RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 ETFDHQ16134 617 aa12.81□□□□□ -0.36
CD48-201ENST00000368045 C2orf68Q2NKX9 166 aa12.81□□□□□ -0.36
CD48-201ENST00000368045 WDR45BQ5MNZ6 344 aa12.81□□□□□ -0.36
CD48-201ENST00000368045 PHF19Q5T6S3 580 aa12.81□□□□□ -0.36
CD48-201ENST00000368045 RGS7BPQ6MZT1 257 aaPredicted RBP12.81□□□□□ -0.36
CD48-201ENST00000368045 LPCAT3Q6P1A2 487 aa12.81□□□□□ -0.36
CD48-201ENST00000368045 H1FNTQ75WM6 255 aaPredicted RBP12.81□□□□□ -0.36
CD48-201ENST00000368045 PRSS42Q7Z5A4 293 aa12.81□□□□□ -0.36
CD48-201ENST00000368045 C12orf45Q8N5I9 185 aaPredicted RBP12.81□□□□□ -0.36
CD48-201ENST00000368045 DUSP19Q8WTR2 217 aa12.81□□□□□ -0.36
CD48-201ENST00000368045 DPYSL5Q9BPU6 564 aa12.81□□□□□ -0.36
CD48-201ENST00000368045 EDEM2Q9BV94 578 aa12.81□□□□□ -0.36
CD48-201ENST00000368045 REG4Q9BYZ8 158 aa12.81□□□□□ -0.36
CD48-201ENST00000368045 OR11A1Q9GZK7 315 aa12.81□□□□□ -0.36
CD48-201ENST00000368045 ARL6Q9H0F7 186 aa12.81□□□□□ -0.36
CD48-201ENST00000368045 FXYD6Q9H0Q3 95 aa12.81□□□□□ -0.36
CD48-201ENST00000368045 KCNK15Q9H427 330 aa12.81□□□□□ -0.36
CD48-201ENST00000368045 POFUT1Q9H488 388 aa12.81□□□□□ -0.36
CD48-201ENST00000368045 NPIPA1Q9UND3 350 aa12.81□□□□□ -0.36
CD48-201ENST00000368045 EMC9Q9Y3B6 208 aa12.81□□□□□ -0.36
CD48-201ENST00000368045 MPDZO75970 2070 aa12.8□□□□□ -0.36
CD48-201ENST00000368045 RFPL4AA6NLU0 287 aa12.8□□□□□ -0.36
CD48-201ENST00000368045 RFPL4AL1F8VTS6 287 aa12.8□□□□□ -0.36
CD48-201ENST00000368045 RAD1O60671 282 aa12.8□□□□□ -0.36
CD48-201ENST00000368045 WISP1O95388 367 aa12.8□□□□□ -0.36
CD48-201ENST00000368045 SIX6O95475 246 aa12.8□□□□□ -0.36
CD48-201ENST00000368045 NMBP08949 121 aa12.8□□□□□ -0.36
CD48-201ENST00000368045 OR4E1P0C645 316 aa12.8□□□□□ -0.36
CD48-201ENST00000368045 NAGAP17050 411 aa12.8□□□□□ -0.36
CD48-201ENST00000368045 MPZP25189 248 aa12.8□□□□□ -0.36
CD48-201ENST00000368045 AGTR1P30556 359 aa12.8□□□□□ -0.36
CD48-201ENST00000368045 FGL1Q08830 312 aa12.8□□□□□ -0.36
CD48-201ENST00000368045 PMPCAQ10713 525 aa12.8□□□□□ -0.36
CD48-201ENST00000368045 UBXN2BQ14CS0 331 aa12.8□□□□□ -0.36
CD48-201ENST00000368045 ZMYND11Q15326 602 aa12.8□□□□□ -0.36
CD48-201ENST00000368045 C11orf88Q6PI97 169 aa12.8□□□□□ -0.36
CD48-201ENST00000368045 GSG1LQ6UXU4 331 aa12.8□□□□□ -0.36
CD48-201ENST00000368045 ZNF627Q7L945 461 aa12.8□□□□□ -0.36
CD48-201ENST00000368045 SLC51BQ86UW2 128 aa12.8□□□□□ -0.36
CD48-201ENST00000368045 LYPD6Q86Y78 171 aa12.8□□□□□ -0.36
CD48-201ENST00000368045 OR8S1Q8NH09 359 aa12.8□□□□□ -0.36
CD48-201ENST00000368045 ST7LQ8TDW4 575 aa12.8□□□□□ -0.36
CD48-201ENST00000368045 PCNPQ8WW12 178 aaKnown RBP12.8□□□□□ -0.36
CD48-201ENST00000368045 PPP1R14AQ96A00 147 aa12.8□□□□□ -0.36
CD48-201ENST00000368045 DNAJA3Q96EY1 480 aa12.8□□□□□ -0.36
CD48-201ENST00000368045 WDR89Q96FK6 387 aaPredicted RBP12.8□□□□□ -0.36
CD48-201ENST00000368045 KCNK17Q96T54 332 aa12.8□□□□□ -0.36
CD48-201ENST00000368045 TGIF2Q9GZN2 237 aa12.8□□□□□ -0.36
CD48-201ENST00000368045 SDHAF2Q9NX18 166 aa12.8□□□□□ -0.36
CD48-201ENST00000368045 SLC2A8Q9NY64 477 aa12.8□□□□□ -0.36
CD48-201ENST00000368045 PISDQ9UG56 409 aa12.8□□□□□ -0.36
CD48-201ENST00000368045 PFDN2Q9UHV9 154 aa12.8□□□□□ -0.36
CD48-201ENST00000368045 RAB22AQ9UL26 194 aa12.8□□□□□ -0.36
CD48-201ENST00000368045 MRPS18BQ9Y676 258 aaKnown RBP12.8□□□□□ -0.36
CD48-201ENST00000368045 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.79□□□□□ -0.36
CD48-201ENST00000368045 LOC105371267A0A1B0GV96 52 aa12.79□□□□□ -0.36
CD48-201ENST00000368045 METTL21EPA6NDL7 271 aa12.79□□□□□ -0.36
CD48-201ENST00000368045 MEIS3P1A6NDR6 274 aa12.79□□□□□ -0.36
CD48-201ENST00000368045 ZNF736B4DX44 427 aaPredicted RBP12.79□□□□□ -0.36
CD48-201ENST00000368045 MS4A18H0YCH9 400 aa12.79□□□□□ -0.36
CD48-201ENST00000368045 ZNF208O43345 1280 aa12.79□□□□□ -0.36
CD48-201ENST00000368045 PIAS2O75928 621 aa12.79□□□□□ -0.36
CD48-201ENST00000368045 SCGNO76038 276 aa12.79□□□□□ -0.36
CD48-201ENST00000368045 FOLR1P15328 257 aa12.79□□□□□ -0.36
CD48-201ENST00000368045 MMP16P51512 607 aa12.79□□□□□ -0.36
CD48-201ENST00000368045 SRSF4Q08170 494 aaKnown RBP12.79□□□□□ -0.36
CD48-201ENST00000368045 C17orf67Q0P5P2 114 aa12.79□□□□□ -0.36
CD48-201ENST00000368045 MS4A18Q3C1V0 323 aa12.79□□□□□ -0.36
CD48-201ENST00000368045 DCAF12L2Q5VW00 463 aa12.79□□□□□ -0.36
CD48-201ENST00000368045 DCXRQ7Z4W1 244 aa12.79□□□□□ -0.36
CD48-201ENST00000368045 OR6K3Q8NGY3 331 aa12.79□□□□□ -0.36
CD48-201ENST00000368045 RNF133Q8WVZ7 376 aa12.79□□□□□ -0.36
CD48-201ENST00000368045 DVL3Q92997 716 aaPredicted RBP12.79□□□□□ -0.36
CD48-201ENST00000368045 CMKLR1Q99788 373 aa12.79□□□□□ -0.36
CD48-201ENST00000368045 LMAN1LQ9HAT1 526 aa12.79□□□□□ -0.36
CD48-201ENST00000368045 CHST11Q9NPF2 352 aa12.79□□□□□ -0.36
CD48-201ENST00000368045 SPTBP11277 2137 aa12.79□□□□□ -0.36
CD48-201ENST00000368045 TMEM269A0A1B0GVZ9 245 aa12.79□□□□□ -0.36
CD48-201ENST00000368045 TMEM200CA6NKL6 621 aa12.79□□□□□ -0.36
CD48-201ENST00000368045 DISC1C4P0D8 188 aa12.79□□□□□ -0.36
CD48-201ENST00000368045 KRBOX1C9JBD0 128 aa12.79□□□□□ -0.36
CD48-201ENST00000368045 AMY2AP04746 511 aa12.79□□□□□ -0.36
CD48-201ENST00000368045 SRFP11831 508 aa12.79□□□□□ -0.36
CD48-201ENST00000368045 HSD11B1P28845 292 aa12.79□□□□□ -0.36
CD48-201ENST00000368045 RNF4P78317 190 aa12.79□□□□□ -0.36
CD48-201ENST00000368045 PRAMEF17Q5VTA0 474 aa12.79□□□□□ -0.36
CD48-201ENST00000368045 OTPQ5XKR4 325 aa12.79□□□□□ -0.36
CD48-201ENST00000368045 MDGA2Q7Z553 956 aa12.79□□□□□ -0.36
CD48-201ENST00000368045 PRSS58Q8IYP2 241 aa12.79□□□□□ -0.36
CD48-201ENST00000368045 JAGN1Q8N5M9 183 aa12.79□□□□□ -0.36
CD48-201ENST00000368045 DEFB119Q8N690 84 aa12.79□□□□□ -0.36
CD48-201ENST00000368045 DDIT4LQ96D03 193 aa12.79□□□□□ -0.36
CD48-201ENST00000368045 CCDC120Q96HB5 630 aa12.79□□□□□ -0.36
CD48-201ENST00000368045 PPA2Q9H2U2 334 aa12.79□□□□□ -0.36
CD48-201ENST00000368045 FANCFQ9NPI8 374 aa12.79□□□□□ -0.36
CD48-201ENST00000368045 CGGBP1Q9UFW8 167 aaPredicted RBP12.79□□□□□ -0.36
CD48-201ENST00000368045 SRPK3Q9UPE1 567 aa12.79□□□□□ -0.36
CD48-201ENST00000368045 A0A1B0GW55 424 aa12.78□□□□□ -0.36
CD48-201ENST00000368045 ETV2O00321 342 aaPredicted RBP12.78□□□□□ -0.36
CD48-201ENST00000368045 MPZL1O95297 269 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms