RNA–Protein interactions for RNA: ENST00000368662.9

TUBE1-202, Transcript of tubulin epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBE1, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-202ENST00000368662 IKZF2Q9UKS7 526 aa10.82□□□□□ -0.68
TUBE1-202ENST00000368662 KLHDC2Q9Y2U9 406 aa10.82□□□□□ -0.68
TUBE1-202ENST00000368662 PHF3Q92576 2039 aaKnown RBP10.82□□□□□ -0.68
TUBE1-202ENST00000368662 FREM1Q5H8C1 2179 aa10.82□□□□□ -0.68
TUBE1-202ENST00000368662 SHANK1Q9Y566 2161 aa10.82□□□□□ -0.68
TUBE1-202ENST00000368662 PSKH1P11801 424 aa10.81□□□□□ -0.68
TUBE1-202ENST00000368662 GBX2P52951 348 aaPredicted RBP10.81□□□□□ -0.68
TUBE1-202ENST00000368662 OR12D2P58182 307 aa10.81□□□□□ -0.68
TUBE1-202ENST00000368662 SCRN3Q0VDG4 424 aa10.81□□□□□ -0.68
TUBE1-202ENST00000368662 ENDOGQ14249 297 aaKnown RBP10.81□□□□□ -0.68
TUBE1-202ENST00000368662 TP53I3Q53FA7 332 aa10.81□□□□□ -0.68
TUBE1-202ENST00000368662 OTPQ5XKR4 325 aa10.81□□□□□ -0.68
TUBE1-202ENST00000368662 ANKRD16Q6P6B7 361 aa10.81□□□□□ -0.68
TUBE1-202ENST00000368662 VASH1Q7L8A9 365 aaPredicted RBP10.81□□□□□ -0.68
TUBE1-202ENST00000368662 SLC16A14Q7RTX9 510 aa10.81□□□□□ -0.68
TUBE1-202ENST00000368662 SATL1Q86VE3 508 aa10.81□□□□□ -0.68
TUBE1-202ENST00000368662 ISG20L2Q9H9L3 353 aaKnown RBP10.81□□□□□ -0.68
TUBE1-202ENST00000368662 SH3BGRL2Q9UJC5 107 aa10.81□□□□□ -0.68
TUBE1-202ENST00000368662 INTS1Q8N201 2190 aaKnown RBP10.81□□□□□ -0.68
TUBE1-202ENST00000368662 SMIM31A0A1B0GVY4 71 aa10.81□□□□□ -0.68
TUBE1-202ENST00000368662 ZNF878C9JN71 531 aa10.81□□□□□ -0.68
TUBE1-202ENST00000368662 ITGA5P08648 1049 aa10.81□□□□□ -0.68
TUBE1-202ENST00000368662 P2RY6Q15077 328 aa10.81□□□□□ -0.68
TUBE1-202ENST00000368662 SLC36A2Q495M3 483 aa10.81□□□□□ -0.68
TUBE1-202ENST00000368662 CCDC58Q4VC31 144 aa10.81□□□□□ -0.68
TUBE1-202ENST00000368662 CORO6Q6QEF8 472 aa10.81□□□□□ -0.68
TUBE1-202ENST00000368662 KLBQ86Z14 1044 aa10.81□□□□□ -0.68
TUBE1-202ENST00000368662 CCDC36Q8IYA8 594 aa10.81□□□□□ -0.68
TUBE1-202ENST00000368662 YIPF7Q8N8F6 280 aa10.81□□□□□ -0.68
TUBE1-202ENST00000368662 OR1K1Q8NGR3 316 aa10.81□□□□□ -0.68
TUBE1-202ENST00000368662 RND1Q92730 232 aa10.81□□□□□ -0.68
TUBE1-202ENST00000368662 SLAMF6Q96DU3 332 aa10.81□□□□□ -0.68
TUBE1-202ENST00000368662 TTTY10Q9BZA0 68 aa10.81□□□□□ -0.68
TUBE1-202ENST00000368662 MEMO1Q9Y316 297 aa10.81□□□□□ -0.68
TUBE1-202ENST00000368662 TIMM10BQ9Y5J6 103 aa10.81□□□□□ -0.68
TUBE1-202ENST00000368662 SMG1Q96Q15 3661 aaKnown RBP10.8□□□□□ -0.68
TUBE1-202ENST00000368662 COL6A6A6NMZ7 2263 aa10.8□□□□□ -0.68
TUBE1-202ENST00000368662 CCRL2O00421 344 aa10.8□□□□□ -0.68
TUBE1-202ENST00000368662 CD79BP40259 229 aa10.8□□□□□ -0.68
TUBE1-202ENST00000368662 RIDAP52758 137 aaKnown RBP10.8□□□□□ -0.68
TUBE1-202ENST00000368662 HIST1H3AP68431 136 aa10.8□□□□□ -0.68
TUBE1-202ENST00000368662 GPR50Q13585 617 aa10.8□□□□□ -0.68
TUBE1-202ENST00000368662 HIST2H3PS2Q5TEC6 136 aa10.8□□□□□ -0.68
TUBE1-202ENST00000368662 C9orf135Q5VTT2 229 aa10.8□□□□□ -0.68
TUBE1-202ENST00000368662 OR7E24Q6IFN5 339 aa10.8□□□□□ -0.68
TUBE1-202ENST00000368662 KLHL24Q6TFL4 600 aa10.8□□□□□ -0.68
TUBE1-202ENST00000368662 HIST2H3AQ71DI3 136 aa10.8□□□□□ -0.68
TUBE1-202ENST00000368662 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.8□□□□□ -0.68
TUBE1-202ENST00000368662 C1orf162Q8NEQ5 155 aaPredicted RBP10.8□□□□□ -0.68
TUBE1-202ENST00000368662 NANOS1Q8WY41 292 aaKnown RBP10.8□□□□□ -0.68
TUBE1-202ENST00000368662 HTRA1Q92743 480 aa10.8□□□□□ -0.68
TUBE1-202ENST00000368662 UFD1Q92890 307 aa10.8□□□□□ -0.68
TUBE1-202ENST00000368662 TMIGD2Q96BF3 282 aa10.8□□□□□ -0.68
TUBE1-202ENST00000368662 PELI1Q96FA3 418 aa10.8□□□□□ -0.68
TUBE1-202ENST00000368662 BOD1Q96IK1 185 aa10.8□□□□□ -0.68
TUBE1-202ENST00000368662 MAP6Q96JE9 813 aa10.8□□□□□ -0.68
TUBE1-202ENST00000368662 OPALINQ96PE5 141 aa10.8□□□□□ -0.68
TUBE1-202ENST00000368662 DMRTA2Q96SC8 542 aa10.8□□□□□ -0.68
TUBE1-202ENST00000368662 AMELYQ99218 206 aa10.8□□□□□ -0.68
TUBE1-202ENST00000368662 SH3GL3Q99963 347 aa10.8□□□□□ -0.68
TUBE1-202ENST00000368662 NIPAL2Q9H841 368 aa10.8□□□□□ -0.68
TUBE1-202ENST00000368662 ACOXLQ9NUZ1 547 aa10.8□□□□□ -0.68
TUBE1-202ENST00000368662 SLCO1C1Q9NYB5 712 aa10.8□□□□□ -0.68
TUBE1-202ENST00000368662 MRM2Q9UI43 246 aaKnown RBP10.8□□□□□ -0.68
TUBE1-202ENST00000368662 CACNA1CQ13936 2221 aa10.8□□□□□ -0.68
TUBE1-202ENST00000368662 A0A0G2JNJ9 132 aa10.79□□□□□ -0.68
TUBE1-202ENST00000368662 DPPA5A6NC42 116 aa10.79□□□□□ -0.68
TUBE1-202ENST00000368662 DVL2O14641 736 aa10.79□□□□□ -0.68
TUBE1-202ENST00000368662 MSTNO14793 375 aa10.79□□□□□ -0.68
TUBE1-202ENST00000368662 RER1O15258 196 aa10.79□□□□□ -0.68
TUBE1-202ENST00000368662 ABHD16AO95870 558 aa10.79□□□□□ -0.68
TUBE1-202ENST00000368662 H2BFMP0C1H6 154 aa10.79□□□□□ -0.68
TUBE1-202ENST00000368662 HOXB1P14653 301 aaPredicted RBP10.79□□□□□ -0.68
TUBE1-202ENST00000368662 CPEP16870 476 aa10.79□□□□□ -0.68
TUBE1-202ENST00000368662 COX5AP20674 150 aa10.79□□□□□ -0.68
TUBE1-202ENST00000368662 DCTDP32321 178 aa10.79□□□□□ -0.68
TUBE1-202ENST00000368662 OPRL1P41146 370 aa10.79□□□□□ -0.68
TUBE1-202ENST00000368662 TGM4P49221 684 aa10.79□□□□□ -0.68
TUBE1-202ENST00000368662 RGS6P49758 472 aa10.79□□□□□ -0.68
TUBE1-202ENST00000368662 TPBGQ13641 420 aa10.79□□□□□ -0.68
TUBE1-202ENST00000368662 LIPNQ5VXI9 398 aa10.79□□□□□ -0.68
TUBE1-202ENST00000368662 ZNF544Q6NX49 715 aa10.79□□□□□ -0.68
TUBE1-202ENST00000368662 RPL22L1Q6P5R6 122 aaKnown RBP10.79□□□□□ -0.68
TUBE1-202ENST00000368662 LRRN1Q6UXK5 716 aa10.79□□□□□ -0.68
TUBE1-202ENST00000368662 GABRG1Q8N1C3 465 aa10.79□□□□□ -0.68
TUBE1-202ENST00000368662 ZNF610Q8N9Z0 462 aa10.79□□□□□ -0.68
TUBE1-202ENST00000368662 FBXO17Q96EF6 278 aa10.79□□□□□ -0.68
TUBE1-202ENST00000368662 ELOVL3Q9HB03 270 aa10.79□□□□□ -0.68
TUBE1-202ENST00000368662 GALNT8Q9NY28 637 aa10.79□□□□□ -0.68
TUBE1-202ENST00000368662 Q9UFV3 132 aa10.79□□□□□ -0.68
TUBE1-202ENST00000368662 OSGIN2Q9Y236 505 aa10.79□□□□□ -0.68
TUBE1-202ENST00000368662 CIB4A0PJX0 185 aa10.79□□□□□ -0.68
TUBE1-202ENST00000368662 PRR32B1ATL7 298 aa10.79□□□□□ -0.68
TUBE1-202ENST00000368662 PSMD9O00233 223 aa10.79□□□□□ -0.68
TUBE1-202ENST00000368662 UBL3O95164 117 aa10.79□□□□□ -0.68
TUBE1-202ENST00000368662 IGHV1-2P23083 117 aa10.79□□□□□ -0.68
TUBE1-202ENST00000368662 FOXG1P55316 489 aaPredicted RBP10.79□□□□□ -0.68
TUBE1-202ENST00000368662 GRB2P62993 217 aaKnown RBP10.79□□□□□ -0.68
TUBE1-202ENST00000368662 ECH1Q13011 328 aa10.79□□□□□ -0.68
TUBE1-202ENST00000368662 TSTQ16762 297 aaKnown RBP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms