 aa9.02□□□□□ -0.97
SPEN-201ENST00000375759 FCGR2CP31995 323 aa9.02□□□□□ -0.97
SPEN-201ENST00000375759 DCDP81605 110 aaKnown RBP9.02□□□□□ -0.97
SPEN-201ENST00000375759 CDK5Q00535 292 aa9.02□□□□□ -0.97
SPEN-201ENST00000375759 CTBSQ01459 385 aa9.02□□□□□ -0.97
SPEN-201ENST00000375759 H1FNTQ75WM6 255 aaPredicted RBP9.02□□□□□ -0.97
SPEN-201ENST00000375759 FUNDC1Q8IVP5 155 aa9.02□□□□□ -0.97
SPEN-201ENST00000375759 LRIT1Q9P2V4 623 aa9.02□□□□□ -0.97
SPEN-201ENST00000375759 ALOX5APP20292 161 aa9.02□□□□□ -0.97
SPEN-201ENST00000375759 TIGITQ495A1 244 aa9.02□□□□□ -0.97
SPEN-201ENST00000375759 AMIGO3Q86WK7 504 aa9.02□□□□□ -0.97
SPEN-201ENST00000375759 OR4C5Q8NGB2 326 aa9.02□□□□□ -0.97
SPEN-201ENST00000375759 UTP23Q9BRU9 249 aaKnown RBP9.02□□□□□ -0.97
SPEN-201ENST00000375759 H3BQ06 376 aaPredicted RBP9.02□□□□□ -0.97
SPEN-201ENST00000375759 PVRP15151 417 aa9.02□□□□□ -0.97
SPEN-201ENST00000375759 MMP11P24347 488 aa9.02□□□□□ -0.97
SPEN-201ENST00000375759 P2RX3P56373 397 aa9.02□□□□□ -0.97
SPEN-201ENST00000375759 OR10A3P58181 314 aa9.02□□□□□ -0.97
SPEN-201ENST00000375759 TMED6Q8WW62 240 aa9.02□□□□□ -0.97
SPEN-201ENST00000375759 CTRCQ99895 268 aa9.02□□□□□ -0.97
SPEN-201ENST00000375759 PARP12Q9H0J9 701 aaKnown RBP9.02□□□□□ -0.97
SPEN-201ENST00000375759 LYRM4Q9HD34 91 aa9.02□□□□□ -0.97
SPEN-201ENST00000375759 ZNF814B7Z6K7 855 aa9.02□□□□□ -0.97
SPEN-201ENST00000375759 ARSAP15289 507 aa9.02□□□□□ -0.97
SPEN-201ENST00000375759 PFN4Q8NHR9 129 aa9.02□□□□□ -0.97
SPEN-201ENST00000375759 SMIM19Q96E16 107 aa9.02□□□□□ -0.97
SPEN-201ENST00000375759 SPNS1Q9H2V7 528 aa9.02□□□□□ -0.97
SPEN-201ENST00000375759 BCO1Q9HAY6 547 aa9.02□□□□□ -0.97
SPEN-201ENST00000375759 GABRQQ9UN88 632 aa9.02□□□□□ -0.97
SPEN-201ENST00000375759 ARRDC5A6NEK1 342 aa9.02□□□□□ -0.97
SPEN-201ENST00000375759 RFPL4AA6NLU0 287 aa9.02□□□□□ -0.97
SPEN-201ENST00000375759 RFPL4AL1F8VTS6 287 aa9.02□□□□□ -0.97
SPEN-201ENST00000375759 HOXD9P28356 352 aaPredicted RBP9.02□□□□□ -0.97
SPEN-201ENST00000375759 AGBL4Q5VU57 503 aa9.02□□□□□ -0.97
SPEN-201ENST00000375759 SLC24A4Q8NFF2 622 aa9.02□□□□□ -0.97
SPEN-201ENST00000375759 MED18Q9BUE0 208 aa9.02□□□□□ -0.97
SPEN-201ENST00000375759 SUCNR1Q9BXA5 334 aa9.02□□□□□ -0.97
SPEN-201ENST00000375759 MBLAC1A4D2B0 266 aaPredicted RBP9.02□□□□□ -0.97
SPEN-201ENST00000375759 GPR171O14626 319 aa9.02□□□□□ -0.97
SPEN-201ENST00000375759 ZNF354AO60765 605 aaPredicted RBP9.02□□□□□ -0.97
SPEN-201ENST00000375759 RPL12P30050 165 aaKnown RBP9.02□□□□□ -0.97
SPEN-201ENST00000375759 IQCJQ1A5X6 159 aa9.02□□□□□ -0.97
SPEN-201ENST00000375759 GDPD3Q7L5L3 318 aa9.02□□□□□ -0.97
SPEN-201ENST00000375759 GRINAQ7Z429 371 aa9.02□□□□□ -0.97
SPEN-201ENST00000375759 CTDSP1Q9GZU7 261 aa9.02□□□□□ -0.97
SPEN-201ENST00000375759 MCM3APO60318 1980 aa9.02□□□□□ -0.97
SPEN-201ENST00000375759 CNIH1O95406 144 aa9.02□□□□□ -0.97
SPEN-201ENST00000375759 COL13A1Q5TAT6 717 aaPredicted RBP9.02□□□□□ -0.97
SPEN-201ENST00000375759 ZNF511Q8NB15 262 aa9.02□□□□□ -0.97
SPEN-201ENST00000375759 OR13D1Q8NGV5 346 aa9.02□□□□□ -0.97
SPEN-201ENST00000375759 WNT11O96014 354 aa9.01□□□□□ -0.97
SPEN-201ENST00000375759 IGFBP1P08833 259 aaPredicted RBP9.01□□□□□ -0.97
SPEN-201ENST00000375759 CD38P28907 300 aa9.01□□□□□ -0.97
SPEN-201ENST00000375759 SAXO2Q658L1 398 aa9.01□□□□□ -0.97
SPEN-201ENST00000375759 BCDIN3DQ7Z5W3 292 aaKnown RBP9.01□□□□□ -0.97
SPEN-201ENST00000375759 TVP23CQ96ET8 276 aa9.01□□□□□ -0.97
SPEN-201ENST00000375759 DCBLD2Q96PD2 775 aa9.01□□□□□ -0.97
SPEN-201ENST00000375759 TEAD3Q99594 435 aa9.01□□□□□ -0.97
SPEN-201ENST00000375759 CRYM-AS1A6NIL9 109 aa9.01□□□□□ -0.97
SPEN-201ENST00000375759 DOK2O60496 412 aa9.01□□□□□ -0.97
SPEN-201ENST00000375759 SELEP16581 610 aa9.01□□□□□ -0.97
SPEN-201ENST00000375759 CEBPBP17676 345 aa9.01□□□□□ -0.97
SPEN-201ENST00000375759 GP2P55259 537 aaKnown RBP9.01□□□□□ -0.97
SPEN-201ENST00000375759 SEMA3BQ13214 749 aa9.01□□□□□ -0.97
SPEN-201ENST00000375759 MFSD12Q6NUT3 480 aa9.01□□□□□ -0.97
SPEN-201ENST00000375759 VHLLQ6RSH7 139 aa9.01□□□□□ -0.97
SPEN-201ENST00000375759 NECAP1Q8NC96 275 aa9.01□□□□□ -0.97
SPEN-201ENST00000375759 NDFIP1Q9BT67 221 aa9.01□□□□□ -0.97
SPEN-201ENST00000375759 NID1P14543 1247 aa9.01□□□□□ -0.97
SPEN-201ENST00000375759 HLA-FP30511 346 aa9.01□□□□□ -0.97
SPEN-201ENST00000375759 RPL7L1Q6DKI1 246 aaKnown RBP9.01□□□□□ -0.97
SPEN-201ENST00000375759 RHOUQ7L0Q8 258 aa9.01□□□□□ -0.97
SPEN-201ENST00000375759 ZFP62Q8NB50 900 aaPredicted RBP9.01□□□□□ -0.97
SPEN-201ENST00000375759 SLC38A9Q8NBW4 561 aa9.01□□□□□ -0.97
SPEN-201ENST00000375759 ATP13A2Q9NQ11 1180 aa9.01□□□□□ -0.97
SPEN-201ENST00000375759 GJB3O75712 270 aa9.01□□□□□ -0.97
SPEN-201ENST00000375759 TMEM11P17152 192 aa9.01□□□□□ -0.97
SPEN-201ENST00000375759 C9orf135Q5VTT2 229 aa9.01□□□□□ -0.97
SPEN-201ENST00000375759 CPEB2Q7Z5Q1 589 aaKnown RBP9.01□□□□□ -0.97
SPEN-201ENST00000375759 CIB3Q96Q77 187 aaPredicted RBP9.01□□□□□ -0.97
SPEN-201ENST00000375759 TOLLIPQ9H0E2 274 aa9.01□□□□□ -0.97
SPEN-201ENST00000375759 LAMP3Q9UQV4 416 aa9.01□□□□□ -0.97
SPEN-201ENST00000375759 APC2O95996 2303 aa9.01□□□□□ -0.97
SPEN-201ENST00000375759 CCSO14618 274 aa9.01□□□□□ -0.97
SPEN-201ENST00000375759 EVX1P49640 407 aa9.01□□□□□ -0.97
SPEN-201ENST00000375759 PTTG1IPP53801 180 aa9.01□□□□□ -0.97
SPEN-201ENST00000375759 EXOSC2Q13868 293 aaKnown RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms