RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 QDPRP09417 244 aa10.54□□□□□ -0.72
VCL-202ENST00000372755 TRAPPC2P0DI81 140 aa10.54□□□□□ -0.72
VCL-202ENST00000372755 TRAPPC2BP0DI82 140 aa10.54□□□□□ -0.72
VCL-202ENST00000372755 NID1P14543 1247 aa10.54□□□□□ -0.72
VCL-202ENST00000372755 AFMIDQ63HM1 303 aa10.54□□□□□ -0.72
VCL-202ENST00000372755 SLC38A9Q8NBW4 561 aa10.54□□□□□ -0.72
VCL-202ENST00000372755 OR5M1Q8NGP8 315 aa10.54□□□□□ -0.72
VCL-202ENST00000372755 OR5B3Q8NH48 314 aa10.54□□□□□ -0.72
VCL-202ENST00000372755 M1APQ8TC57 530 aa10.54□□□□□ -0.72
VCL-202ENST00000372755 IFI44Q8TCB0 444 aa10.54□□□□□ -0.72
VCL-202ENST00000372755 APH1BQ8WW43 257 aa10.54□□□□□ -0.72
VCL-202ENST00000372755 PDXPQ96GD0 296 aa10.54□□□□□ -0.72
VCL-202ENST00000372755 PDCD1LG2Q9BQ51 273 aa10.54□□□□□ -0.72
VCL-202ENST00000372755 CACFD1Q9UGQ2 172 aa10.54□□□□□ -0.72
VCL-202ENST00000372755 HOXC11O43248 304 aaPredicted RBP10.54□□□□□ -0.72
VCL-202ENST00000372755 XRCC2O43543 280 aa10.54□□□□□ -0.72
VCL-202ENST00000372755 JTBO76095 146 aa10.54□□□□□ -0.72
VCL-202ENST00000372755 OR2F2O95006 317 aa10.54□□□□□ -0.72
VCL-202ENST00000372755 YIF1AO95070 293 aa10.54□□□□□ -0.72
VCL-202ENST00000372755 SBK2P0C263 348 aa10.54□□□□□ -0.72
VCL-202ENST00000372755 AGFG1P52594 562 aaKnown RBP10.54□□□□□ -0.72
VCL-202ENST00000372755 HCCSP53701 268 aa10.54□□□□□ -0.72
VCL-202ENST00000372755 OR2F1Q13607 317 aa10.54□□□□□ -0.72
VCL-202ENST00000372755 DOC2BQ14184 412 aa10.54□□□□□ -0.72
VCL-202ENST00000372755 CAMKMTQ7Z624 323 aa10.54□□□□□ -0.72
VCL-202ENST00000372755 ZNF573Q86YE8 665 aa10.54□□□□□ -0.72
VCL-202ENST00000372755 LYSMD2Q8IV50 215 aa10.54□□□□□ -0.72
VCL-202ENST00000372755 ZNF321PQ8N8H1 164 aa10.54□□□□□ -0.72
VCL-202ENST00000372755 MORN4Q8NDC4 146 aa10.54□□□□□ -0.72
VCL-202ENST00000372755 OR51E1Q8TCB6 317 aa10.54□□□□□ -0.72
VCL-202ENST00000372755 S1PR3Q99500 378 aa10.54□□□□□ -0.72
VCL-202ENST00000372755 ZNF2Q9BSG1 426 aaPredicted RBP10.54□□□□□ -0.72
VCL-202ENST00000372755 DLL4Q9NR61 685 aa10.54□□□□□ -0.72
VCL-202ENST00000372755 CLEC2DQ9UHP7 191 aa10.54□□□□□ -0.72
VCL-202ENST00000372755 RNF150Q9ULK6 438 aa10.54□□□□□ -0.72
VCL-202ENST00000372755 HSPB2A8KAH6 182 aa10.54□□□□□ -0.72
VCL-202ENST00000372755 ZNF724A8MTY0 619 aa10.54□□□□□ -0.72
VCL-202ENST00000372755 ACOT8O14734 319 aa10.54□□□□□ -0.72
VCL-202ENST00000372755 SIX6O95475 246 aa10.54□□□□□ -0.72
VCL-202ENST00000372755 SDHAP31040 664 aa10.54□□□□□ -0.72
VCL-202ENST00000372755 LIPAP38571 399 aa10.54□□□□□ -0.72
VCL-202ENST00000372755 HSPB2Q16082 182 aa10.54□□□□□ -0.72
VCL-202ENST00000372755 FAM185AQ8N0U4 392 aa10.54□□□□□ -0.72
VCL-202ENST00000372755 SLC37A2Q8TED4 501 aa10.54□□□□□ -0.72
VCL-202ENST00000372755 SARAFQ96BY9 339 aa10.54□□□□□ -0.72
VCL-202ENST00000372755 NRSN2Q9GZP1 204 aa10.54□□□□□ -0.72
VCL-202ENST00000372755 LIN7CQ9NUP9 197 aaKnown RBP10.54□□□□□ -0.72
VCL-202ENST00000372755 IGHV3-20A0A0C4DH32 117 aa10.54□□□□□ -0.72
VCL-202ENST00000372755 ZBTB42B2RXF5 422 aa10.54□□□□□ -0.72
VCL-202ENST00000372755 KIAA0141Q14154 515 aaPredicted RBP10.54□□□□□ -0.72
VCL-202ENST00000372755 OR6C68A6NDL8 312 aa10.54□□□□□ -0.72
VCL-202ENST00000372755 PDGFAP04085 211 aa10.54□□□□□ -0.72
VCL-202ENST00000372755 GUSBP08236 651 aa10.54□□□□□ -0.72
VCL-202ENST00000372755 IGFBP1P08833 259 aaPredicted RBP10.54□□□□□ -0.72
VCL-202ENST00000372755 CD22P20273 847 aa10.54□□□□□ -0.72
VCL-202ENST00000372755 ACOT6Q3I5F7 207 aaPredicted RBP10.54□□□□□ -0.72
VCL-202ENST00000372755 YRDCQ86U90 279 aaKnown RBP10.54□□□□□ -0.72
VCL-202ENST00000372755 ACTR3CQ9C0K3 210 aaPredicted RBP10.54□□□□□ -0.72
VCL-202ENST00000372755 NDUFB11Q9NX14 153 aa10.54□□□□□ -0.72
VCL-202ENST00000372755 FLVCR1Q9Y5Y0 555 aa10.54□□□□□ -0.72
VCL-202ENST00000372755 ZNF816-ZNF321PA0A0X1KG74 233 aa10.53□□□□□ -0.72
VCL-202ENST00000372755 IGHV3-9P01782 118 aa10.53□□□□□ -0.72
VCL-202ENST00000372755 MBP02144 154 aa10.53□□□□□ -0.72
VCL-202ENST00000372755 RICTORQ6R327 1708 aa10.53□□□□□ -0.72
VCL-202ENST00000372755 A0A1B0GVG6 124 aa10.53□□□□□ -0.72
VCL-202ENST00000372755 H7BYZ3 331 aa10.53□□□□□ -0.72
VCL-202ENST00000372755 ALOX5APP20292 161 aa10.53□□□□□ -0.72
VCL-202ENST00000372755 GLRA1P23415 457 aa10.53□□□□□ -0.72
VCL-202ENST00000372755 ERHP84090 104 aaKnown RBP10.53□□□□□ -0.72
VCL-202ENST00000372755 SYT14P1Q58G82 188 aa10.53□□□□□ -0.72
VCL-202ENST00000372755 LIPNQ5VXI9 398 aa10.53□□□□□ -0.72
VCL-202ENST00000372755 NKAIN4Q8IVV8 208 aa10.53□□□□□ -0.72
VCL-202ENST00000372755 SPPL3Q8TCT6 385 aa10.53□□□□□ -0.72
VCL-202ENST00000372755 ZNRF4Q8WWF5 429 aa10.53□□□□□ -0.72
VCL-202ENST00000372755 CSAG2Q9Y5P2 127 aa10.53□□□□□ -0.72
VCL-202ENST00000372755 MYH2Q9UKX2 1941 aa10.53□□□□□ -0.72
VCL-202ENST00000372755 NALCNQ8IZF0 1738 aa10.53□□□□□ -0.72
VCL-202ENST00000372755 SPI1P17947 270 aa10.53□□□□□ -0.72
VCL-202ENST00000372755 SRP9P49458 86 aaKnown RBP10.53□□□□□ -0.72
VCL-202ENST00000372755 ZNF239Q16600 458 aaKnown RBP10.53□□□□□ -0.72
VCL-202ENST00000372755 TIGITQ495A1 244 aa10.53□□□□□ -0.72
VCL-202ENST00000372755 TRMT12Q53H54 448 aaKnown RBP10.53□□□□□ -0.72
VCL-202ENST00000372755 ZNF628Q5EBL2 1059 aa10.53□□□□□ -0.72
VCL-202ENST00000372755 TOR2AQ5JU69 321 aa10.53□□□□□ -0.72
VCL-202ENST00000372755 OR10G3Q8NGC4 313 aa10.53□□□□□ -0.72
VCL-202ENST00000372755 PCNPQ8WW12 178 aaKnown RBP10.53□□□□□ -0.72
VCL-202ENST00000372755 ZIC5Q96T25 663 aa10.53□□□□□ -0.72
VCL-202ENST00000372755 PRR14Q9BWN1 585 aa10.53□□□□□ -0.72
VCL-202ENST00000372755 FITM1A5D6W6 292 aa10.53□□□□□ -0.72
VCL-202ENST00000372755 SMLR1H3BR10 107 aa10.53□□□□□ -0.72
VCL-202ENST00000372755 TGOLN2O43493 480 aa10.53□□□□□ -0.72
VCL-202ENST00000372755 KLKB1P03952 638 aa10.53□□□□□ -0.72
VCL-202ENST00000372755 CPEP16870 476 aa10.53□□□□□ -0.72
VCL-202ENST00000372755 ZNF26P17031 533 aaPredicted RBP10.53□□□□□ -0.72
VCL-202ENST00000372755 ADPRHP54922 357 aa10.53□□□□□ -0.72
VCL-202ENST00000372755 ZNF90Q03938 601 aa10.53□□□□□ -0.72
VCL-202ENST00000372755 CCSMST1Q4G0I0 132 aa10.53□□□□□ -0.72
VCL-202ENST00000372755 PYCR3Q53H96 274 aa10.53□□□□□ -0.72
VCL-202ENST00000372755 PRSS45Q7RTY3 260 aa10.53□□□□□ -0.72
VCL-202ENST00000372755 LSRQ86X29 649 aaPredicted RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms