RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 PRKXP51817 358 aa9.99□□□□□ -0.81
CCDC40-203ENST00000374877 ERV3-1Q14264 604 aa9.99□□□□□ -0.81
CCDC40-203ENST00000374877 ACOT7LQ6ZUV0 252 aa9.99□□□□□ -0.81
CCDC40-203ENST00000374877 LDLRAD3Q86YD5 345 aa9.99□□□□□ -0.81
CCDC40-203ENST00000374877 PM20D2Q8IYS1 436 aa9.99□□□□□ -0.81
CCDC40-203ENST00000374877 FRMD1Q8N878 549 aa9.99□□□□□ -0.81
CCDC40-203ENST00000374877 TMEM229BQ8NBD8 167 aa9.99□□□□□ -0.81
CCDC40-203ENST00000374877 INO80EQ8NBZ0 244 aaPredicted RBP9.99□□□□□ -0.81
CCDC40-203ENST00000374877 GPBAR1Q8TDU6 330 aa9.99□□□□□ -0.81
CCDC40-203ENST00000374877 TSPAN32Q96QS1 320 aa9.99□□□□□ -0.81
CCDC40-203ENST00000374877 CMKLR1Q99788 373 aa9.99□□□□□ -0.81
CCDC40-203ENST00000374877 TMEM14AQ9Y6G1 99 aa9.99□□□□□ -0.81
CCDC40-203ENST00000374877 A0A1W2PR77 199 aa9.99□□□□□ -0.81
CCDC40-203ENST00000374877 FITM1A5D6W6 292 aa9.99□□□□□ -0.81
CCDC40-203ENST00000374877 TMEM235A6NFC5 223 aa9.99□□□□□ -0.81
CCDC40-203ENST00000374877 NPIPB9F8W1W9 429 aa9.99□□□□□ -0.81
CCDC40-203ENST00000374877 BLKP51451 505 aa9.99□□□□□ -0.81
CCDC40-203ENST00000374877 ADAM8P78325 824 aa9.99□□□□□ -0.81
CCDC40-203ENST00000374877 EGR3Q06889 387 aa9.99□□□□□ -0.81
CCDC40-203ENST00000374877 DMWDQ09019 674 aa9.99□□□□□ -0.81
CCDC40-203ENST00000374877 FZD2Q14332 565 aa9.99□□□□□ -0.81
CCDC40-203ENST00000374877 ZNF345Q14585 488 aa9.99□□□□□ -0.81
CCDC40-203ENST00000374877 RHOUQ7L0Q8 258 aa9.99□□□□□ -0.81
CCDC40-203ENST00000374877 THAP6Q8TBB0 222 aa9.99□□□□□ -0.81
CCDC40-203ENST00000374877 PHOSPHO1Q8TCT1 267 aa9.99□□□□□ -0.81
CCDC40-203ENST00000374877 PAQR8Q8TEZ7 354 aa9.99□□□□□ -0.81
CCDC40-203ENST00000374877 SLC6A7Q99884 636 aa9.99□□□□□ -0.81
CCDC40-203ENST00000374877 MMP25Q9NPA2 562 aa9.99□□□□□ -0.81
CCDC40-203ENST00000374877 DHDHQ9UQ10 334 aa9.99□□□□□ -0.81
CCDC40-203ENST00000374877 A0A1B0GTI1 187 aa9.98□□□□□ -0.81
CCDC40-203ENST00000374877 A6NCN8 305 aa9.98□□□□□ -0.81
CCDC40-203ENST00000374877 EEF1E1-BLOC1S5C9J1V9 151 aa9.98□□□□□ -0.81
CCDC40-203ENST00000374877 C11orf98E9PRG8 122 aa9.98□□□□□ -0.81
CCDC40-203ENST00000374877 F8W036 122 aa9.98□□□□□ -0.81
CCDC40-203ENST00000374877 HTR2CP28335 458 aa9.98□□□□□ -0.81
CCDC40-203ENST00000374877 CASRP41180 1078 aa9.98□□□□□ -0.81
CCDC40-203ENST00000374877 RAB38P57729 211 aa9.98□□□□□ -0.81
CCDC40-203ENST00000374877 BLOC1S1P78537 153 aa9.98□□□□□ -0.81
CCDC40-203ENST00000374877 SSBP1Q04837 148 aaKnown RBP9.98□□□□□ -0.81
CCDC40-203ENST00000374877 SERTAD2Q14140 314 aa9.98□□□□□ -0.81
CCDC40-203ENST00000374877 HFEQ30201 348 aa9.98□□□□□ -0.81
CCDC40-203ENST00000374877 KCTD9Q7L273 389 aa9.98□□□□□ -0.81
CCDC40-203ENST00000374877 RAB11FIP2Q7L804 512 aa9.98□□□□□ -0.81
CCDC40-203ENST00000374877 PARGQ86W56 976 aa9.98□□□□□ -0.81
CCDC40-203ENST00000374877 JAGN1Q8N5M9 183 aa9.98□□□□□ -0.81
CCDC40-203ENST00000374877 BCORP1Q8N888 145 aa9.98□□□□□ -0.81
CCDC40-203ENST00000374877 SLC19A3Q9BZV2 496 aa9.98□□□□□ -0.81
CCDC40-203ENST00000374877 DUSP15Q9H1R2 295 aaPredicted RBP9.98□□□□□ -0.81
CCDC40-203ENST00000374877 CKLFQ9UBR5 152 aa9.98□□□□□ -0.81
CCDC40-203ENST00000374877 KLF2Q9Y5W3 355 aaPredicted RBP9.98□□□□□ -0.81
CCDC40-203ENST00000374877 OIP5O43482 229 aa9.98□□□□□ -0.81
CCDC40-203ENST00000374877 HCRTR1O43613 425 aa9.98□□□□□ -0.81
CCDC40-203ENST00000374877 F12P00748 615 aaPredicted RBP9.98□□□□□ -0.81
CCDC40-203ENST00000374877 CTSBP07858 339 aa9.98□□□□□ -0.81
CCDC40-203ENST00000374877 VAMP1P23763 118 aa9.98□□□□□ -0.81
CCDC40-203ENST00000374877 AVPR2P30518 371 aa9.98□□□□□ -0.81
CCDC40-203ENST00000374877 CXADRP78310 365 aa9.98□□□□□ -0.81
CCDC40-203ENST00000374877 SCRN3Q0VDG4 424 aa9.98□□□□□ -0.81
CCDC40-203ENST00000374877 SQSTM1Q13501 440 aa9.98□□□□□ -0.81
CCDC40-203ENST00000374877 OR7A5Q15622 319 aa9.98□□□□□ -0.81
CCDC40-203ENST00000374877 CDNFQ49AH0 187 aa9.98□□□□□ -0.81
CCDC40-203ENST00000374877 CBLN3Q6UW01 205 aa9.98□□□□□ -0.81
CCDC40-203ENST00000374877 WDR5BQ86VZ2 330 aa9.98□□□□□ -0.81
CCDC40-203ENST00000374877 ZNF761Q86XN6 746 aaPredicted RBP9.98□□□□□ -0.81
CCDC40-203ENST00000374877 ZNF584Q8IVC4 421 aa9.98□□□□□ -0.81
CCDC40-203ENST00000374877 GTPBP8Q8N3Z3 284 aaPredicted RBP9.98□□□□□ -0.81
CCDC40-203ENST00000374877 LRRC75AQ8NAA5 344 aa9.98□□□□□ -0.81
CCDC40-203ENST00000374877 DNASE2BQ8WZ79 361 aa9.98□□□□□ -0.81
CCDC40-203ENST00000374877 PHYHIPLQ96FC7 376 aa9.98□□□□□ -0.81
CCDC40-203ENST00000374877 USB1Q9BQ65 265 aaKnown RBP9.98□□□□□ -0.81
CCDC40-203ENST00000374877 FAM117AQ9C073 453 aa9.98□□□□□ -0.81
CCDC40-203ENST00000374877 TAS2R4Q9NYW5 299 aa9.98□□□□□ -0.81
CCDC40-203ENST00000374877 MBD2Q9UBB5 411 aa9.98□□□□□ -0.81
CCDC40-203ENST00000374877 PLGP00747 810 aaPredicted RBP9.98□□□□□ -0.81
CCDC40-203ENST00000374877 SPARCP09486 303 aa9.98□□□□□ -0.81
CCDC40-203ENST00000374877 CD38P28907 300 aa9.98□□□□□ -0.81
CCDC40-203ENST00000374877 CBX5P45973 191 aa9.98□□□□□ -0.81
CCDC40-203ENST00000374877 HOXA1P49639 335 aaPredicted RBP9.98□□□□□ -0.81
CCDC40-203ENST00000374877 B2MP61769 119 aa9.98□□□□□ -0.81
CCDC40-203ENST00000374877 PPP1CAP62136 330 aa9.98□□□□□ -0.81
CCDC40-203ENST00000374877 TMEM225Q6GV28 225 aa9.98□□□□□ -0.81
CCDC40-203ENST00000374877 WBP2NLQ6ICG8 309 aa9.98□□□□□ -0.81
CCDC40-203ENST00000374877 LPCAT3Q6P1A2 487 aa9.98□□□□□ -0.81
CCDC40-203ENST00000374877 TMEM71Q6P5X7 295 aa9.98□□□□□ -0.81
CCDC40-203ENST00000374877 SPAG16Q8N0X2 631 aa9.98□□□□□ -0.81
CCDC40-203ENST00000374877 OR13C8Q8NGS7 320 aa9.98□□□□□ -0.81
CCDC40-203ENST00000374877 BAHD1Q8TBE0 780 aaPredicted RBP9.98□□□□□ -0.81
CCDC40-203ENST00000374877 KTI12Q96EK9 354 aaPredicted RBP9.98□□□□□ -0.81
CCDC40-203ENST00000374877 HRASLS2Q9NWW9 162 aa9.98□□□□□ -0.81
CCDC40-203ENST00000374877 EPHA6Q9UF33 1036 aa9.98□□□□□ -0.81
CCDC40-203ENST00000374877 OR6A2O95222 327 aa9.97□□□□□ -0.81
CCDC40-203ENST00000374877 PNPP00491 289 aa9.97□□□□□ -0.81
CCDC40-203ENST00000374877 CT45A8P0DMV1 189 aa9.97□□□□□ -0.81
CCDC40-203ENST00000374877 CT45A9P0DMV2 189 aa9.97□□□□□ -0.81
CCDC40-203ENST00000374877 SLC25A4P12235 298 aa9.97□□□□□ -0.81
CCDC40-203ENST00000374877 TDGF1P13385 188 aa9.97□□□□□ -0.81
CCDC40-203ENST00000374877 APEHP13798 732 aaKnown RBP9.97□□□□□ -0.81
CCDC40-203ENST00000374877 ADCYAP1P18509 176 aa9.97□□□□□ -0.81
CCDC40-203ENST00000374877 PPP1R1AQ13522 171 aa9.97□□□□□ -0.81
CCDC40-203ENST00000374877 CD226Q15762 336 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms