RNA–Protein interactions for RNA: ENST00000364047.1

RNU6-553P-201, Transcript of RNA, U6 small nuclear 553, pseudogene, humanhuman

BASIC

Gene RNU6-553P, Length 96 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-553P-201ENST00000364047 FUT5Q11128 374 aa1.67□□□□□ -2.14
RNU6-553P-201ENST00000364047 GK3PQ14409 553 aa1.67□□□□□ -2.14
RNU6-553P-201ENST00000364047 CCDC92Q53HC0 331 aaPredicted RBP1.67□□□□□ -2.14
RNU6-553P-201ENST00000364047 MPV17L2Q567V2 206 aa1.67□□□□□ -2.14
RNU6-553P-201ENST00000364047 AVPI1Q5T686 147 aa1.67□□□□□ -2.14
RNU6-553P-201ENST00000364047 ANKRD26P1Q6NSI1 321 aa1.67□□□□□ -2.14
RNU6-553P-201ENST00000364047 PMF1Q6P1K2 205 aa1.67□□□□□ -2.14
RNU6-553P-201ENST00000364047 CASP12Q6UXS9 341 aa1.67□□□□□ -2.14
RNU6-553P-201ENST00000364047 SPANXA2-OT1Q8N9U9 137 aa1.67□□□□□ -2.14
RNU6-553P-201ENST00000364047 SLC39A3Q9BRY0 314 aa1.67□□□□□ -2.14
RNU6-553P-201ENST00000364047 ANGPTL4Q9BY76 406 aa1.67□□□□□ -2.14
RNU6-553P-201ENST00000364047 FGF23Q9GZV9 251 aaPredicted RBP1.67□□□□□ -2.14
RNU6-553P-201ENST00000364047 GOLT1BQ9Y3E0 138 aa1.67□□□□□ -2.14
RNU6-553P-201ENST00000364047 NPTNQ9Y639 398 aa1.67□□□□□ -2.14
RNU6-553P-201ENST00000364047 MTX2O75431 263 aa1.66□□□□□ -2.14
RNU6-553P-201ENST00000364047 GUCA1CO95843 209 aa1.66□□□□□ -2.14
RNU6-553P-201ENST00000364047 GLAP06280 429 aa1.66□□□□□ -2.14
RNU6-553P-201ENST00000364047 KITLGP21583 273 aa1.66□□□□□ -2.14
RNU6-553P-201ENST00000364047 SSR4P51571 173 aa1.66□□□□□ -2.14
RNU6-553P-201ENST00000364047 PRMT2P55345 433 aa1.66□□□□□ -2.14
RNU6-553P-201ENST00000364047 RBX1P62877 108 aa1.66□□□□□ -2.14
RNU6-553P-201ENST00000364047 MRPS22P82650 360 aaKnown RBP1.66□□□□□ -2.14
RNU6-553P-201ENST00000364047 CDK5Q00535 292 aa1.66□□□□□ -2.14
RNU6-553P-201ENST00000364047 PRKCDQ05655 676 aa1.66□□□□□ -2.14
RNU6-553P-201ENST00000364047 RNASE13Q5GAN3 156 aaKnown RBP1.66□□□□□ -2.14
RNU6-553P-201ENST00000364047 TTLQ8NG68 377 aa1.66□□□□□ -2.14
RNU6-553P-201ENST00000364047 OR1S2Q8NGQ3 325 aa1.66□□□□□ -2.14
RNU6-553P-201ENST00000364047 UBE2Q2Q8WVN8 375 aa1.66□□□□□ -2.14
RNU6-553P-201ENST00000364047 SLC41A3Q96GZ6 507 aa1.66□□□□□ -2.14
RNU6-553P-201ENST00000364047 HSD17B10Q99714 261 aaKnown RBP1.66□□□□□ -2.14
RNU6-553P-201ENST00000364047 SGK2Q9HBY8 427 aa1.66□□□□□ -2.14
RNU6-553P-201ENST00000364047 C8orf17Q9NRJ1 99 aa1.66□□□□□ -2.14
RNU6-553P-201ENST00000364047 ETNK2Q9NVF9 386 aa1.66□□□□□ -2.14
RNU6-553P-201ENST00000364047 ZNF639Q9UID6 485 aa1.66□□□□□ -2.14
RNU6-553P-201ENST00000364047 CLEC4AQ9UMR7 237 aa1.66□□□□□ -2.14
RNU6-553P-201ENST00000364047 ATP6V0A2Q9Y487 856 aa1.66□□□□□ -2.14
RNU6-553P-201ENST00000364047 KCNE3Q9Y6H6 103 aa1.66□□□□□ -2.14
RNU6-553P-201ENST00000364047 SHANK1Q9Y566 2161 aa1.65□□□□□ -2.14
RNU6-553P-201ENST00000364047 DOCK8Q8NF50 2099 aa1.65□□□□□ -2.14
RNU6-553P-201ENST00000364047 SHROOM3Q8TF72 1996 aa1.65□□□□□ -2.14
RNU6-553P-201ENST00000364047 TRAV19A0A0A6YYK7 116 aa1.65□□□□□ -2.15
RNU6-553P-201ENST00000364047 A0A1B0GW55 424 aa1.65□□□□□ -2.15
RNU6-553P-201ENST00000364047 CLRN2A0PK11 232 aa1.65□□□□□ -2.15
RNU6-553P-201ENST00000364047 FAM47DPA6NHR8 397 aa1.65□□□□□ -2.15
RNU6-553P-201ENST00000364047 GPR89AB7ZAQ6 455 aa1.65□□□□□ -2.15
RNU6-553P-201ENST00000364047 H0YCG3 227 aa1.65□□□□□ -2.15
RNU6-553P-201ENST00000364047 L7N2F9 121 aa1.65□□□□□ -2.15
RNU6-553P-201ENST00000364047 CDC7O00311 574 aa1.65□□□□□ -2.15
RNU6-553P-201ENST00000364047 CLIC3O95833 236 aa1.65□□□□□ -2.15
RNU6-553P-201ENST00000364047 GPR89BP0CG08 455 aa1.65□□□□□ -2.15
RNU6-553P-201ENST00000364047 DUX4L2P0CJ85 424 aa1.65□□□□□ -2.15
RNU6-553P-201ENST00000364047 DUX4L3P0CJ86 424 aa1.65□□□□□ -2.15
RNU6-553P-201ENST00000364047 DUX4L5P0CJ88 424 aa1.65□□□□□ -2.15
RNU6-553P-201ENST00000364047 DUX4L6P0CJ89 424 aa1.65□□□□□ -2.15
RNU6-553P-201ENST00000364047 DUX4L7P0CJ90 424 aa1.65□□□□□ -2.15
RNU6-553P-201ENST00000364047 HCAR3P49019 387 aa1.65□□□□□ -2.15
RNU6-553P-201ENST00000364047 CEBPDP49716 269 aaPredicted RBP1.65□□□□□ -2.15
RNU6-553P-201ENST00000364047 CCNG1P51959 295 aa1.65□□□□□ -2.15
RNU6-553P-201ENST00000364047 CDKN2DP55273 166 aa1.65□□□□□ -2.15
RNU6-553P-201ENST00000364047 CCNA1P78396 465 aa1.65□□□□□ -2.15
RNU6-553P-201ENST00000364047 RCAN2Q14206 197 aa1.65□□□□□ -2.15
RNU6-553P-201ENST00000364047 TGFBIQ15582 683 aa1.65□□□□□ -2.15
RNU6-553P-201ENST00000364047 ZNF664Q8N3J9 261 aa1.65□□□□□ -2.15
RNU6-553P-201ENST00000364047 MS4A15Q8N5U1 240 aa1.65□□□□□ -2.15
RNU6-553P-201ENST00000364047 ZFP41Q8N8Y5 198 aa1.65□□□□□ -2.15
RNU6-553P-201ENST00000364047 ZNF680Q8NEM1 530 aa1.65□□□□□ -2.15
RNU6-553P-201ENST00000364047 DNAJC1Q96KC8 554 aaKnown RBP1.65□□□□□ -2.15
RNU6-553P-201ENST00000364047 PKNOX2Q96KN3 472 aa1.65□□□□□ -2.15
RNU6-553P-201ENST00000364047 COL21A1Q96P44 957 aa1.65□□□□□ -2.15
RNU6-553P-201ENST00000364047 SHANK2-AS3Q9BTD1 123 aa1.65□□□□□ -2.15
RNU6-553P-201ENST00000364047 VCX2Q9H322 139 aa1.65□□□□□ -2.15
RNU6-553P-201ENST00000364047 DHX35Q9H5Z1 703 aaKnown RBP1.65□□□□□ -2.15
RNU6-553P-201ENST00000364047 EXOSC4Q9NPD3 245 aaKnown RBP1.65□□□□□ -2.15
RNU6-553P-201ENST00000364047 DUX4Q9UBX2 424 aa1.65□□□□□ -2.15
RNU6-553P-201ENST00000364047 SLC7A8Q9UHI5 535 aa1.65□□□□□ -2.15
RNU6-553P-201ENST00000364047 SIGLEC7Q9Y286 467 aa1.65□□□□□ -2.15
RNU6-553P-201ENST00000364047 ZNF878C9JN71 531 aa1.64□□□□□ -2.15
RNU6-553P-201ENST00000364047 H6PDO95479 791 aa1.64□□□□□ -2.15
RNU6-553P-201ENST00000364047 IGLV3-25P01717 112 aa1.64□□□□□ -2.15
RNU6-553P-201ENST00000364047 ZNF250P15622 560 aa1.64□□□□□ -2.15
RNU6-553P-201ENST00000364047 DESP17661 470 aa1.64□□□□□ -2.15
RNU6-553P-201ENST00000364047 RAB3AP20336 220 aa1.64□□□□□ -2.15
RNU6-553P-201ENST00000364047 P2RX1P51575 399 aa1.64□□□□□ -2.15
RNU6-553P-201ENST00000364047 VSX2P58304 361 aaPredicted RBP1.64□□□□□ -2.15
RNU6-553P-201ENST00000364047 SLC25A11Q02978 314 aaKnown RBP1.64□□□□□ -2.15
RNU6-553P-201ENST00000364047 TCEAL5Q5H9L2 206 aa1.64□□□□□ -2.15
RNU6-553P-201ENST00000364047 C6orf226Q5I0X4 101 aa1.64□□□□□ -2.15
RNU6-553P-201ENST00000364047 PLPPR1Q8TBJ4 325 aa1.64□□□□□ -2.15
RNU6-553P-201ENST00000364047 KLF14Q8TD94 323 aaPredicted RBP1.64□□□□□ -2.15
RNU6-553P-201ENST00000364047 TCEAL3Q969E4 200 aa1.64□□□□□ -2.15
RNU6-553P-201ENST00000364047 RSG1Q9BU20 258 aa1.64□□□□□ -2.15
RNU6-553P-201ENST00000364047 LSM7Q9UK45 103 aaKnown RBP1.64□□□□□ -2.15
RNU6-553P-201ENST00000364047 IKZF2Q9UKS7 526 aa1.64□□□□□ -2.15
RNU6-553P-201ENST00000364047 IGLV1-36A0A0B4J1U3 117 aa1.63□□□□□ -2.15
RNU6-553P-201ENST00000364047 IGHV7-4-1A0A0J9YVY3 117 aa1.63□□□□□ -2.15
RNU6-553P-201ENST00000364047 GLYATL1P3A0A0U1RQE8 302 aa1.63□□□□□ -2.15
RNU6-553P-201ENST00000364047 OR52A4PA6NMU1 304 aa1.63□□□□□ -2.15
RNU6-553P-201ENST00000364047 RDH16O75452 317 aa1.63□□□□□ -2.15
RNU6-553P-201ENST00000364047 SLC22A5O76082 557 aa1.63□□□□□ -2.15
RNU6-553P-201ENST00000364047 CYB5R3P00387 301 aaPredicted RBP1.63□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms