RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 BTF3L4Q96K17 158 aa13.1□□□□□ -0.31
TRAF1-201ENST00000373887 C20orf27Q9GZN8 174 aa13.1□□□□□ -0.31
TRAF1-201ENST00000373887 EVPLQ92817 2033 aa13.1□□□□□ -0.31
TRAF1-201ENST00000373887 GPRIN2O60269 458 aa13.1□□□□□ -0.31
TRAF1-201ENST00000373887 ST6GAL1P15907 406 aa13.1□□□□□ -0.31
TRAF1-201ENST00000373887 METAP1P53582 386 aa13.1□□□□□ -0.31
TRAF1-201ENST00000373887 OR4F5Q8NH21 305 aa13.1□□□□□ -0.31
TRAF1-201ENST00000373887 OR4F4Q96R69 305 aa13.1□□□□□ -0.31
TRAF1-201ENST00000373887 RYDENQ9NUL5 291 aaKnown RBP13.1□□□□□ -0.31
TRAF1-201ENST00000373887 LRRC30A6NM36 301 aa13.1□□□□□ -0.31
TRAF1-201ENST00000373887 H0YIV9 168 aa13.1□□□□□ -0.31
TRAF1-201ENST00000373887 CSF3P09919 207 aa13.1□□□□□ -0.31
TRAF1-201ENST00000373887 GLI4P10075 376 aa13.1□□□□□ -0.31
TRAF1-201ENST00000373887 GNB2P62879 340 aa13.1□□□□□ -0.31
TRAF1-201ENST00000373887 FOXK2Q01167 660 aa13.1□□□□□ -0.31
TRAF1-201ENST00000373887 CRMP1Q14194 572 aa13.1□□□□□ -0.31
TRAF1-201ENST00000373887 C4orf17Q53FE4 359 aa13.1□□□□□ -0.31
TRAF1-201ENST00000373887 PRAMEF5Q5TYX0 476 aa13.1□□□□□ -0.31
TRAF1-201ENST00000373887 PRAMEF6Q5VXH4 476 aa13.1□□□□□ -0.31
TRAF1-201ENST00000373887 ZNF511Q8NB15 262 aa13.1□□□□□ -0.31
TRAF1-201ENST00000373887 OR5M11Q96RB7 305 aa13.1□□□□□ -0.31
TRAF1-201ENST00000373887 CDX2Q99626 313 aaPredicted RBP13.1□□□□□ -0.31
TRAF1-201ENST00000373887 ACSS1Q9NUB1 689 aaPredicted RBP13.1□□□□□ -0.31
TRAF1-201ENST00000373887 GPR55Q9Y2T6 319 aaPredicted RBP13.1□□□□□ -0.31
TRAF1-201ENST00000373887 AKR7A3O95154 331 aa13.1□□□□□ -0.31
TRAF1-201ENST00000373887 POLR2IP36954 125 aaKnown RBP13.1□□□□□ -0.31
TRAF1-201ENST00000373887 SRSF5Q13243 272 aaKnown RBP13.1□□□□□ -0.31
TRAF1-201ENST00000373887 ZNF239Q16600 458 aaKnown RBP13.1□□□□□ -0.31
TRAF1-201ENST00000373887 ZMAT1Q5H9K5 638 aa13.1□□□□□ -0.31
TRAF1-201ENST00000373887 ADGRE4PQ86SQ3 457 aa13.1□□□□□ -0.31
TRAF1-201ENST00000373887 ZFP62Q8NB50 900 aaPredicted RBP13.1□□□□□ -0.31
TRAF1-201ENST00000373887 OR2I1PQ8NGU4 316 aa13.1□□□□□ -0.31
TRAF1-201ENST00000373887 A0A1W2PPH5 198 aa13.09□□□□□ -0.31
TRAF1-201ENST00000373887 DCTN6O00399 190 aa13.09□□□□□ -0.31
TRAF1-201ENST00000373887 SLC16A6O15403 523 aa13.09□□□□□ -0.31
TRAF1-201ENST00000373887 KLK10O43240 276 aa13.09□□□□□ -0.31
TRAF1-201ENST00000373887 ALPLP05186 524 aa13.09□□□□□ -0.31
TRAF1-201ENST00000373887 CT45A10P0DMU9 189 aa13.09□□□□□ -0.31
TRAF1-201ENST00000373887 ETV6P41212 452 aa13.09□□□□□ -0.31
TRAF1-201ENST00000373887 BTG2P78543 158 aa13.09□□□□□ -0.31
TRAF1-201ENST00000373887 EXT1Q16394 746 aa13.09□□□□□ -0.31
TRAF1-201ENST00000373887 TRMT12Q53H54 448 aaKnown RBP13.09□□□□□ -0.31
TRAF1-201ENST00000373887 ABHD17CQ6PCB6 329 aa13.09□□□□□ -0.31
TRAF1-201ENST00000373887 LRRC56Q8IYG6 542 aaPredicted RBP13.09□□□□□ -0.31
TRAF1-201ENST00000373887 APH1BQ8WW43 257 aa13.09□□□□□ -0.31
TRAF1-201ENST00000373887 SLC35E1Q96K37 410 aa13.09□□□□□ -0.31
TRAF1-201ENST00000373887 NKX6-2Q9C056 277 aaPredicted RBP13.09□□□□□ -0.31
TRAF1-201ENST00000373887 B3GAT1Q9P2W7 334 aa13.09□□□□□ -0.31
TRAF1-201ENST00000373887 A0A1W2PPC4 97 aa13.09□□□□□ -0.31
TRAF1-201ENST00000373887 PLRG1O43660 514 aaKnown RBP13.09□□□□□ -0.31
TRAF1-201ENST00000373887 ICMTO60725 284 aa13.09□□□□□ -0.31
TRAF1-201ENST00000373887 RGS11O94810 467 aa13.09□□□□□ -0.31
TRAF1-201ENST00000373887 MTNR1BP49286 362 aa13.09□□□□□ -0.31
TRAF1-201ENST00000373887 YOD1Q5VVQ6 348 aaPredicted RBP13.09□□□□□ -0.31
TRAF1-201ENST00000373887 AFMIDQ63HM1 303 aa13.09□□□□□ -0.31
TRAF1-201ENST00000373887 RPS19BP1Q86WX3 136 aaKnown RBP13.09□□□□□ -0.31
TRAF1-201ENST00000373887 OR51S1Q8NGJ8 323 aa13.09□□□□□ -0.31
TRAF1-201ENST00000373887 PFN4Q8NHR9 129 aa13.09□□□□□ -0.31
TRAF1-201ENST00000373887 SLC35B4Q969S0 331 aa13.09□□□□□ -0.31
TRAF1-201ENST00000373887 APH1AQ96BI3 265 aa13.09□□□□□ -0.31
TRAF1-201ENST00000373887 KIRREL1Q96J84 757 aa13.09□□□□□ -0.31
TRAF1-201ENST00000373887 SLC46A1Q96NT5 459 aa13.09□□□□□ -0.31
TRAF1-201ENST00000373887 BARHL1Q9BZE3 327 aa13.09□□□□□ -0.31
TRAF1-201ENST00000373887 ADAM29Q9UKF5 820 aa13.09□□□□□ -0.31
TRAF1-201ENST00000373887 OR51B4Q9Y5P0 310 aa13.09□□□□□ -0.31
TRAF1-201ENST00000373887 PIPP12273 146 aaPredicted RBP13.09□□□□□ -0.31
TRAF1-201ENST00000373887 MYBPHQ13203 477 aa13.09□□□□□ -0.31
TRAF1-201ENST00000373887 VAMP3Q15836 100 aa13.09□□□□□ -0.31
TRAF1-201ENST00000373887 RNF113BQ8IZP6 322 aaKnown RBP13.09□□□□□ -0.31
TRAF1-201ENST00000373887 TSLPQ969D9 159 aa13.09□□□□□ -0.31
TRAF1-201ENST00000373887 OR2W5A6NFC9 320 aa13.09□□□□□ -0.31
TRAF1-201ENST00000373887 CTNSO60931 367 aa13.09□□□□□ -0.31
TRAF1-201ENST00000373887 CPN1P15169 458 aa13.09□□□□□ -0.31
TRAF1-201ENST00000373887 MRPL58Q14197 206 aaKnown RBP13.09□□□□□ -0.31
TRAF1-201ENST00000373887 SOWAHCQ53LP3 525 aaPredicted RBP13.09□□□□□ -0.31
TRAF1-201ENST00000373887 TRILQ7L0X0 811 aa13.09□□□□□ -0.31
TRAF1-201ENST00000373887 ANGPTL5Q86XS5 388 aa13.09□□□□□ -0.31
TRAF1-201ENST00000373887 SPEM1Q8N4L4 309 aa13.09□□□□□ -0.31
TRAF1-201ENST00000373887 UFSP2Q9NUQ7 469 aa13.09□□□□□ -0.31
TRAF1-201ENST00000373887 PPP5D1E7EU14 171 aa13.09□□□□□ -0.31
TRAF1-201ENST00000373887 OR5G3P0C626 314 aa13.09□□□□□ -0.31
TRAF1-201ENST00000373887 SLC51BQ86UW2 128 aa13.09□□□□□ -0.31
TRAF1-201ENST00000373887 AKR1E2Q96JD6 320 aa13.09□□□□□ -0.31
TRAF1-201ENST00000373887 SOX7Q9BT81 388 aa13.09□□□□□ -0.31
TRAF1-201ENST00000373887 RIMS4Q9H426 269 aaPredicted RBP13.09□□□□□ -0.31
TRAF1-201ENST00000373887 PLEKHF2Q9H8W4 249 aa13.09□□□□□ -0.31
TRAF1-201ENST00000373887 RBFOX1Q9NWB1 397 aaKnown RBP13.09□□□□□ -0.31
TRAF1-201ENST00000373887 CSAG2Q9Y5P2 127 aa13.09□□□□□ -0.31
TRAF1-201ENST00000373887 SLC35E2P0CK97 266 aa13.08□□□□□ -0.31
TRAF1-201ENST00000373887 CGB2Q6NT52 195 aa13.08□□□□□ -0.31
TRAF1-201ENST00000373887 FAM122BQ7Z309 247 aa13.08□□□□□ -0.31
TRAF1-201ENST00000373887 ZMAT5Q9UDW3 170 aaKnown RBP13.08□□□□□ -0.31
TRAF1-201ENST00000373887 IDSB3KWA1 339 aa13.08□□□□□ -0.32
TRAF1-201ENST00000373887 ABCD4O14678 606 aa13.08□□□□□ -0.32
TRAF1-201ENST00000373887 SRMP19623 302 aa13.08□□□□□ -0.32
TRAF1-201ENST00000373887 PPIAP62937 165 aaKnown RBP13.08□□□□□ -0.32
TRAF1-201ENST00000373887 SLC48A1Q6P1K1 146 aa13.08□□□□□ -0.32
TRAF1-201ENST00000373887 RHOUQ7L0Q8 258 aa13.08□□□□□ -0.32
TRAF1-201ENST00000373887 DHRS9Q9BPW9 319 aa13.08□□□□□ -0.32
TRAF1-201ENST00000373887 DHRS4Q9BTZ2 278 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms