RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 J3KTA2 159 aa8.55□□□□□ -1.04
VPS13A-203ENST00000360280 FFAR4Q5NUL3 377 aa8.55□□□□□ -1.04
VPS13A-203ENST00000360280 UTP23Q9BRU9 249 aaKnown RBP8.55□□□□□ -1.04
VPS13A-203ENST00000360280 GJB5O95377 273 aa8.55□□□□□ -1.04
VPS13A-203ENST00000360280 FPR3P25089 353 aa8.55□□□□□ -1.04
VPS13A-203ENST00000360280 PAX5Q02548 391 aa8.55□□□□□ -1.04
VPS13A-203ENST00000360280 CPEB2Q7Z5Q1 589 aaKnown RBP8.55□□□□□ -1.04
VPS13A-203ENST00000360280 MENTQ9BUN1 341 aa8.55□□□□□ -1.04
VPS13A-203ENST00000360280 ULBP3Q9BZM4 244 aa8.55□□□□□ -1.04
VPS13A-203ENST00000360280 RPS23P62266 143 aaKnown RBP8.55□□□□□ -1.04
VPS13A-203ENST00000360280 RPEL1Q2QD12 228 aa8.55□□□□□ -1.04
VPS13A-203ENST00000360280 GLIPR1L1Q6UWM5 242 aa8.55□□□□□ -1.04
VPS13A-203ENST00000360280 CYHR1Q6ZMK1 362 aa8.55□□□□□ -1.04
VPS13A-203ENST00000360280 APCDD1Q8J025 514 aa8.55□□□□□ -1.04
VPS13A-203ENST00000360280 OBP2AQ9NY56 170 aa8.55□□□□□ -1.04
VPS13A-203ENST00000360280 YIF1AO95070 293 aa8.55□□□□□ -1.04
VPS13A-203ENST00000360280 HTR6P50406 440 aa8.55□□□□□ -1.04
VPS13A-203ENST00000360280 SSR4P51571 173 aa8.55□□□□□ -1.04
VPS13A-203ENST00000360280 LYSMD4Q5XG99 296 aa8.55□□□□□ -1.04
VPS13A-203ENST00000360280 DOK4Q8TEW6 326 aa8.55□□□□□ -1.04
VPS13A-203ENST00000360280 LOC102724200A0A096LPH7 203 aaPredicted RBP8.55□□□□□ -1.04
VPS13A-203ENST00000360280 PSMB2P49721 201 aa8.55□□□□□ -1.04
VPS13A-203ENST00000360280 WDR73Q6P4I2 378 aa8.55□□□□□ -1.04
VPS13A-203ENST00000360280 ZNF813Q6ZN06 617 aa8.55□□□□□ -1.04
VPS13A-203ENST00000360280 OR2AK2Q8NG84 335 aa8.55□□□□□ -1.04
VPS13A-203ENST00000360280 TIMM9Q9Y5J7 89 aa8.55□□□□□ -1.04
VPS13A-203ENST00000360280 ZNF814B7Z6K7 855 aa8.54□□□□□ -1.04
VPS13A-203ENST00000360280 MAP2K6P52564 334 aa8.54□□□□□ -1.04
VPS13A-203ENST00000360280 PMS2P11Q13670 270 aa8.54□□□□□ -1.04
VPS13A-203ENST00000360280 PMS2P1A4D2B8 440 aa8.54□□□□□ -1.04
VPS13A-203ENST00000360280 OR2A25A4D2G3 310 aa8.54□□□□□ -1.04
VPS13A-203ENST00000360280 EN2P19622 333 aaPredicted RBP8.54□□□□□ -1.04
VPS13A-203ENST00000360280 TUSC1Q2TAM9 212 aa8.54□□□□□ -1.04
VPS13A-203ENST00000360280 KHDC1LQ5JSQ8 128 aa8.54□□□□□ -1.04
VPS13A-203ENST00000360280 NPWQ8N729 165 aa8.54□□□□□ -1.04
VPS13A-203ENST00000360280 A4GALTQ9NPC4 353 aa8.54□□□□□ -1.04
VPS13A-203ENST00000360280 SHC1P29353 583 aa8.54□□□□□ -1.04
VPS13A-203ENST00000360280 P2RY2P41231 377 aa8.54□□□□□ -1.04
VPS13A-203ENST00000360280 SPANXN5Q5MJ07 72 aa8.54□□□□□ -1.04
VPS13A-203ENST00000360280 OR10AD1Q8NGE0 317 aa8.54□□□□□ -1.04
VPS13A-203ENST00000360280 PLA2G12AQ9BZM1 189 aa8.54□□□□□ -1.04
VPS13A-203ENST00000360280 MMP26Q9NRE1 261 aa8.54□□□□□ -1.04
VPS13A-203ENST00000360280 GPR173Q9NS66 373 aa8.54□□□□□ -1.04
VPS13A-203ENST00000360280 DOK2O60496 412 aa8.54□□□□□ -1.04
VPS13A-203ENST00000360280 F2P00734 622 aa8.54□□□□□ -1.04
VPS13A-203ENST00000360280 PRLHRP49683 370 aa8.54□□□□□ -1.04
VPS13A-203ENST00000360280 PPOXP50336 477 aa8.54□□□□□ -1.04
VPS13A-203ENST00000360280 EXOSC2Q13868 293 aaKnown RBP8.54□□□□□ -1.04
VPS13A-203ENST00000360280 CMBLQ96DG6 245 aa8.54□□□□□ -1.04
VPS13A-203ENST00000360280 GABARAPL1Q9H0R8 117 aa8.54□□□□□ -1.04
VPS13A-203ENST00000360280 A0A0B4J203 849 aa8.54□□□□□ -1.04
VPS13A-203ENST00000360280 HSPB2A8KAH6 182 aa8.54□□□□□ -1.04
VPS13A-203ENST00000360280 P2RY10O00398 339 aa8.54□□□□□ -1.04
VPS13A-203ENST00000360280 HS3ST1O14792 307 aa8.54□□□□□ -1.04
VPS13A-203ENST00000360280 CA12O43570 354 aa8.54□□□□□ -1.04
VPS13A-203ENST00000360280 OXA1LQ15070 435 aa8.54□□□□□ -1.04
VPS13A-203ENST00000360280 HSPB2Q16082 182 aa8.54□□□□□ -1.04
VPS13A-203ENST00000360280 TIMM29Q9BSF4 260 aa8.54□□□□□ -1.04
VPS13A-203ENST00000360280 C5P01031 1676 aa8.54□□□□□ -1.04
VPS13A-203ENST00000360280 SYT5O00445 386 aa8.54□□□□□ -1.04
VPS13A-203ENST00000360280 ST8SIA5O15466 376 aa8.54□□□□□ -1.04
VPS13A-203ENST00000360280 CD14P08571 375 aa8.54□□□□□ -1.04
VPS13A-203ENST00000360280 TPBGQ13641 420 aa8.54□□□□□ -1.04
VPS13A-203ENST00000360280 SLC35G1Q2M3R5 365 aa8.54□□□□□ -1.04
VPS13A-203ENST00000360280 DOK3Q7L591 496 aa8.54□□□□□ -1.04
VPS13A-203ENST00000360280 ZNF573Q86YE8 665 aa8.54□□□□□ -1.04
VPS13A-203ENST00000360280 GPR32P1Q8NGA4 272 aa8.54□□□□□ -1.04
VPS13A-203ENST00000360280 ZNF778Q96MU6 729 aa8.54□□□□□ -1.04
VPS13A-203ENST00000360280 PRSS16Q9NQE7 514 aa8.54□□□□□ -1.04
VPS13A-203ENST00000360280 DOT1LQ8TEK3 1739 aa8.54□□□□□ -1.04
VPS13A-203ENST00000360280 OR5G3P0C626 314 aa8.54□□□□□ -1.04
VPS13A-203ENST00000360280 S100A4P26447 101 aaKnown RBP8.54□□□□□ -1.04
VPS13A-203ENST00000360280 PCBP4P57723 403 aaKnown RBP8.54□□□□□ -1.04
VPS13A-203ENST00000360280 DRAM2Q6UX65 266 aa8.54□□□□□ -1.04
VPS13A-203ENST00000360280 NEURL3Q96EH8 262 aa8.54□□□□□ -1.04
VPS13A-203ENST00000360280 TMEM129A0AVI4 362 aa8.54□□□□□ -1.04
VPS13A-203ENST00000360280 SLC25A6P12236 298 aa8.54□□□□□ -1.04
VPS13A-203ENST00000360280 HOXC5Q00444 222 aa8.54□□□□□ -1.04
VPS13A-203ENST00000360280 SHISA6Q6ZSJ9 500 aa8.54□□□□□ -1.04
VPS13A-203ENST00000360280 ZBTB44Q8NCP5 570 aa8.54□□□□□ -1.04
VPS13A-203ENST00000360280 CA14Q9ULX7 337 aa8.54□□□□□ -1.04
VPS13A-203ENST00000360280 CDC14CA4D256 554 aa8.54□□□□□ -1.04
VPS13A-203ENST00000360280 COX7A2P2O60397 106 aa8.54□□□□□ -1.04
VPS13A-203ENST00000360280 EDN3P14138 238 aa8.54□□□□□ -1.04
VPS13A-203ENST00000360280 RBP2P50120 134 aa8.54□□□□□ -1.04
VPS13A-203ENST00000360280 GNG4P50150 75 aa8.54□□□□□ -1.04
VPS13A-203ENST00000360280 C1orf61Q13536 156 aa8.54□□□□□ -1.04
VPS13A-203ENST00000360280 Q6ZNX1 250 aa8.54□□□□□ -1.04
VPS13A-203ENST00000360280 LHFPL2Q6ZUX7 228 aa8.54□□□□□ -1.04
VPS13A-203ENST00000360280 NMNAT3Q96T66 252 aa8.54□□□□□ -1.04
VPS13A-203ENST00000360280 AP5S1Q9NUS5 200 aa8.54□□□□□ -1.04
VPS13A-203ENST00000360280 GALR1P47211 349 aa8.54□□□□□ -1.04
VPS13A-203ENST00000360280 PGGT1BP53609 377 aa8.54□□□□□ -1.04
VPS13A-203ENST00000360280 EVX2Q03828 476 aa8.54□□□□□ -1.04
VPS13A-203ENST00000360280 TMEM176BQ3YBM2 270 aaPredicted RBP8.54□□□□□ -1.04
VPS13A-203ENST00000360280 ZBTB37Q5TC79 503 aa8.54□□□□□ -1.04
VPS13A-203ENST00000360280 TMED6Q8WW62 240 aa8.54□□□□□ -1.04
VPS13A-203ENST00000360280 ELF4Q99607 663 aaPredicted RBP8.54□□□□□ -1.04
VPS13A-203ENST00000360280 DOCK2Q92608 1830 aa8.54□□□□□ -1.04
VPS13A-203ENST00000360280 TFAP2AP05549 437 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms