RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 MNTQ99583 582 aa12.02□□□□□ -0.49
NSMCE1-201ENST00000361439 KCNS3Q9BQ31 491 aa12.02□□□□□ -0.49
NSMCE1-201ENST00000361439 HDHD2Q9H0R4 259 aa12.02□□□□□ -0.49
NSMCE1-201ENST00000361439 LHFPL6Q9Y693 200 aa12.02□□□□□ -0.49
NSMCE1-201ENST00000361439 CENPEQ02224 2701 aa12.02□□□□□ -0.49
NSMCE1-201ENST00000361439 UNC79Q9P2D8 2635 aa12.01□□□□□ -0.49
NSMCE1-201ENST00000361439 SIAH2O43255 324 aa12.01□□□□□ -0.49
NSMCE1-201ENST00000361439 SGCEO43556 437 aa12.01□□□□□ -0.49
NSMCE1-201ENST00000361439 GPANK1O95872 356 aa12.01□□□□□ -0.49
NSMCE1-201ENST00000361439 CECR9P0C854 216 aa12.01□□□□□ -0.49
NSMCE1-201ENST00000361439 PATE4P0C8F1 98 aa12.01□□□□□ -0.49
NSMCE1-201ENST00000361439 LOXP28300 417 aaPredicted RBP12.01□□□□□ -0.49
NSMCE1-201ENST00000361439 APLNRP35414 380 aa12.01□□□□□ -0.49
NSMCE1-201ENST00000361439 IDH3GP51553 393 aaPredicted RBP12.01□□□□□ -0.49
NSMCE1-201ENST00000361439 CDH11P55287 796 aa12.01□□□□□ -0.49
NSMCE1-201ENST00000361439 NAAAQ02083 359 aa12.01□□□□□ -0.49
NSMCE1-201ENST00000361439 TLE4Q04727 773 aa12.01□□□□□ -0.49
NSMCE1-201ENST00000361439 RAB35Q15286 201 aa12.01□□□□□ -0.49
NSMCE1-201ENST00000361439 MEP1BQ16820 701 aa12.01□□□□□ -0.49
NSMCE1-201ENST00000361439 TBC1D28Q2M2D7 210 aa12.01□□□□□ -0.49
NSMCE1-201ENST00000361439 ALKBH2Q6NS38 261 aa12.01□□□□□ -0.49
NSMCE1-201ENST00000361439 UNQ6126/PRO20091Q6UXV3 157 aa12.01□□□□□ -0.49
NSMCE1-201ENST00000361439 ZNF584Q8IVC4 421 aa12.01□□□□□ -0.49
NSMCE1-201ENST00000361439 ZNF295-AS1Q8N0V1 137 aa12.01□□□□□ -0.49
NSMCE1-201ENST00000361439 ZNF511Q8NB15 262 aa12.01□□□□□ -0.49
NSMCE1-201ENST00000361439 SLC30A7Q8NEW0 376 aa12.01□□□□□ -0.49
NSMCE1-201ENST00000361439 OR4F15Q8NGB8 312 aa12.01□□□□□ -0.49
NSMCE1-201ENST00000361439 HTRA1Q92743 480 aa12.01□□□□□ -0.49
NSMCE1-201ENST00000361439 PIK3IP1Q96FE7 263 aa12.01□□□□□ -0.49
NSMCE1-201ENST00000361439 ZNF582Q96NG8 517 aaPredicted RBP12.01□□□□□ -0.49
NSMCE1-201ENST00000361439 FOXN4Q96NZ1 517 aa12.01□□□□□ -0.49
NSMCE1-201ENST00000361439 C1QTNF6Q9BXI9 259 aa12.01□□□□□ -0.49
NSMCE1-201ENST00000361439 YIPF3Q9GZM5 350 aa12.01□□□□□ -0.49
NSMCE1-201ENST00000361439 WNT5BQ9H1J7 359 aa12.01□□□□□ -0.49
NSMCE1-201ENST00000361439 WDR76Q9H967 626 aa12.01□□□□□ -0.49
NSMCE1-201ENST00000361439 NOX3Q9HBY0 568 aa12.01□□□□□ -0.49
NSMCE1-201ENST00000361439 PLEK2Q9NYT0 353 aa12.01□□□□□ -0.49
NSMCE1-201ENST00000361439 GDF2Q9UK05 429 aaPredicted RBP12.01□□□□□ -0.49
NSMCE1-201ENST00000361439 RNF115Q9Y4L5 304 aa12.01□□□□□ -0.49
NSMCE1-201ENST00000361439 TMEM14AQ9Y6G1 99 aa12.01□□□□□ -0.49
NSMCE1-201ENST00000361439 ASH1LQ9NR48 2969 aaKnown RBP12.01□□□□□ -0.49
NSMCE1-201ENST00000361439 FLNBO75369 2602 aaKnown RBP12□□□□□ -0.49
NSMCE1-201ENST00000361439 IGHV2OR16-5A0A0B4J2B6 119 aa12□□□□□ -0.49
NSMCE1-201ENST00000361439 CCDC182A6NF36 153 aa12□□□□□ -0.49
NSMCE1-201ENST00000361439 OR6C6A6NF89 314 aa12□□□□□ -0.49
NSMCE1-201ENST00000361439 TVP23AA6NH52 213 aa12□□□□□ -0.49
NSMCE1-201ENST00000361439 M0R129 80 aa12□□□□□ -0.49
NSMCE1-201ENST00000361439 ABCD4O14678 606 aa12□□□□□ -0.49
NSMCE1-201ENST00000361439 SYNGR3O43761 229 aa12□□□□□ -0.49
NSMCE1-201ENST00000361439 ICMTO60725 284 aa12□□□□□ -0.49
NSMCE1-201ENST00000361439 ZNF35P13682 527 aa12□□□□□ -0.49
NSMCE1-201ENST00000361439 STOMP27105 288 aa12□□□□□ -0.49
NSMCE1-201ENST00000361439 PCSK6P29122 969 aa12□□□□□ -0.49
NSMCE1-201ENST00000361439 NUDT6P53370 316 aa12□□□□□ -0.49
NSMCE1-201ENST00000361439 AQP4P55087 323 aa12□□□□□ -0.49
NSMCE1-201ENST00000361439 RAB39AQ14964 217 aa12□□□□□ -0.49
NSMCE1-201ENST00000361439 ELFN2Q5R3F8 820 aa12□□□□□ -0.49
NSMCE1-201ENST00000361439 FBXW10Q5XX13 1052 aa12□□□□□ -0.49
NSMCE1-201ENST00000361439 USP51Q70EK9 711 aa12□□□□□ -0.49
NSMCE1-201ENST00000361439 VASH1Q7L8A9 365 aaPredicted RBP12□□□□□ -0.49
NSMCE1-201ENST00000361439 SLC16A9Q7RTY1 509 aa12□□□□□ -0.49
NSMCE1-201ENST00000361439 ERI1Q8IV48 349 aaKnown RBP12□□□□□ -0.49
NSMCE1-201ENST00000361439 C8orf59Q8N0T1 100 aaPredicted RBP12□□□□□ -0.49
NSMCE1-201ENST00000361439 CPEB3Q8NE35 698 aaKnown RBP12□□□□□ -0.49
NSMCE1-201ENST00000361439 NUP37Q8NFH4 326 aa12□□□□□ -0.49
NSMCE1-201ENST00000361439 ZMYND19Q96E35 227 aaPredicted RBP12□□□□□ -0.49
NSMCE1-201ENST00000361439 DCLRE1CQ96SD1 692 aaKnown RBP12□□□□□ -0.49
NSMCE1-201ENST00000361439 CNN2Q99439 309 aaKnown RBP12□□□□□ -0.49
NSMCE1-201ENST00000361439 COQ7Q99807 217 aa12□□□□□ -0.49
NSMCE1-201ENST00000361439 CLN6Q9NWW5 311 aa12□□□□□ -0.49
NSMCE1-201ENST00000361439 SPEF1Q9Y4P9 236 aa12□□□□□ -0.49
NSMCE1-201ENST00000361439 ABCA4P78363 2273 aa12□□□□□ -0.49
NSMCE1-201ENST00000361439 PRR14LQ5THK1 2151 aa11.99□□□□□ -0.49
NSMCE1-201ENST00000361439 J3QW42 95 aa11.99□□□□□ -0.49
NSMCE1-201ENST00000361439 PHYHO14832 338 aa11.99□□□□□ -0.49
NSMCE1-201ENST00000361439 RER1O15258 196 aa11.99□□□□□ -0.49
NSMCE1-201ENST00000361439 DOK2O60496 412 aa11.99□□□□□ -0.49
NSMCE1-201ENST00000361439 TUBG1P23258 451 aa11.99□□□□□ -0.49
NSMCE1-201ENST00000361439 SLC15A1P46059 708 aa11.99□□□□□ -0.49
NSMCE1-201ENST00000361439 MTNR1AP48039 350 aa11.99□□□□□ -0.49
NSMCE1-201ENST00000361439 GDI2P50395 445 aaKnown RBP11.99□□□□□ -0.49
NSMCE1-201ENST00000361439 ISL1P61371 349 aa11.99□□□□□ -0.49
NSMCE1-201ENST00000361439 CCDC92Q53HC0 331 aaPredicted RBP11.99□□□□□ -0.49
NSMCE1-201ENST00000361439 ARL9Q6T311 187 aa11.99□□□□□ -0.49
NSMCE1-201ENST00000361439 IZUMO2Q6UXV1 221 aa11.99□□□□□ -0.49
NSMCE1-201ENST00000361439 DPY19L4Q7Z388 723 aa11.99□□□□□ -0.49
NSMCE1-201ENST00000361439 OR6N2Q8NGY6 317 aa11.99□□□□□ -0.49
NSMCE1-201ENST00000361439 OR1F12Q8NHA8 337 aa11.99□□□□□ -0.49
NSMCE1-201ENST00000361439 OTOSQ8NHW6 89 aa11.99□□□□□ -0.49
NSMCE1-201ENST00000361439 ASB17Q8WXJ9 295 aa11.99□□□□□ -0.49
NSMCE1-201ENST00000361439 POM121L2Q96KW2 1035 aa11.99□□□□□ -0.49
NSMCE1-201ENST00000361439 MYCBPQ99417 103 aaPredicted RBP11.99□□□□□ -0.49
NSMCE1-201ENST00000361439 CLEC4MQ9H2X3 399 aaPredicted RBP11.99□□□□□ -0.49
NSMCE1-201ENST00000361439 TUBG2Q9NRH3 451 aa11.99□□□□□ -0.49
NSMCE1-201ENST00000361439 DDX28Q9NUL7 540 aaKnown RBP11.99□□□□□ -0.49
NSMCE1-201ENST00000361439 RAB26Q9ULW5 256 aa11.99□□□□□ -0.49
NSMCE1-201ENST00000361439 RPL36Q9Y3U8 105 aaKnown RBP11.99□□□□□ -0.49
NSMCE1-201ENST00000361439 PCDHGB1Q9Y5G3 927 aa11.99□□□□□ -0.49
NSMCE1-201ENST00000361439 SHISA9B4DS77 424 aa11.98□□□□□ -0.49
NSMCE1-201ENST00000361439 ENTPD6O75354 484 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms