RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 SLC41A2Q96JW4 573 aa12.7□□□□□ -0.38
CLCNKA-202ENST00000375692 NECAB3Q96P71 396 aaPredicted RBP12.7□□□□□ -0.38
CLCNKA-202ENST00000375692 OR8B4Q96RC9 309 aa12.7□□□□□ -0.38
CLCNKA-202ENST00000375692 CMKLR1Q99788 373 aa12.7□□□□□ -0.38
CLCNKA-202ENST00000375692 RTN4RQ9BZR6 473 aa12.7□□□□□ -0.38
CLCNKA-202ENST00000375692 DNTTIP1Q9H147 329 aa12.7□□□□□ -0.38
CLCNKA-202ENST00000375692 PRTFDC1Q9NRG1 225 aa12.7□□□□□ -0.38
CLCNKA-202ENST00000375692 B9D1Q9UPM9 204 aa12.7□□□□□ -0.38
CLCNKA-202ENST00000375692 TMEM14AQ9Y6G1 99 aa12.7□□□□□ -0.38
CLCNKA-202ENST00000375692 NUP210LQ5VU65 1888 aa12.69□□□□□ -0.38
CLCNKA-202ENST00000375692 TMEM235A6NFC5 223 aa12.69□□□□□ -0.38
CLCNKA-202ENST00000375692 ZNF736B4DX44 427 aaPredicted RBP12.69□□□□□ -0.38
CLCNKA-202ENST00000375692 CYB5AP00167 134 aa12.69□□□□□ -0.38
CLCNKA-202ENST00000375692 PDGFBP01127 241 aaPredicted RBP12.69□□□□□ -0.38
CLCNKA-202ENST00000375692 MAOBP27338 520 aa12.69□□□□□ -0.38
CLCNKA-202ENST00000375692 HTR2CP28335 458 aa12.69□□□□□ -0.38
CLCNKA-202ENST00000375692 DLSTP36957 453 aa12.69□□□□□ -0.38
CLCNKA-202ENST00000375692 PPIAP62937 165 aaKnown RBP12.69□□□□□ -0.38
CLCNKA-202ENST00000375692 CORO6Q6QEF8 472 aa12.69□□□□□ -0.38
CLCNKA-202ENST00000375692 UNQ6126/PRO20091Q6UXV3 157 aa12.69□□□□□ -0.38
CLCNKA-202ENST00000375692 Q6ZSR6 202 aa12.69□□□□□ -0.38
CLCNKA-202ENST00000375692 RHOUQ7L0Q8 258 aa12.69□□□□□ -0.38
CLCNKA-202ENST00000375692 FAM174AQ8TBP5 190 aa12.69□□□□□ -0.38
CLCNKA-202ENST00000375692 LIPHQ8WWY8 451 aa12.69□□□□□ -0.38
CLCNKA-202ENST00000375692 ZBTB8AQ96BR9 441 aa12.69□□□□□ -0.38
CLCNKA-202ENST00000375692 SLC25A21Q9BQT8 299 aaPredicted RBP12.69□□□□□ -0.38
CLCNKA-202ENST00000375692 KLK13Q9UKR3 277 aa12.69□□□□□ -0.38
CLCNKA-202ENST00000375692 DHDHQ9UQ10 334 aa12.69□□□□□ -0.38
CLCNKA-202ENST00000375692 VSIG4Q9Y279 399 aa12.69□□□□□ -0.38
CLCNKA-202ENST00000375692 NCOR1O75376 2440 aa12.69□□□□□ -0.38
CLCNKA-202ENST00000375692 A0A1B0GW55 424 aa12.69□□□□□ -0.38
CLCNKA-202ENST00000375692 BCL2L11O43521 198 aa12.69□□□□□ -0.38
CLCNKA-202ENST00000375692 DUX4L2P0CJ85 424 aa12.69□□□□□ -0.38
CLCNKA-202ENST00000375692 DUX4L3P0CJ86 424 aa12.69□□□□□ -0.38
CLCNKA-202ENST00000375692 DUX4L4P0CJ87 422 aa12.69□□□□□ -0.38
CLCNKA-202ENST00000375692 DUX4L5P0CJ88 424 aa12.69□□□□□ -0.38
CLCNKA-202ENST00000375692 DUX4L6P0CJ89 424 aa12.69□□□□□ -0.38
CLCNKA-202ENST00000375692 DUX4L7P0CJ90 424 aa12.69□□□□□ -0.38
CLCNKA-202ENST00000375692 RNH1P13489 461 aaKnown RBP12.69□□□□□ -0.38
CLCNKA-202ENST00000375692 SPOCK1Q08629 439 aa12.69□□□□□ -0.38
CLCNKA-202ENST00000375692 PRR22Q8IZ63 422 aa12.69□□□□□ -0.38
CLCNKA-202ENST00000375692 ZNF615Q8N8J6 731 aa12.69□□□□□ -0.38
CLCNKA-202ENST00000375692 OR13H1Q8NG92 308 aa12.69□□□□□ -0.38
CLCNKA-202ENST00000375692 ASB5Q8WWX0 329 aa12.69□□□□□ -0.38
CLCNKA-202ENST00000375692 SLC25A36Q96CQ1 311 aa12.69□□□□□ -0.38
CLCNKA-202ENST00000375692 COMMD9Q9P000 198 aa12.69□□□□□ -0.38
CLCNKA-202ENST00000375692 DUX4Q9UBX2 424 aa12.69□□□□□ -0.38
CLCNKA-202ENST00000375692 PCDHB10Q9UN67 800 aa12.69□□□□□ -0.38
CLCNKA-202ENST00000375692 MRPS17Q9Y2R5 130 aaKnown RBP12.69□□□□□ -0.38
CLCNKA-202ENST00000375692 ZDBF2Q9HCK1 2354 aa12.68□□□□□ -0.38
CLCNKA-202ENST00000375692 ABCD4O14678 606 aa12.68□□□□□ -0.38
CLCNKA-202ENST00000375692 MELTFP08582 738 aa12.68□□□□□ -0.38
CLCNKA-202ENST00000375692 BDKRB2P30411 391 aa12.68□□□□□ -0.38
CLCNKA-202ENST00000375692 AVPR2P30518 371 aa12.68□□□□□ -0.38
CLCNKA-202ENST00000375692 FGL1Q08830 312 aa12.68□□□□□ -0.38
CLCNKA-202ENST00000375692 PMPCAQ10713 525 aa12.68□□□□□ -0.38
CLCNKA-202ENST00000375692 TOMM34Q15785 309 aaPredicted RBP12.68□□□□□ -0.38
CLCNKA-202ENST00000375692 STK11Q15831 433 aa12.68□□□□□ -0.38
CLCNKA-202ENST00000375692 SLC22A6Q4U2R8 563 aa12.68□□□□□ -0.38
CLCNKA-202ENST00000375692 FNDC7Q5VTL7 733 aa12.68□□□□□ -0.38
CLCNKA-202ENST00000375692 ARHGEF39Q8N4T4 335 aa12.68□□□□□ -0.38
CLCNKA-202ENST00000375692 JAGN1Q8N5M9 183 aa12.68□□□□□ -0.38
CLCNKA-202ENST00000375692 SLC37A2Q8TED4 501 aa12.68□□□□□ -0.38
CLCNKA-202ENST00000375692 FAM117AQ9C073 453 aa12.68□□□□□ -0.38
CLCNKA-202ENST00000375692 ASF1BQ9NVP2 202 aa12.68□□□□□ -0.38
CLCNKA-202ENST00000375692 SLC39A1Q9NY26 324 aa12.68□□□□□ -0.38
CLCNKA-202ENST00000375692 PURGQ9UJV8 347 aaKnown RBP12.68□□□□□ -0.38
CLCNKA-202ENST00000375692 PRELID3BQ9Y3B1 194 aa12.68□□□□□ -0.38
CLCNKA-202ENST00000375692 IGHV1OR15-9A0A0B4J2B8 117 aa12.68□□□□□ -0.38
CLCNKA-202ENST00000375692 C19orf67A6NJJ6 358 aa12.68□□□□□ -0.38
CLCNKA-202ENST00000375692 LMX1BO60663 402 aa12.68□□□□□ -0.38
CLCNKA-202ENST00000375692 SLC16A7O60669 478 aa12.68□□□□□ -0.38
CLCNKA-202ENST00000375692 OR2F2O95006 317 aa12.68□□□□□ -0.38
CLCNKA-202ENST00000375692 RPL35P42766 123 aaKnown RBP12.68□□□□□ -0.38
CLCNKA-202ENST00000375692 OR2F1Q13607 317 aa12.68□□□□□ -0.38
CLCNKA-202ENST00000375692 SNTB1Q13884 538 aaKnown RBP12.68□□□□□ -0.38
CLCNKA-202ENST00000375692 GUCA2BQ16661 112 aa12.68□□□□□ -0.38
CLCNKA-202ENST00000375692 EMC4Q5J8M3 183 aa12.68□□□□□ -0.38
CLCNKA-202ENST00000375692 SHEQ5VZ18 495 aa12.68□□□□□ -0.38
CLCNKA-202ENST00000375692 SLC22A18ASQ8N1D0 253 aa12.68□□□□□ -0.38
CLCNKA-202ENST00000375692 ACBD4Q8NC06 268 aa12.68□□□□□ -0.38
CLCNKA-202ENST00000375692 ASB13Q8WXK3 278 aa12.68□□□□□ -0.38
CLCNKA-202ENST00000375692 CMBLQ96DG6 245 aa12.68□□□□□ -0.38
CLCNKA-202ENST00000375692 SHDQ96IW2 340 aa12.68□□□□□ -0.38
CLCNKA-202ENST00000375692 CST11Q9H112 138 aa12.68□□□□□ -0.38
CLCNKA-202ENST00000375692 SLC17A5Q9NRA2 495 aa12.68□□□□□ -0.38
CLCNKA-202ENST00000375692 UBQLN4Q9NRR5 601 aa12.68□□□□□ -0.38
CLCNKA-202ENST00000375692 MRPL22Q9NWU5 206 aaKnown RBP12.68□□□□□ -0.38
CLCNKA-202ENST00000375692 TMED7Q9Y3B3 224 aa12.68□□□□□ -0.38
CLCNKA-202ENST00000375692 KIF26BQ2KJY2 2108 aa12.67□□□□□ -0.38
CLCNKA-202ENST00000375692 DISC1C4P0D8 188 aa12.67□□□□□ -0.38
CLCNKA-202ENST00000375692 F5H0A9 414 aaPredicted RBP12.67□□□□□ -0.38
CLCNKA-202ENST00000375692 ZNF264O43296 627 aa12.67□□□□□ -0.38
CLCNKA-202ENST00000375692 SIGLEC6O43699 453 aa12.67□□□□□ -0.38
CLCNKA-202ENST00000375692 MPZL1O95297 269 aa12.67□□□□□ -0.38
CLCNKA-202ENST00000375692 HOXC4P09017 264 aaPredicted RBP12.67□□□□□ -0.38
CLCNKA-202ENST00000375692 CFPP27918 469 aa12.67□□□□□ -0.38
CLCNKA-202ENST00000375692 SKP1P63208 163 aa12.67□□□□□ -0.38
CLCNKA-202ENST00000375692 CXADRP78310 365 aa12.67□□□□□ -0.38
CLCNKA-202ENST00000375692 SSBP1Q04837 148 aaKnown RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms