RNA–Protein interactions for RNA: ENST00000368311.5

SSR2-202, Transcript of signal sequence receptor subunit 2, humanhuman

TSL 1 (best)

Gene SSR2, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2-202ENST00000368311 SPSB1Q96BD6 273 aa7.44□□□□□ -1.22
SSR2-202ENST00000368311 EGLN2Q96KS0 407 aa7.44□□□□□ -1.22
SSR2-202ENST00000368311 RNF7Q9UBF6 113 aa7.44□□□□□ -1.22
SSR2-202ENST00000368311 MRPS18BQ9Y676 258 aaKnown RBP7.44□□□□□ -1.22
SSR2-202ENST00000368311 SLC35F4A4IF30 521 aa7.43□□□□□ -1.22
SSR2-202ENST00000368311 CRTAPO75718 401 aaPredicted RBP7.43□□□□□ -1.22
SSR2-202ENST00000368311 SOX14O95416 240 aa7.43□□□□□ -1.22
SSR2-202ENST00000368311 TFP02787 698 aa7.43□□□□□ -1.22
SSR2-202ENST00000368311 FOXA1P55317 472 aa7.43□□□□□ -1.22
SSR2-202ENST00000368311 PIN1Q13526 163 aaPredicted RBP7.43□□□□□ -1.22
SSR2-202ENST00000368311 FAM131AQ6UXB0 335 aa7.43□□□□□ -1.22
SSR2-202ENST00000368311 CCDC103Q8IW40 242 aa7.43□□□□□ -1.22
SSR2-202ENST00000368311 OR5H2Q8NGV7 314 aa7.43□□□□□ -1.22
SSR2-202ENST00000368311 OR4K15Q8NH41 348 aa7.43□□□□□ -1.22
SSR2-202ENST00000368311 DCUN1D4Q92564 292 aa7.43□□□□□ -1.22
SSR2-202ENST00000368311 VSTM2LQ96N03 204 aa7.43□□□□□ -1.22
SSR2-202ENST00000368311 ZNF285Q96NJ3 590 aa7.43□□□□□ -1.22
SSR2-202ENST00000368311 SPSB2Q99619 263 aa7.43□□□□□ -1.22
SSR2-202ENST00000368311 ARPC5LQ9BPX5 153 aa7.43□□□□□ -1.22
SSR2-202ENST00000368311 LINC00470Q9BZP3 86 aa7.43□□□□□ -1.22
SSR2-202ENST00000368311 PAIP1Q9H074 479 aaKnown RBP7.43□□□□□ -1.22
SSR2-202ENST00000368311 DDX28Q9NUL7 540 aaKnown RBP7.43□□□□□ -1.22
SSR2-202ENST00000368311 ZNF701Q9NV72 531 aaPredicted RBP7.43□□□□□ -1.22
SSR2-202ENST00000368311 ZNF281Q9Y2X9 895 aa7.43□□□□□ -1.22
SSR2-202ENST00000368311 SF3B6Q9Y3B4 125 aaKnown RBP7.43□□□□□ -1.22
SSR2-202ENST00000368311 ANK1P16157 1881 aa7.43□□□□□ -1.22
SSR2-202ENST00000368311 LINC00854A0A1B0GVQ3 168 aa7.43□□□□□ -1.22
SSR2-202ENST00000368311 TRIM77I1YAP6 450 aa7.43□□□□□ -1.22
SSR2-202ENST00000368311 NDUFS8O00217 210 aa7.43□□□□□ -1.22
SSR2-202ENST00000368311 FRS3O43559 492 aa7.43□□□□□ -1.22
SSR2-202ENST00000368311 ONECUT2O95948 504 aa7.43□□□□□ -1.22
SSR2-202ENST00000368311 CPN1P15169 458 aa7.43□□□□□ -1.22
SSR2-202ENST00000368311 SPINK2P20155 84 aa7.43□□□□□ -1.22
SSR2-202ENST00000368311 GNRHRP30968 328 aa7.43□□□□□ -1.22
SSR2-202ENST00000368311 AP2S1P53680 142 aaPredicted RBP7.43□□□□□ -1.22
SSR2-202ENST00000368311 LIPKQ5VXJ0 399 aa7.43□□□□□ -1.22
SSR2-202ENST00000368311 ASRGL1Q7L266 308 aa7.43□□□□□ -1.22
SSR2-202ENST00000368311 RAB2BQ8WUD1 216 aa7.43□□□□□ -1.22
SSR2-202ENST00000368311 CANT1Q8WVQ1 401 aa7.43□□□□□ -1.22
SSR2-202ENST00000368311 FCAMRQ8WWV6 532 aa7.43□□□□□ -1.22
SSR2-202ENST00000368311 CNRIP1Q96F85 164 aaPredicted RBP7.43□□□□□ -1.22
SSR2-202ENST00000368311 OR14J1Q9UGF5 321 aa7.43□□□□□ -1.22
SSR2-202ENST00000368311 NPTNQ9Y639 398 aa7.43□□□□□ -1.22
SSR2-202ENST00000368311 LRRN3E7EW58 273 aa7.43□□□□□ -1.22
SSR2-202ENST00000368311 B3GALNT1O75752 331 aa7.43□□□□□ -1.22
SSR2-202ENST00000368311 RAF1P04049 648 aa7.43□□□□□ -1.22
SSR2-202ENST00000368311 ZNF16P17020 682 aaPredicted RBP7.43□□□□□ -1.22
SSR2-202ENST00000368311 ERVFRD-1P60508 538 aa7.43□□□□□ -1.22
SSR2-202ENST00000368311 ZP4Q12836 540 aa7.43□□□□□ -1.22
SSR2-202ENST00000368311 YIF1BQ5BJH7 314 aa7.43□□□□□ -1.22
SSR2-202ENST00000368311 KHDC1LQ5JSQ8 128 aa7.43□□□□□ -1.22
SSR2-202ENST00000368311 C1QL3Q5VWW1 255 aa7.43□□□□□ -1.22
SSR2-202ENST00000368311 GALNT10Q86SR1 603 aa7.43□□□□□ -1.22
SSR2-202ENST00000368311 TNFAIP8L1Q8WVP5 186 aa7.43□□□□□ -1.22
SSR2-202ENST00000368311 ADAT1Q9BUB4 502 aaKnown RBP7.43□□□□□ -1.22
SSR2-202ENST00000368311 OCEL1Q9H607 264 aa7.43□□□□□ -1.22
SSR2-202ENST00000368311 CD248Q9HCU0 757 aa7.43□□□□□ -1.22
SSR2-202ENST00000368311 GMPR2Q9P2T1 348 aaKnown RBP7.43□□□□□ -1.22
SSR2-202ENST00000368311 TP73O15350 636 aa7.43□□□□□ -1.22
SSR2-202ENST00000368311 GPR37O15354 613 aa7.43□□□□□ -1.22
SSR2-202ENST00000368311 BCAS1O75363 584 aaPredicted RBP7.43□□□□□ -1.22
SSR2-202ENST00000368311 CHRM2P08172 466 aa7.43□□□□□ -1.22
SSR2-202ENST00000368311 CCL3P10147 92 aa7.43□□□□□ -1.22
SSR2-202ENST00000368311 TACR1P25103 407 aa7.43□□□□□ -1.22
SSR2-202ENST00000368311 CA7P43166 264 aa7.43□□□□□ -1.22
SSR2-202ENST00000368311 CD97P48960 835 aa7.43□□□□□ -1.22
SSR2-202ENST00000368311 TAGLNQ01995 201 aaKnown RBP7.43□□□□□ -1.22
SSR2-202ENST00000368311 ACKR1Q16570 336 aa7.43□□□□□ -1.22
SSR2-202ENST00000368311 EIF5AL1Q6IS14 154 aaKnown RBP7.43□□□□□ -1.22
SSR2-202ENST00000368311 Q6ZSR9 355 aa7.43□□□□□ -1.22
SSR2-202ENST00000368311 KANSL1Q7Z3B3 1105 aa7.43□□□□□ -1.22
SSR2-202ENST00000368311 SIGLEC12Q96PQ1 595 aa7.43□□□□□ -1.22
SSR2-202ENST00000368311 PKP2Q99959 881 aa7.43□□□□□ -1.22
SSR2-202ENST00000368311 HES4Q9HCC6 221 aa7.43□□□□□ -1.22
SSR2-202ENST00000368311 GAR1Q9NY12 217 aaKnown RBP7.43□□□□□ -1.22
SSR2-202ENST00000368311 EMCNQ9ULC0 261 aa7.43□□□□□ -1.22
SSR2-202ENST00000368311 PRELID1Q9Y255 219 aa7.43□□□□□ -1.22
SSR2-202ENST00000368311 A0A1W2PNR3 127 aa7.42□□□□□ -1.22
SSR2-202ENST00000368311 CDRT15L2A8MXV6 281 aa7.42□□□□□ -1.22
SSR2-202ENST00000368311 PYCR1P32322 319 aa7.42□□□□□ -1.22
SSR2-202ENST00000368311 RFC3P40938 356 aa7.42□□□□□ -1.22
SSR2-202ENST00000368311 NPY4RP50391 375 aa7.42□□□□□ -1.22
SSR2-202ENST00000368311 TMEM267Q0VDI3 215 aaPredicted RBP7.42□□□□□ -1.22
SSR2-202ENST00000368311 GNMTQ14749 295 aa7.42□□□□□ -1.22
SSR2-202ENST00000368311 ZBTB37Q5TC79 503 aa7.42□□□□□ -1.22
SSR2-202ENST00000368311 LRRC20Q8TCA0 184 aa7.42□□□□□ -1.22
SSR2-202ENST00000368311 CMSS1Q9BQ75 279 aaKnown RBP7.42□□□□□ -1.22
SSR2-202ENST00000368311 SUCNR1Q9BXA5 334 aa7.42□□□□□ -1.22
SSR2-202ENST00000368311 CISD1Q9NZ45 108 aaKnown RBP7.42□□□□□ -1.22
SSR2-202ENST00000368311 OR6C3Q9NZP0 311 aa7.42□□□□□ -1.22
SSR2-202ENST00000368311 DNAJC27Q9NZQ0 273 aa7.42□□□□□ -1.22
SSR2-202ENST00000368311 SLC23A1Q9UHI7 598 aa7.42□□□□□ -1.22
SSR2-202ENST00000368311 OR52A1Q9UKL2 312 aa7.42□□□□□ -1.22
SSR2-202ENST00000368311 TRIP11Q15643 1979 aa7.42□□□□□ -1.22
SSR2-202ENST00000368311 CLVS1Q8IUQ0 354 aaPredicted RBP7.42□□□□□ -1.22
SSR2-202ENST00000368311 CPOQ8IVL8 374 aa7.42□□□□□ -1.22
SSR2-202ENST00000368311 LRRC17Q8N6Y2 441 aa7.42□□□□□ -1.22
SSR2-202ENST00000368311 CYB561A3Q8NBI2 242 aa7.42□□□□□ -1.22
SSR2-202ENST00000368311 DHRS9Q9BPW9 319 aa7.42□□□□□ -1.22
SSR2-202ENST00000368311 ATG5Q9H1Y0 275 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms