RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 MBOAT4Q96T53 435 aa14.69□□□□□ -0.06
COL18A1-203ENST00000359759 SLC23A1Q9UHI7 598 aa14.69□□□□□ -0.06
COL18A1-203ENST00000359759 MYH1P12882 1939 aa14.69□□□□□ -0.06
COL18A1-203ENST00000359759 MYH4Q9Y623 1939 aa14.69□□□□□ -0.06
COL18A1-203ENST00000359759 ZNF354AO60765 605 aaPredicted RBP14.69□□□□□ -0.06
COL18A1-203ENST00000359759 FPR3P25089 353 aa14.69□□□□□ -0.06
COL18A1-203ENST00000359759 SUB1P53999 127 aaKnown RBP eCLIP14.69□□□□□ -0.064e-6■■□□□ 11.9
COL18A1-203ENST00000359759 CCSMST1Q4G0I0 132 aa14.69□□□□□ -0.06
COL18A1-203ENST00000359759 MFSD12Q6NUT3 480 aa14.69□□□□□ -0.06
COL18A1-203ENST00000359759 OR8B4Q96RC9 309 aa14.69□□□□□ -0.06
COL18A1-203ENST00000359759 ATF6BQ99941 703 aa14.69□□□□□ -0.06
COL18A1-203ENST00000359759 CLSTN3Q9BQT9 956 aa14.69□□□□□ -0.06
COL18A1-203ENST00000359759 MS4A8Q9BY19 250 aa14.69□□□□□ -0.06
COL18A1-203ENST00000359759 LRRC30A6NM36 301 aa14.68□□□□□ -0.06
COL18A1-203ENST00000359759 C1QBP02746 253 aa14.68□□□□□ -0.06
COL18A1-203ENST00000359759 ZNF85Q03923 595 aa14.68□□□□□ -0.06
COL18A1-203ENST00000359759 SLCO4C1Q6ZQN7 724 aa14.68□□□□□ -0.06
COL18A1-203ENST00000359759 NEURL3Q96EH8 262 aa14.68□□□□□ -0.06
COL18A1-203ENST00000359759 UBQLN3Q9H347 655 aa14.68□□□□□ -0.06
COL18A1-203ENST00000359759 FAM96BQ9Y3D0 163 aa14.68□□□□□ -0.06
COL18A1-203ENST00000359759 DBX1A6NMT0 343 aa14.68□□□□□ -0.06
COL18A1-203ENST00000359759 FAM166BA8MTA8 275 aa14.68□□□□□ -0.06
COL18A1-203ENST00000359759 GPR171O14626 319 aa14.68□□□□□ -0.06
COL18A1-203ENST00000359759 AKR7A2O43488 359 aa14.68□□□□□ -0.06
COL18A1-203ENST00000359759 GIPP09681 153 aaPredicted RBP14.68□□□□□ -0.06
COL18A1-203ENST00000359759 C1orf140Q5VVS0 124 aa14.68□□□□□ -0.06
COL18A1-203ENST00000359759 ZNF787Q6DD87 383 aa14.68□□□□□ -0.06
COL18A1-203ENST00000359759 COMMD1Q8N668 190 aa14.68□□□□□ -0.06
COL18A1-203ENST00000359759 CTDSP1Q9GZU7 261 aa14.68□□□□□ -0.06
COL18A1-203ENST00000359759 CYBAP13498 195 aa14.68□□□□□ -0.06
COL18A1-203ENST00000359759 OR52N1Q8NH53 320 aa14.68□□□□□ -0.06
COL18A1-203ENST00000359759 TSLPQ969D9 159 aa14.68□□□□□ -0.06
COL18A1-203ENST00000359759 TRIM77I1YAP6 450 aa14.68□□□□□ -0.06
COL18A1-203ENST00000359759 ST8SIA3O43173 380 aa14.68□□□□□ -0.06
COL18A1-203ENST00000359759 ICAM2P13598 275 aa14.68□□□□□ -0.06
COL18A1-203ENST00000359759 USF1P22415 310 aaPredicted RBP14.68□□□□□ -0.06
COL18A1-203ENST00000359759 ZNF528Q3MIS6 628 aa14.68□□□□□ -0.06
COL18A1-203ENST00000359759 GJC3Q8NFK1 279 aa14.68□□□□□ -0.06
COL18A1-203ENST00000359759 ZNF586Q9NXT0 402 aa14.68□□□□□ -0.06
COL18A1-203ENST00000359759 SLCO1B1Q9Y6L6 691 aa14.68□□□□□ -0.06
COL18A1-203ENST00000359759 NAV1Q8NEY1 1877 aa14.68□□□□□ -0.06
COL18A1-203ENST00000359759 ZNF320A2RRD8 509 aa14.68□□□□□ -0.06
COL18A1-203ENST00000359759 Q6ZNX1 250 aa14.68□□□□□ -0.06
COL18A1-203ENST00000359759 DTWD2Q8NBA8 298 aa14.68□□□□□ -0.06
COL18A1-203ENST00000359759 OR4C5Q8NGB2 326 aa14.68□□□□□ -0.06
COL18A1-203ENST00000359759 OR52B4Q8NGK2 314 aa14.68□□□□□ -0.06
COL18A1-203ENST00000359759 OR51F2Q8NH61 342 aa14.68□□□□□ -0.06
COL18A1-203ENST00000359759 OR2AE1Q8NHA4 323 aa14.68□□□□□ -0.06
COL18A1-203ENST00000359759 SCGB1C2P0DMR2 95 aa14.67□□□□□ -0.06
COL18A1-203ENST00000359759 ARNTP27540 789 aa14.67□□□□□ -0.06
COL18A1-203ENST00000359759 OR1D5P58170 312 aa14.67□□□□□ -0.06
COL18A1-203ENST00000359759 ALKBH6Q3KRA9 238 aa14.67□□□□□ -0.06
COL18A1-203ENST00000359759 MFSD4AQ8N468 514 aa14.67□□□□□ -0.06
COL18A1-203ENST00000359759 GPR32P1Q8NGA4 272 aa14.67□□□□□ -0.06
COL18A1-203ENST00000359759 CHST6Q9GZX3 395 aa14.67□□□□□ -0.06
COL18A1-203ENST00000359759 NXF2Q9GZY0 626 aaKnown RBP14.67□□□□□ -0.06
COL18A1-203ENST00000359759 IGKV6D-21A0A0A0MT36 114 aa14.67□□□□□ -0.06
COL18A1-203ENST00000359759 OR2J2O76002 312 aa14.67□□□□□ -0.06
COL18A1-203ENST00000359759 ALX3O95076 343 aa14.67□□□□□ -0.06
COL18A1-203ENST00000359759 CD14P08571 375 aa14.67□□□□□ -0.06
COL18A1-203ENST00000359759 ZNF26P17031 533 aaPredicted RBP14.67□□□□□ -0.06
COL18A1-203ENST00000359759 OR2L13Q8N349 312 aa14.67□□□□□ -0.06
COL18A1-203ENST00000359759 ZNF835Q9Y2P0 537 aa14.67□□□□□ -0.06
COL18A1-203ENST00000359759 NUMA1Q14980 2115 aa14.67□□□□□ -0.06
COL18A1-203ENST00000359759 A0A1W2PPH5 198 aa14.67□□□□□ -0.06
COL18A1-203ENST00000359759 CD63P08962 238 aa14.67□□□□□ -0.06
COL18A1-203ENST00000359759 CTU2Q2VPK5 515 aaKnown RBP14.67□□□□□ -0.06
COL18A1-203ENST00000359759 SLC35D3Q5M8T2 416 aa14.67□□□□□ -0.06
COL18A1-203ENST00000359759 SYT6Q5T7P8 510 aaPredicted RBP14.67□□□□□ -0.06
COL18A1-203ENST00000359759 Q6ZSR9 355 aa14.67□□□□□ -0.06
COL18A1-203ENST00000359759 MAGT1Q9H0U3 335 aa14.67□□□□□ -0.06
COL18A1-203ENST00000359759 SLC25A32Q9H2D1 315 aa14.67□□□□□ -0.06
COL18A1-203ENST00000359759 LTB4R2Q9NPC1 389 aa14.67□□□□□ -0.06
COL18A1-203ENST00000359759 WNT11O96014 354 aa14.67□□□□□ -0.06
COL18A1-203ENST00000359759 CSNK1DP48730 415 aa14.67□□□□□ -0.06
COL18A1-203ENST00000359759 DMRTC1Q5HYR2 192 aa14.67□□□□□ -0.06
COL18A1-203ENST00000359759 NRG2O14511 850 aaPredicted RBP14.67□□□□□ -0.06
COL18A1-203ENST00000359759 H3F3AP84243 136 aa14.67□□□□□ -0.06
COL18A1-203ENST00000359759 SLC16A11Q8NCK7 471 aa14.67□□□□□ -0.06
COL18A1-203ENST00000359759 C1QTNF3Q9BXJ4 246 aa14.67□□□□□ -0.06
COL18A1-203ENST00000359759 LOC107986453A0A1B0GWG9 222 aa14.66□□□□□ -0.06
COL18A1-203ENST00000359759 C4orf47A7E2U8 309 aa14.66□□□□□ -0.06
COL18A1-203ENST00000359759 GPR12P47775 334 aa14.66□□□□□ -0.06
COL18A1-203ENST00000359759 HSF5Q4G112 596 aaPredicted RBP14.66□□□□□ -0.06
COL18A1-203ENST00000359759 HLA-CQ95604 372 aa14.66□□□□□ -0.06
COL18A1-203ENST00000359759 ACTR3CQ9C0K3 210 aaPredicted RBP14.66□□□□□ -0.06
COL18A1-203ENST00000359759 BCO1Q9HAY6 547 aa14.66□□□□□ -0.06
COL18A1-203ENST00000359759 ASH2LQ9UBL3 628 aa14.66□□□□□ -0.06
COL18A1-203ENST00000359759 CCL26Q9Y258 94 aa14.66□□□□□ -0.06
COL18A1-203ENST00000359759 FMN2Q9NZ56 1722 aa14.66□□□□□ -0.06
COL18A1-203ENST00000359759 PIAS2O75928 621 aa14.66□□□□□ -0.06
COL18A1-203ENST00000359759 PMP22Q01453 160 aa14.66□□□□□ -0.06
COL18A1-203ENST00000359759 TFAP2EQ6VUC0 442 aa14.66□□□□□ -0.06
COL18A1-203ENST00000359759 GPR37O15354 613 aa14.66□□□□□ -0.06
COL18A1-203ENST00000359759 OPRM1P35372 400 aa14.66□□□□□ -0.06
COL18A1-203ENST00000359759 BTG1P62324 171 aa14.66□□□□□ -0.06
COL18A1-203ENST00000359759 GNB2P62879 340 aa14.66□□□□□ -0.06
COL18A1-203ENST00000359759 HSF1Q00613 529 aa14.66□□□□□ -0.06
COL18A1-203ENST00000359759 OR2T2Q6IF00 324 aa14.66□□□□□ -0.06
COL18A1-203ENST00000359759 GABRG1Q8N1C3 465 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms