RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 VHLP40337 213 aa12.07□□□□□ -0.48
TPM3-211ENST00000368531 HCCSP53701 268 aa12.07□□□□□ -0.48
TPM3-211ENST00000368531 SNRPGP62308 76 aaKnown RBP12.07□□□□□ -0.48
TPM3-211ENST00000368531 NAAAQ02083 359 aa12.07□□□□□ -0.48
TPM3-211ENST00000368531 CCDC92Q53HC0 331 aaPredicted RBP12.07□□□□□ -0.48
TPM3-211ENST00000368531 C1QTNF12Q5T7M4 302 aa12.07□□□□□ -0.48
TPM3-211ENST00000368531 LCN1P1Q5VSP4 162 aa12.07□□□□□ -0.48
TPM3-211ENST00000368531 ZNF691Q5VV52 312 aa12.07□□□□□ -0.48
TPM3-211ENST00000368531 SLC18B1Q6NT16 456 aa12.07□□□□□ -0.48
TPM3-211ENST00000368531 SLC22A25Q6T423 547 aa12.07□□□□□ -0.48
TPM3-211ENST00000368531 CFAP77Q6ZQR2 320 aa12.07□□□□□ -0.48
TPM3-211ENST00000368531 SPATC1Q76KD6 591 aa12.07□□□□□ -0.48
TPM3-211ENST00000368531 SYT9Q86SS6 491 aa12.07□□□□□ -0.48
TPM3-211ENST00000368531 ZNF584Q8IVC4 421 aa12.07□□□□□ -0.48
TPM3-211ENST00000368531 GID4Q8IVV7 300 aa12.07□□□□□ -0.48
TPM3-211ENST00000368531 ALDH16A1Q8IZ83 802 aa12.07□□□□□ -0.48
TPM3-211ENST00000368531 CLN6Q9NWW5 311 aa12.07□□□□□ -0.48
TPM3-211ENST00000368531 GDF2Q9UK05 429 aaPredicted RBP12.07□□□□□ -0.48
TPM3-211ENST00000368531 PKDREJQ9NTG1 2253 aa12.06□□□□□ -0.48
TPM3-211ENST00000368531 SLC22A31A6NKX4 558 aa12.06□□□□□ -0.48
TPM3-211ENST00000368531 ATP6V1G2-DDX39BF2Z307 99 aa12.06□□□□□ -0.48
TPM3-211ENST00000368531 H0YAE9 185 aa12.06□□□□□ -0.48
TPM3-211ENST00000368531 TMCC2O75069 709 aa12.06□□□□□ -0.48
TPM3-211ENST00000368531 CTAG2O75638 210 aa12.06□□□□□ -0.48
TPM3-211ENST00000368531 CRYAAP02489 173 aa12.06□□□□□ -0.48
TPM3-211ENST00000368531 PAX7P23759 505 aa12.06□□□□□ -0.48
TPM3-211ENST00000368531 STOMP27105 288 aa12.06□□□□□ -0.48
TPM3-211ENST00000368531 CALCRP30988 508 aa12.06□□□□□ -0.48
TPM3-211ENST00000368531 APLNRP35414 380 aa12.06□□□□□ -0.48
TPM3-211ENST00000368531 HTR5AP47898 357 aa12.06□□□□□ -0.48
TPM3-211ENST00000368531 NUDT6P53370 316 aa12.06□□□□□ -0.48
TPM3-211ENST00000368531 NR1H2P55055 460 aa12.06□□□□□ -0.48
TPM3-211ENST00000368531 EIF2B1Q14232 305 aaKnown RBP12.06□□□□□ -0.48
TPM3-211ENST00000368531 SNCBQ16143 134 aa12.06□□□□□ -0.48
TPM3-211ENST00000368531 SHFQ7M4L6 423 aa12.06□□□□□ -0.48
TPM3-211ENST00000368531 DPY19L4Q7Z388 723 aa12.06□□□□□ -0.48
TPM3-211ENST00000368531 DCXRQ7Z4W1 244 aa12.06□□□□□ -0.48
TPM3-211ENST00000368531 TIGD4Q8IY51 512 aa12.06□□□□□ -0.48
TPM3-211ENST00000368531 FAM169BQ8N8A8 192 aa12.06□□□□□ -0.48
TPM3-211ENST00000368531 SLC30A7Q8NEW0 376 aa12.06□□□□□ -0.48
TPM3-211ENST00000368531 GJC3Q8NFK1 279 aa12.06□□□□□ -0.48
TPM3-211ENST00000368531 KBTBD8Q8NFY9 601 aa12.06□□□□□ -0.48
TPM3-211ENST00000368531 RHOXF1Q8NHV9 184 aa12.06□□□□□ -0.48
TPM3-211ENST00000368531 CNIH3Q8TBE1 160 aa12.06□□□□□ -0.48
TPM3-211ENST00000368531 THEM6Q8WUY1 208 aa12.06□□□□□ -0.48
TPM3-211ENST00000368531 SLC7A6Q92536 515 aa12.06□□□□□ -0.48
TPM3-211ENST00000368531 NEUROG1Q92886 237 aa12.06□□□□□ -0.48
TPM3-211ENST00000368531 MAP6Q96JE9 813 aa12.06□□□□□ -0.48
TPM3-211ENST00000368531 OR51B6Q9H340 312 aa12.06□□□□□ -0.48
TPM3-211ENST00000368531 OCEL1Q9H607 264 aa12.06□□□□□ -0.48
TPM3-211ENST00000368531 CDH20Q9HBT6 801 aa12.06□□□□□ -0.48
TPM3-211ENST00000368531 MOV10Q9HCE1 1003 aaKnown RBP12.06□□□□□ -0.48
TPM3-211ENST00000368531 CENPMQ9NSP4 180 aa12.06□□□□□ -0.48
TPM3-211ENST00000368531 CYB5R1Q9UHQ9 305 aa12.06□□□□□ -0.48
TPM3-211ENST00000368531 KCNG2Q9UJ96 466 aa12.06□□□□□ -0.48
TPM3-211ENST00000368531 POU2F3Q9UKI9 436 aa12.06□□□□□ -0.48
TPM3-211ENST00000368531 RNF115Q9Y4L5 304 aa12.06□□□□□ -0.48
TPM3-211ENST00000368531 ATP23Q9Y6H3 246 aa12.06□□□□□ -0.48
TPM3-211ENST00000368531 H0YJX3 145 aa12.05□□□□□ -0.48
TPM3-211ENST00000368531 MPZL2O60487 215 aa12.05□□□□□ -0.48
TPM3-211ENST00000368531 PTHP01270 115 aa12.05□□□□□ -0.48
TPM3-211ENST00000368531 GABRB1P18505 474 aa12.05□□□□□ -0.48
TPM3-211ENST00000368531 HTR1FP30939 366 aa12.05□□□□□ -0.48
TPM3-211ENST00000368531 ATP6V1E1P36543 226 aa12.05□□□□□ -0.48
TPM3-211ENST00000368531 GDI2P50395 445 aaKnown RBP12.05□□□□□ -0.48
TPM3-211ENST00000368531 MAD2L1BPQ15013 274 aaPredicted RBP12.05□□□□□ -0.48
TPM3-211ENST00000368531 OCLNQ16625 522 aa12.05□□□□□ -0.48
TPM3-211ENST00000368531 TBC1D28Q2M2D7 210 aa12.05□□□□□ -0.48
TPM3-211ENST00000368531 C3orf36Q3SXR2 165 aa12.05□□□□□ -0.48
TPM3-211ENST00000368531 ELFN2Q5R3F8 820 aa12.05□□□□□ -0.48
TPM3-211ENST00000368531 MEDAGQ5VYS4 303 aa12.05□□□□□ -0.48
TPM3-211ENST00000368531 ZNF704Q6ZNC4 412 aaPredicted RBP12.05□□□□□ -0.48
TPM3-211ENST00000368531 VASH1Q7L8A9 365 aaPredicted RBP12.05□□□□□ -0.48
TPM3-211ENST00000368531 SLC16A9Q7RTY1 509 aa12.05□□□□□ -0.48
TPM3-211ENST00000368531 C8orf59Q8N0T1 100 aaPredicted RBP12.05□□□□□ -0.48
TPM3-211ENST00000368531 PAQR4Q8N4S7 273 aaPredicted RBP12.05□□□□□ -0.48
TPM3-211ENST00000368531 SETD9Q8NE22 299 aa12.05□□□□□ -0.48
TPM3-211ENST00000368531 OR51G2Q8NGK0 314 aa12.05□□□□□ -0.48
TPM3-211ENST00000368531 OR1F12Q8NHA8 337 aa12.05□□□□□ -0.48
TPM3-211ENST00000368531 TFAP2CQ92754 450 aa12.05□□□□□ -0.48
TPM3-211ENST00000368531 RFKQ969G6 155 aa12.05□□□□□ -0.48
TPM3-211ENST00000368531 CNN2Q99439 309 aaKnown RBP12.05□□□□□ -0.48
TPM3-211ENST00000368531 WACQ9BTA9 647 aa12.05□□□□□ -0.48
TPM3-211ENST00000368531 TTTY10Q9BZA0 68 aa12.05□□□□□ -0.48
TPM3-211ENST00000368531 CLEC4MQ9H2X3 399 aaPredicted RBP12.05□□□□□ -0.48
TPM3-211ENST00000368531 C1orf198Q9H425 327 aa12.05□□□□□ -0.48
TPM3-211ENST00000368531 MARCH7Q9H992 704 aa12.05□□□□□ -0.48
TPM3-211ENST00000368531 AMBNQ9NP70 447 aa12.05□□□□□ -0.48
TPM3-211ENST00000368531 WARS2Q9UGM6 360 aaKnown RBP12.05□□□□□ -0.48
TPM3-211ENST00000368531 FBXL3Q9UKT7 428 aa12.05□□□□□ -0.48
TPM3-211ENST00000368531 LOC100509620A0A075B734 347 aa12.04□□□□□ -0.48
TPM3-211ENST00000368531 IGHV2OR16-5A0A0B4J2B6 119 aa12.04□□□□□ -0.48
TPM3-211ENST00000368531 A0A1W2PPR1 153 aa12.04□□□□□ -0.48
TPM3-211ENST00000368531 C5orf49A4QMS7 147 aa12.04□□□□□ -0.48
TPM3-211ENST00000368531 SYNGR3O43761 229 aa12.04□□□□□ -0.48
TPM3-211ENST00000368531 DBHP09172 617 aa12.04□□□□□ -0.48
TPM3-211ENST00000368531 PRF1P14222 555 aa12.04□□□□□ -0.48
TPM3-211ENST00000368531 SSTR2P30874 369 aa12.04□□□□□ -0.48
TPM3-211ENST00000368531 HIST1H3AP68431 136 aa12.04□□□□□ -0.48
TPM3-211ENST00000368531 IL18R1Q13478 541 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms