RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 GEMIN6Q8WXD5 167 aaKnown RBP8□□□□□ -1.13
ATG4A-203ENST00000372232 FGF13Q92913 245 aa8□□□□□ -1.13
ATG4A-203ENST00000372232 MR1Q95460 341 aa8□□□□□ -1.13
ATG4A-203ENST00000372232 CXorf40BQ96DE9 158 aa8□□□□□ -1.13
ATG4A-203ENST00000372232 SAT2Q96F10 170 aaPredicted RBP8□□□□□ -1.13
ATG4A-203ENST00000372232 PACRGQ96M98 296 aaPredicted RBP8□□□□□ -1.13
ATG4A-203ENST00000372232 IP6K3Q96PC2 410 aa8□□□□□ -1.13
ATG4A-203ENST00000372232 KCNE5Q9UJ90 142 aa8□□□□□ -1.13
ATG4A-203ENST00000372232 PCYT1BQ9Y5K3 369 aaPredicted RBP8□□□□□ -1.13
ATG4A-203ENST00000372232 ENPP4Q9Y6X5 453 aa8□□□□□ -1.13
ATG4A-203ENST00000372232 TRANK1O15050 2925 aa8□□□□□ -1.13
ATG4A-203ENST00000372232 HSFX4A0A1B0GTS1 333 aaPredicted RBP8□□□□□ -1.13
ATG4A-203ENST00000372232 HSFX3A0A1B0GWH4 333 aaPredicted RBP8□□□□□ -1.13
ATG4A-203ENST00000372232 A0A1W2PPC4 97 aa8□□□□□ -1.13
ATG4A-203ENST00000372232 SMCO3A2RU48 225 aa8□□□□□ -1.13
ATG4A-203ENST00000372232 ANKRD61A6NGH8 418 aa8□□□□□ -1.13
ATG4A-203ENST00000372232 A6NNC1 897 aa8□□□□□ -1.13
ATG4A-203ENST00000372232 C9JQL5 133 aa8□□□□□ -1.13
ATG4A-203ENST00000372232 H3BN98 237 aa8□□□□□ -1.13
ATG4A-203ENST00000372232 RNASET2O00584 256 aaKnown RBP8□□□□□ -1.13
ATG4A-203ENST00000372232 TNFRSF6BO95407 300 aa8□□□□□ -1.13
ATG4A-203ENST00000372232 F13BP05160 661 aa8□□□□□ -1.13
ATG4A-203ENST00000372232 GZMBP10144 247 aa8□□□□□ -1.13
ATG4A-203ENST00000372232 TPT1P13693 172 aaKnown RBP8□□□□□ -1.13
ATG4A-203ENST00000372232 PPIBP23284 216 aaKnown RBP8□□□□□ -1.13
ATG4A-203ENST00000372232 GABRR1P24046 479 aa8□□□□□ -1.13
ATG4A-203ENST00000372232 DLSTP36957 453 aa8□□□□□ -1.13
ATG4A-203ENST00000372232 WNT5AP41221 380 aa8□□□□□ -1.13
ATG4A-203ENST00000372232 P2RY2P41231 377 aa8□□□□□ -1.13
ATG4A-203ENST00000372232 SULT1A1P50225 295 aa8□□□□□ -1.13
ATG4A-203ENST00000372232 RAP1BP61224 184 aa8□□□□□ -1.13
ATG4A-203ENST00000372232 ZNF763Q0D2J5 394 aa8□□□□□ -1.13
ATG4A-203ENST00000372232 RAB35Q15286 201 aa8□□□□□ -1.13
ATG4A-203ENST00000372232 RHEBQ15382 184 aa8□□□□□ -1.13
ATG4A-203ENST00000372232 RGNQ15493 299 aa8□□□□□ -1.13
ATG4A-203ENST00000372232 MAPK14Q16539 360 aa8□□□□□ -1.13
ATG4A-203ENST00000372232 LY6G6FQ5SQ64 297 aa8□□□□□ -1.13
ATG4A-203ENST00000372232 ZNF620Q6ZNG0 422 aa8□□□□□ -1.13
ATG4A-203ENST00000372232 FAM83HQ6ZRV2 1179 aaPredicted RBP8□□□□□ -1.13
ATG4A-203ENST00000372232 HIST2H3AQ71DI3 136 aa8□□□□□ -1.13
ATG4A-203ENST00000372232 NUDT10Q8NFP7 164 aa8□□□□□ -1.13
ATG4A-203ENST00000372232 OR2L3Q8NG85 312 aa8□□□□□ -1.13
ATG4A-203ENST00000372232 OR7G2Q8NG99 324 aa8□□□□□ -1.13
ATG4A-203ENST00000372232 OR10R2Q8NGX6 335 aa8□□□□□ -1.13
ATG4A-203ENST00000372232 GPR148Q8TDV2 347 aa8□□□□□ -1.13
ATG4A-203ENST00000372232 WDR92Q96MX6 357 aa8□□□□□ -1.13
ATG4A-203ENST00000372232 OR5B2Q96R09 309 aa8□□□□□ -1.13
ATG4A-203ENST00000372232 OR14A2Q96R54 314 aa8□□□□□ -1.13
ATG4A-203ENST00000372232 ZNF649Q9BS31 505 aa8□□□□□ -1.13
ATG4A-203ENST00000372232 SYT4Q9H2B2 425 aa8□□□□□ -1.13
ATG4A-203ENST00000372232 LPAR3Q9UBY5 353 aa8□□□□□ -1.13
ATG4A-203ENST00000372232 TCFL5Q9UL49 500 aa8□□□□□ -1.13
ATG4A-203ENST00000372232 A4GNTQ9UNA3 340 aa8□□□□□ -1.13
ATG4A-203ENST00000372232 ANTXRLA6NF34 631 aa7.99□□□□□ -1.13
ATG4A-203ENST00000372232 FAM171A2A8MVW0 826 aa7.99□□□□□ -1.13
ATG4A-203ENST00000372232 K7EP13 123 aa7.99□□□□□ -1.13
ATG4A-203ENST00000372232 SAP18O00422 153 aaKnown RBP7.99□□□□□ -1.13
ATG4A-203ENST00000372232 TCF21O43680 179 aa7.99□□□□□ -1.13
ATG4A-203ENST00000372232 TGFB1P01137 390 aa7.99□□□□□ -1.13
ATG4A-203ENST00000372232 PPBPP02775 128 aa7.99□□□□□ -1.13
ATG4A-203ENST00000372232 OPN1SWP03999 348 aa7.99□□□□□ -1.13
ATG4A-203ENST00000372232 GBAP04062 536 aa7.99□□□□□ -1.13
ATG4A-203ENST00000372232 FABP4P15090 132 aa7.99□□□□□ -1.13
ATG4A-203ENST00000372232 OR3A1P47881 315 aa7.99□□□□□ -1.13
ATG4A-203ENST00000372232 MTNR1AP48039 350 aa7.99□□□□□ -1.13
ATG4A-203ENST00000372232 UBE2MP61081 183 aaKnown RBP7.99□□□□□ -1.13
ATG4A-203ENST00000372232 DCAF7P61962 342 aa7.99□□□□□ -1.13
ATG4A-203ENST00000372232 ZNF385BQ569K4 471 aa7.99□□□□□ -1.13
ATG4A-203ENST00000372232 VWA2Q5GFL6 755 aa7.99□□□□□ -1.13
ATG4A-203ENST00000372232 GFI1BQ5VTD9 330 aa7.99□□□□□ -1.13
ATG4A-203ENST00000372232 CXXC5Q7LFL8 322 aaKnown RBP7.99□□□□□ -1.13
ATG4A-203ENST00000372232 BAP18Q8IXM2 172 aa7.99□□□□□ -1.13
ATG4A-203ENST00000372232 GCNT2Q8N0V5 402 aa7.99□□□□□ -1.13
ATG4A-203ENST00000372232 BEST3Q8N1M1 668 aa7.99□□□□□ -1.13
ATG4A-203ENST00000372232 HORMAD2Q8N7B1 307 aa7.99□□□□□ -1.13
ATG4A-203ENST00000372232 OR5D16Q8NGK9 328 aa7.99□□□□□ -1.13
ATG4A-203ENST00000372232 OR9A4Q8NGU2 314 aa7.99□□□□□ -1.13
ATG4A-203ENST00000372232 OR52I2Q8NH67 350 aa7.99□□□□□ -1.13
ATG4A-203ENST00000372232 BRIX1Q8TDN6 353 aaKnown RBP7.99□□□□□ -1.13
ATG4A-203ENST00000372232 CXorf40AQ8TE69 158 aa7.99□□□□□ -1.13
ATG4A-203ENST00000372232 TNFAIP8L1Q8WVP5 186 aa7.99□□□□□ -1.13
ATG4A-203ENST00000372232 OIT3Q8WWZ8 545 aa7.99□□□□□ -1.13
ATG4A-203ENST00000372232 SUSD6Q92537 303 aa7.99□□□□□ -1.13
ATG4A-203ENST00000372232 RNF166Q96A37 237 aaPredicted RBP7.99□□□□□ -1.13
ATG4A-203ENST00000372232 PIK3IP1Q96FE7 263 aa7.99□□□□□ -1.13
ATG4A-203ENST00000372232 KIRREL1Q96J84 757 aa7.99□□□□□ -1.13
ATG4A-203ENST00000372232 SULT4A1Q9BR01 284 aa7.99□□□□□ -1.13
ATG4A-203ENST00000372232 TRPV4Q9HBA0 871 aa7.99□□□□□ -1.13
ATG4A-203ENST00000372232 PRSS16Q9NQE7 514 aa7.99□□□□□ -1.13
ATG4A-203ENST00000372232 ZNF282Q9UDV7 671 aaPredicted RBP7.99□□□□□ -1.13
ATG4A-203ENST00000372232 NUP214P35658 2090 aaPredicted RBP7.99□□□□□ -1.13
ATG4A-203ENST00000372232 OR5H14A6NHG9 310 aa7.98□□□□□ -1.13
ATG4A-203ENST00000372232 C1QTNF3-AMACRE9PGA6 284 aa7.98□□□□□ -1.13
ATG4A-203ENST00000372232 HIST1H2BKO60814 126 aa7.98□□□□□ -1.13
ATG4A-203ENST00000372232 ADAP1O75689 374 aa7.98□□□□□ -1.13
ATG4A-203ENST00000372232 HIST1H2BJP06899 126 aa7.98□□□□□ -1.13
ATG4A-203ENST00000372232 CA3P07451 260 aa7.98□□□□□ -1.13
ATG4A-203ENST00000372232 FCGR3AP08637 254 aa7.98□□□□□ -1.13
ATG4A-203ENST00000372232 HIST1H2BOP23527 126 aa7.98□□□□□ -1.13
ATG4A-203ENST00000372232 HIST1H2BBP33778 126 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms