RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 BCO1Q9HAY6 547 aa11□□□□□ -0.65
CDC42BPA-203ENST00000366766 MYEF2Q9P2K5 600 aaKnown RBP11□□□□□ -0.65
CDC42BPA-203ENST00000366766 CD1CP29017 333 aa10.99□□□□□ -0.65
CDC42BPA-203ENST00000366766 RNLSQ5VYX0 342 aa10.99□□□□□ -0.65
CDC42BPA-203ENST00000366766 NUDT9Q9BW91 350 aa10.99□□□□□ -0.65
CDC42BPA-203ENST00000366766 BARHL1Q9BZE3 327 aa10.99□□□□□ -0.65
CDC42BPA-203ENST00000366766 IKZF5Q9H5V7 419 aa10.99□□□□□ -0.65
CDC42BPA-203ENST00000366766 TAS2R5Q9NYW4 299 aa10.99□□□□□ -0.65
CDC42BPA-203ENST00000366766 RIF1Q5UIP0 2472 aaKnown RBP10.99□□□□□ -0.65
CDC42BPA-203ENST00000366766 PRSS37A4D1T9 235 aa10.99□□□□□ -0.65
CDC42BPA-203ENST00000366766 ST8SIA3O43173 380 aa10.99□□□□□ -0.65
CDC42BPA-203ENST00000366766 SIGLEC6O43699 453 aa10.99□□□□□ -0.65
CDC42BPA-203ENST00000366766 FABP1P07148 127 aa10.99□□□□□ -0.65
CDC42BPA-203ENST00000366766 HMGA2P52926 109 aa10.99□□□□□ -0.65
CDC42BPA-203ENST00000366766 SEMA6DQ8NFY4 1073 aa10.99□□□□□ -0.65
CDC42BPA-203ENST00000366766 UQCC2Q9BRT2 126 aa10.99□□□□□ -0.65
CDC42BPA-203ENST00000366766 PLEKHA2Q9HB19 425 aa10.99□□□□□ -0.65
CDC42BPA-203ENST00000366766 TRPM7Q96QT4 1865 aa10.99□□□□□ -0.65
CDC42BPA-203ENST00000366766 SERPINE3A8MV23 424 aa10.99□□□□□ -0.65
CDC42BPA-203ENST00000366766 OR13C8Q8NGS7 320 aa10.99□□□□□ -0.65
CDC42BPA-203ENST00000366766 PP6455Q8WZ26 134 aa10.99□□□□□ -0.65
CDC42BPA-203ENST00000366766 PDCD1LG2Q9BQ51 273 aa10.99□□□□□ -0.65
CDC42BPA-203ENST00000366766 COMMD1Q8N668 190 aa10.99□□□□□ -0.65
CDC42BPA-203ENST00000366766 OR1E3Q8WZA6 343 aa10.99□□□□□ -0.65
CDC42BPA-203ENST00000366766 R4GMQ9 66 aa10.99□□□□□ -0.65
CDC42BPA-203ENST00000366766 KCNE1BA0A087WTH5 132 aa10.99□□□□□ -0.65
CDC42BPA-203ENST00000366766 A0A1W2PPH5 198 aa10.99□□□□□ -0.65
CDC42BPA-203ENST00000366766 K7ESM1 405 aa10.99□□□□□ -0.65
CDC42BPA-203ENST00000366766 SGCEO43556 437 aa10.99□□□□□ -0.65
CDC42BPA-203ENST00000366766 RPS2P15880 293 aaKnown RBP10.99□□□□□ -0.65
CDC42BPA-203ENST00000366766 ARR3P36575 388 aa10.99□□□□□ -0.65
CDC42BPA-203ENST00000366766 ZNF485Q8NCK3 441 aa10.99□□□□□ -0.65
CDC42BPA-203ENST00000366766 HCSTQ9UBK5 93 aa10.99□□□□□ -0.65
CDC42BPA-203ENST00000366766 ARGFXA6NJG6 315 aa10.99□□□□□ -0.65
CDC42BPA-203ENST00000366766 TBC1D28Q2M2D7 210 aa10.99□□□□□ -0.65
CDC42BPA-203ENST00000366766 UQCC3Q6UW78 93 aa10.99□□□□□ -0.65
CDC42BPA-203ENST00000366766 TMUB2Q71RG4 321 aa10.99□□□□□ -0.65
CDC42BPA-203ENST00000366766 ARRDC1Q8N5I2 433 aa10.99□□□□□ -0.65
CDC42BPA-203ENST00000366766 ZNF511Q8NB15 262 aa10.99□□□□□ -0.65
CDC42BPA-203ENST00000366766 SRRQ9GZT4 340 aa10.99□□□□□ -0.65
CDC42BPA-203ENST00000366766 OR1M1Q8NGA1 313 aa10.99□□□□□ -0.65
CDC42BPA-203ENST00000366766 MED16Q9Y2X0 877 aa10.99□□□□□ -0.65
CDC42BPA-203ENST00000366766 SELENOFO60613 162 aa10.99□□□□□ -0.65
CDC42BPA-203ENST00000366766 GABRB1P18505 474 aa10.99□□□□□ -0.65
CDC42BPA-203ENST00000366766 GLIPR1L1Q6UWM5 242 aa10.99□□□□□ -0.65
CDC42BPA-203ENST00000366766 ALKAL2Q6UX46 152 aa10.99□□□□□ -0.65
CDC42BPA-203ENST00000366766 B3GLCTQ6Y288 498 aa10.99□□□□□ -0.65
CDC42BPA-203ENST00000366766 LHFPL2Q6ZUX7 228 aa10.99□□□□□ -0.65
CDC42BPA-203ENST00000366766 MGMTP16455 207 aa10.98□□□□□ -0.65
CDC42BPA-203ENST00000366766 PRKACAP17612 351 aa10.98□□□□□ -0.65
CDC42BPA-203ENST00000366766 AADACP22760 399 aa10.98□□□□□ -0.65
CDC42BPA-203ENST00000366766 BTN1A1Q13410 526 aa10.98□□□□□ -0.65
CDC42BPA-203ENST00000366766 HNF4GQ14541 408 aa10.98□□□□□ -0.65
CDC42BPA-203ENST00000366766 FOXB2Q5VYV0 432 aa10.98□□□□□ -0.65
CDC42BPA-203ENST00000366766 CYSLTR2Q9NS75 346 aa10.98□□□□□ -0.65
CDC42BPA-203ENST00000366766 NPIPB8E9PQR5 432 aa10.98□□□□□ -0.65
CDC42BPA-203ENST00000366766 MT-ND4LP03901 98 aa10.98□□□□□ -0.65
CDC42BPA-203ENST00000366766 IL5P05113 134 aa10.98□□□□□ -0.65
CDC42BPA-203ENST00000366766 PXDC1Q5TGL8 231 aa10.98□□□□□ -0.65
CDC42BPA-203ENST00000366766 ANGPTL5Q86XS5 388 aa10.98□□□□□ -0.65
CDC42BPA-203ENST00000366766 OR10J5Q8NHC4 309 aa10.98□□□□□ -0.65
CDC42BPA-203ENST00000366766 DCLRE1CQ96SD1 692 aaKnown RBP10.98□□□□□ -0.65
CDC42BPA-203ENST00000366766 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.98□□□□□ -0.65
CDC42BPA-203ENST00000366766 FOXJ3Q9UPW0 622 aa10.98□□□□□ -0.65
CDC42BPA-203ENST00000366766 RBP2P50120 134 aa10.98□□□□□ -0.65
CDC42BPA-203ENST00000366766 CCR6P51684 374 aa10.98□□□□□ -0.65
CDC42BPA-203ENST00000366766 CPEB3Q8NE35 698 aaKnown RBP10.98□□□□□ -0.65
CDC42BPA-203ENST00000366766 XRCC2O43543 280 aa10.98□□□□□ -0.65
CDC42BPA-203ENST00000366766 PRSS23O95084 383 aa10.98□□□□□ -0.65
CDC42BPA-203ENST00000366766 MBP02144 154 aa10.98□□□□□ -0.65
CDC42BPA-203ENST00000366766 PTGER4P35408 488 aa10.98□□□□□ -0.65
CDC42BPA-203ENST00000366766 SNCAP37840 140 aa10.98□□□□□ -0.65
CDC42BPA-203ENST00000366766 PLGLAQ15195 96 aa10.98□□□□□ -0.65
CDC42BPA-203ENST00000366766 C12orf73Q69YU5 71 aa10.98□□□□□ -0.65
CDC42BPA-203ENST00000366766 CPNE4Q96A23 557 aaPredicted RBP10.98□□□□□ -0.65
CDC42BPA-203ENST00000366766 SIT1Q9Y3P8 196 aa10.98□□□□□ -0.65
CDC42BPA-203ENST00000366766 A6NIN4 97 aa10.98□□□□□ -0.65
CDC42BPA-203ENST00000366766 HPNP05981 417 aa10.98□□□□□ -0.65
CDC42BPA-203ENST00000366766 PAN3Q58A45 887 aaKnown RBP10.98□□□□□ -0.65
CDC42BPA-203ENST00000366766 NKAIN4Q8IVV8 208 aa10.98□□□□□ -0.65
CDC42BPA-203ENST00000366766 KLF15Q9UIH9 416 aa10.98□□□□□ -0.65
CDC42BPA-203ENST00000366766 H3BQ06 376 aaPredicted RBP10.98□□□□□ -0.65
CDC42BPA-203ENST00000366766 EPXP11678 715 aa10.98□□□□□ -0.65
CDC42BPA-203ENST00000366766 ACSM5Q6NUN0 579 aa10.98□□□□□ -0.65
CDC42BPA-203ENST00000366766 OR51S1Q8NGJ8 323 aa10.98□□□□□ -0.65
CDC42BPA-203ENST00000366766 HMGCLL1Q8TB92 370 aa10.98□□□□□ -0.65
CDC42BPA-203ENST00000366766 ZPBPQ9BS86 351 aa10.98□□□□□ -0.65
CDC42BPA-203ENST00000366766 IER2Q9BTL4 223 aa10.98□□□□□ -0.65
CDC42BPA-203ENST00000366766 GALNT9Q9HCQ5 603 aa10.98□□□□□ -0.65
CDC42BPA-203ENST00000366766 ACOXLQ9NUZ1 547 aa10.98□□□□□ -0.65
CDC42BPA-203ENST00000366766 GNG12Q9UBI6 72 aa10.98□□□□□ -0.65
CDC42BPA-203ENST00000366766 POMT2Q9UKY4 750 aa10.98□□□□□ -0.65
CDC42BPA-203ENST00000366766 AGPAT2O15120 278 aa10.98□□□□□ -0.65
CDC42BPA-203ENST00000366766 LAP3P28838 519 aa10.98□□□□□ -0.65
CDC42BPA-203ENST00000366766 PTGER1P34995 402 aa10.98□□□□□ -0.65
CDC42BPA-203ENST00000366766 LINC01599Q8WXQ3 324 aa10.98□□□□□ -0.65
CDC42BPA-203ENST00000366766 APH1AQ96BI3 265 aa10.98□□□□□ -0.65
CDC42BPA-203ENST00000366766 ARHGDIGQ99819 225 aa10.98□□□□□ -0.65
CDC42BPA-203ENST00000366766 TRAPPC2LQ9UL33 140 aa10.98□□□□□ -0.65
CDC42BPA-203ENST00000366766 TIMM10BQ9Y5J6 103 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms