RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 MRPL52Q86TS9 123 aaKnown RBP7.93□□□□□ -1.14
SYNE1-206ENST00000367253 TMIGD2Q96BF3 282 aa7.93□□□□□ -1.14
SYNE1-206ENST00000367253 RBMXL1Q96E39 390 aaKnown RBP7.93□□□□□ -1.14
SYNE1-206ENST00000367253 C20orf24Q9BUV8 137 aa7.93□□□□□ -1.14
SYNE1-206ENST00000367253 OR2J1Q9GZK6 312 aa7.93□□□□□ -1.14
SYNE1-206ENST00000367253 CWH43Q9H720 699 aa7.93□□□□□ -1.14
SYNE1-206ENST00000367253 SYNPO2LQ9H987 977 aa7.93□□□□□ -1.14
SYNE1-206ENST00000367253 KCNK7Q9Y2U2 307 aa7.93□□□□□ -1.14
SYNE1-206ENST00000367253 ELOA3CA0A087WX78 387 aaPredicted RBP7.93□□□□□ -1.14
SYNE1-206ENST00000367253 NUDT21O43809 227 aaKnown RBP7.93□□□□□ -1.14
SYNE1-206ENST00000367253 HLA-DQB2P05538 268 aa7.93□□□□□ -1.14
SYNE1-206ENST00000367253 SERPINE2P07093 398 aa7.93□□□□□ -1.14
SYNE1-206ENST00000367253 MYF5P13349 255 aa7.93□□□□□ -1.14
SYNE1-206ENST00000367253 BMP5P22003 454 aa7.93□□□□□ -1.14
SYNE1-206ENST00000367253 OR1E2P47887 323 aa7.93□□□□□ -1.14
SYNE1-206ENST00000367253 ZFP36L2P47974 494 aaKnown RBP7.93□□□□□ -1.14
SYNE1-206ENST00000367253 SUB1P53999 127 aaKnown RBP eCLIP7.93□□□□□ -1.14
SYNE1-206ENST00000367253 AANATQ16613 207 aa7.93□□□□□ -1.14
SYNE1-206ENST00000367253 SLC18B1Q6NT16 456 aa7.93□□□□□ -1.14
SYNE1-206ENST00000367253 OR51A7Q8NH64 312 aa7.93□□□□□ -1.14
SYNE1-206ENST00000367253 OR52A5Q9H2C5 316 aa7.93□□□□□ -1.14
SYNE1-206ENST00000367253 MAGIXQ9H6Y5 334 aa7.93□□□□□ -1.14
SYNE1-206ENST00000367253 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.93□□□□□ -1.14
SYNE1-206ENST00000367253 FOXJ2Q9P0K8 574 aa7.93□□□□□ -1.14
SYNE1-206ENST00000367253 SNX11Q9Y5W9 270 aa7.93□□□□□ -1.14
SYNE1-206ENST00000367253 TGIF2-C20orf24A0A0A6YYL0 155 aa7.92□□□□□ -1.14
SYNE1-206ENST00000367253 ZCWPW2A0A1B0GU75 182 aa7.92□□□□□ -1.14
SYNE1-206ENST00000367253 SPINT2O43291 252 aa7.92□□□□□ -1.14
SYNE1-206ENST00000367253 DAOP14920 347 aa7.92□□□□□ -1.14
SYNE1-206ENST00000367253 TBPP20226 339 aa7.92□□□□□ -1.14
SYNE1-206ENST00000367253 BCL7AQ4VC05 210 aa7.92□□□□□ -1.14
SYNE1-206ENST00000367253 RBMXL3Q8N7X1 1067 aaKnown RBP7.92□□□□□ -1.14
SYNE1-206ENST00000367253 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.92□□□□□ -1.14
SYNE1-206ENST00000367253 PXT1Q8NFP0 134 aa7.92□□□□□ -1.14
SYNE1-206ENST00000367253 OR4F6Q8NGB9 312 aa7.92□□□□□ -1.14
SYNE1-206ENST00000367253 OR52E1Q8NGJ3 308 aa7.92□□□□□ -1.14
SYNE1-206ENST00000367253 OR5D16Q8NGK9 328 aa7.92□□□□□ -1.14
SYNE1-206ENST00000367253 OR13C4Q8NGS5 318 aa7.92□□□□□ -1.14
SYNE1-206ENST00000367253 RNF141Q8WVD5 230 aa7.92□□□□□ -1.14
SYNE1-206ENST00000367253 BCL2L2Q92843 193 aaPredicted RBP7.92□□□□□ -1.14
SYNE1-206ENST00000367253 DPH3Q96FX2 82 aa7.92□□□□□ -1.14
SYNE1-206ENST00000367253 SLC46A1Q96NT5 459 aa7.92□□□□□ -1.14
SYNE1-206ENST00000367253 GPR22Q99680 433 aa7.92□□□□□ -1.14
SYNE1-206ENST00000367253 KCNJ15Q99712 375 aa7.92□□□□□ -1.14
SYNE1-206ENST00000367253 ARHGDIGQ99819 225 aa7.92□□□□□ -1.14
SYNE1-206ENST00000367253 GLRX2Q9NS18 164 aa7.92□□□□□ -1.14
SYNE1-206ENST00000367253 ZNF629Q9UEG4 869 aaPredicted RBP7.92□□□□□ -1.14
SYNE1-206ENST00000367253 LOC285095A0A1B0GVY8 99 aa7.92□□□□□ -1.14
SYNE1-206ENST00000367253 RFPL4AA6NLU0 287 aa7.92□□□□□ -1.14
SYNE1-206ENST00000367253 A8MVM7 634 aa7.92□□□□□ -1.14
SYNE1-206ENST00000367253 RFPL4AL1F8VTS6 287 aa7.92□□□□□ -1.14
SYNE1-206ENST00000367253 GABARAPH6UMI1 98 aa7.92□□□□□ -1.14
SYNE1-206ENST00000367253 GAPDHSO14556 408 aaPredicted RBP7.92□□□□□ -1.14
SYNE1-206ENST00000367253 NDUFB3O43676 98 aa7.92□□□□□ -1.14
SYNE1-206ENST00000367253 GABARAPO95166 117 aa7.92□□□□□ -1.14
SYNE1-206ENST00000367253 OR13C7P0DN81 318 aa7.92□□□□□ -1.14
SYNE1-206ENST00000367253 ETV4P43268 484 aa7.92□□□□□ -1.14
SYNE1-206ENST00000367253 PCBP2Q15366 365 aaKnown RBP eCLIP7.92□□□□□ -1.14
SYNE1-206ENST00000367253 Q6ZTK2 550 aa7.92□□□□□ -1.14
SYNE1-206ENST00000367253 ACOT7LQ6ZUV0 252 aa7.92□□□□□ -1.14
SYNE1-206ENST00000367253 PARS2Q7L3T8 475 aaKnown RBP7.92□□□□□ -1.14
SYNE1-206ENST00000367253 GOLGA7Q7Z5G4 137 aa7.92□□□□□ -1.14
SYNE1-206ENST00000367253 TEX26Q8N6G2 289 aa7.92□□□□□ -1.14
SYNE1-206ENST00000367253 OR13C6PQ8NH95 151 aa7.92□□□□□ -1.14
SYNE1-206ENST00000367253 DYNLRB2Q8TF09 96 aa7.92□□□□□ -1.14
SYNE1-206ENST00000367253 SLC38A5Q8WUX1 472 aa7.92□□□□□ -1.14
SYNE1-206ENST00000367253 LRRC3BQ96PB8 259 aa7.92□□□□□ -1.14
SYNE1-206ENST00000367253 UHRF2Q96PU4 802 aa7.92□□□□□ -1.14
SYNE1-206ENST00000367253 CNN2Q99439 309 aaKnown RBP7.92□□□□□ -1.14
SYNE1-206ENST00000367253 ATG101Q9BSB4 218 aa7.92□□□□□ -1.14
SYNE1-206ENST00000367253 NOX3Q9HBY0 568 aa7.92□□□□□ -1.14
SYNE1-206ENST00000367253 RAB18Q9NP72 206 aa7.92□□□□□ -1.14
SYNE1-206ENST00000367253 LOC105371267A0A1B0GV96 52 aa7.92□□□□□ -1.14
SYNE1-206ENST00000367253 UNC119BA6NIH7 251 aa7.92□□□□□ -1.14
SYNE1-206ENST00000367253 CD300LBA8K4G0 201 aa7.92□□□□□ -1.14
SYNE1-206ENST00000367253 SOCS2O14508 198 aa7.92□□□□□ -1.14
SYNE1-206ENST00000367253 MT-ND4P03905 459 aa7.92□□□□□ -1.14
SYNE1-206ENST00000367253 CAPNS1P04632 268 aa7.92□□□□□ -1.14
SYNE1-206ENST00000367253 NFYAP23511 347 aaPredicted RBP7.92□□□□□ -1.14
SYNE1-206ENST00000367253 F2RP25116 425 aa7.92□□□□□ -1.14
SYNE1-206ENST00000367253 IVDP26440 423 aa7.92□□□□□ -1.14
SYNE1-206ENST00000367253 CCKARP32238 428 aa7.92□□□□□ -1.14
SYNE1-206ENST00000367253 KDELR2P33947 212 aa7.92□□□□□ -1.14
SYNE1-206ENST00000367253 ASAH1Q13510 395 aa7.92□□□□□ -1.14
SYNE1-206ENST00000367253 RPE65Q16518 533 aa7.92□□□□□ -1.14
SYNE1-206ENST00000367253 LRFN4Q6PJG9 635 aa7.92□□□□□ -1.14
SYNE1-206ENST00000367253 Q6ZN92 141 aa7.92□□□□□ -1.14
SYNE1-206ENST00000367253 TIFABQ6ZNK6 161 aa7.92□□□□□ -1.14
SYNE1-206ENST00000367253 RNF130Q86XS8 419 aa7.92□□□□□ -1.14
SYNE1-206ENST00000367253 SULF2Q8IWU5 870 aa7.92□□□□□ -1.14
SYNE1-206ENST00000367253 PNPLA1Q8N8W4 532 aa7.92□□□□□ -1.14
SYNE1-206ENST00000367253 RHOXF1Q8NHV9 184 aa7.92□□□□□ -1.14
SYNE1-206ENST00000367253 KLHL21Q9UJP4 597 aa7.92□□□□□ -1.14
SYNE1-206ENST00000367253 LRRC37AA6NMS7 1700 aa7.92□□□□□ -1.14
SYNE1-206ENST00000367253 SVILO95425 2214 aa7.92□□□□□ -1.14
SYNE1-206ENST00000367253 MT-ND4LP03901 98 aa7.92□□□□□ -1.14
SYNE1-206ENST00000367253 BMP2P12643 396 aa7.92□□□□□ -1.14
SYNE1-206ENST00000367253 CNR1P21554 472 aa7.92□□□□□ -1.14
SYNE1-206ENST00000367253 ACRV1P26436 265 aa7.92□□□□□ -1.14
SYNE1-206ENST00000367253 GIFP27352 417 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms