RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 OR2AE1Q8NHA4 323 aa16.81■□□□□ 0.28
SHANK1-202ENST00000359082 LYRM4Q9HD34 91 aa16.81■□□□□ 0.28
SHANK1-202ENST00000359082 GPR171O14626 319 aa16.8■□□□□ 0.28
SHANK1-202ENST00000359082 SAXO2Q658L1 398 aa16.8■□□□□ 0.28
SHANK1-202ENST00000359082 ANKRD16Q6P6B7 361 aa16.8■□□□□ 0.28
SHANK1-202ENST00000359082 ZFP62Q8NB50 900 aaPredicted RBP16.8■□□□□ 0.28
SHANK1-202ENST00000359082 SLC35D1Q9NTN3 355 aa16.8■□□□□ 0.28
SHANK1-202ENST00000359082 SLCO1B1Q9Y6L6 691 aa16.8■□□□□ 0.28
SHANK1-202ENST00000359082 C5orf49A4QMS7 147 aa16.8■□□□□ 0.28
SHANK1-202ENST00000359082 AQP7P3A6NL99 342 aa16.8■□□□□ 0.28
SHANK1-202ENST00000359082 ZNF724A8MTY0 619 aa16.8■□□□□ 0.28
SHANK1-202ENST00000359082 RACK1P63244 317 aaKnown RBP16.8■□□□□ 0.28
SHANK1-202ENST00000359082 ASTLQ6HA08 431 aaPredicted RBP16.8■□□□□ 0.28
SHANK1-202ENST00000359082 HIST2H3AQ71DI3 136 aa16.8■□□□□ 0.28
SHANK1-202ENST00000359082 CISD2Q8N5K1 135 aaKnown RBP16.8■□□□□ 0.28
SHANK1-202ENST00000359082 C1QTNF3Q9BXJ4 246 aa16.8■□□□□ 0.28
SHANK1-202ENST00000359082 CHD4Q14839 1912 aa16.8■□□□□ 0.28
SHANK1-202ENST00000359082 TMEM200CA6NKL6 621 aa16.8■□□□□ 0.28
SHANK1-202ENST00000359082 ATP6V1G2-DDX39BF2Z307 99 aa16.8■□□□□ 0.28
SHANK1-202ENST00000359082 H0Y8X5 98 aa16.8■□□□□ 0.28
SHANK1-202ENST00000359082 ALOX5APP20292 161 aa16.8■□□□□ 0.28
SHANK1-202ENST00000359082 ALKBH6Q3KRA9 238 aa16.8■□□□□ 0.28
SHANK1-202ENST00000359082 OR1M1Q8NGA1 313 aa16.8■□□□□ 0.28
SHANK1-202ENST00000359082 APH1BQ8WW43 257 aa16.8■□□□□ 0.28
SHANK1-202ENST00000359082 ZNRF4Q8WWF5 429 aa16.8■□□□□ 0.28
SHANK1-202ENST00000359082 LURAP1Q96LR2 239 aa16.8■□□□□ 0.28
SHANK1-202ENST00000359082 TMEM43Q9BTV4 400 aa16.8■□□□□ 0.28
SHANK1-202ENST00000359082 SEMA4CQ9C0C4 833 aa16.8■□□□□ 0.28
SHANK1-202ENST00000359082 KCNG2Q9UJ96 466 aa16.8■□□□□ 0.28
SHANK1-202ENST00000359082 PPT2Q9UMR5 302 aa16.8■□□□□ 0.28
SHANK1-202ENST00000359082 LOC107986453A0A1B0GWG9 222 aa16.8■□□□□ 0.28
SHANK1-202ENST00000359082 SH2D1BO14796 132 aa16.8■□□□□ 0.28
SHANK1-202ENST00000359082 ANGPTL7O43827 346 aa16.8■□□□□ 0.28
SHANK1-202ENST00000359082 ACHEP22303 614 aa16.8■□□□□ 0.28
SHANK1-202ENST00000359082 CCR9P51686 369 aa16.8■□□□□ 0.28
SHANK1-202ENST00000359082 RPL7L1Q6DKI1 246 aaKnown RBP16.8■□□□□ 0.28
SHANK1-202ENST00000359082 PELI3Q8N2H9 469 aa16.8■□□□□ 0.28
SHANK1-202ENST00000359082 GPR12P47775 334 aa16.8■□□□□ 0.28
SHANK1-202ENST00000359082 SNRPGP62308 76 aaKnown RBP16.8■□□□□ 0.28
SHANK1-202ENST00000359082 TOX2Q96NM4 488 aa16.8■□□□□ 0.28
SHANK1-202ENST00000359082 ZNF346Q9UL40 294 aaKnown RBP16.8■□□□□ 0.28
SHANK1-202ENST00000359082 NPFFR2Q9Y5X5 522 aa16.8■□□□□ 0.28
SHANK1-202ENST00000359082 A0A096LPE4 126 aa16.79■□□□□ 0.28
SHANK1-202ENST00000359082 A0A1W2PPZ6 126 aa16.79■□□□□ 0.28
SHANK1-202ENST00000359082 CHEK1O14757 476 aa16.79■□□□□ 0.28
SHANK1-202ENST00000359082 RBP2P50120 134 aa16.79■□□□□ 0.28
SHANK1-202ENST00000359082 TFAP2EQ6VUC0 442 aa16.79■□□□□ 0.28
SHANK1-202ENST00000359082 MED30Q96HR3 178 aa16.79■□□□□ 0.28
SHANK1-202ENST00000359082 ZIC5Q96T25 663 aa16.79■□□□□ 0.28
SHANK1-202ENST00000359082 C6orf106Q9H6K1 298 aaPredicted RBP16.79■□□□□ 0.28
SHANK1-202ENST00000359082 A0A087WZY1 265 aa16.79■□□□□ 0.28
SHANK1-202ENST00000359082 CD27P26842 260 aa16.79■□□□□ 0.28
SHANK1-202ENST00000359082 FCER1GP30273 86 aa16.79■□□□□ 0.28
SHANK1-202ENST00000359082 IL10RAQ13651 578 aa16.79■□□□□ 0.28
SHANK1-202ENST00000359082 SLAMF6Q96DU3 332 aa16.79■□□□□ 0.28
SHANK1-202ENST00000359082 SOX7Q9BT81 388 aa16.79■□□□□ 0.28
SHANK1-202ENST00000359082 PTDSS2Q9BVG9 487 aa16.79■□□□□ 0.28
SHANK1-202ENST00000359082 TNFSF11O14788 317 aa16.79■□□□□ 0.28
SHANK1-202ENST00000359082 C2CD4CQ8TF44 421 aa16.79■□□□□ 0.28
SHANK1-202ENST00000359082 ISL2Q96A47 359 aa16.79■□□□□ 0.28
SHANK1-202ENST00000359082 BARX1Q9HBU1 254 aaPredicted RBP16.79■□□□□ 0.28
SHANK1-202ENST00000359082 B3GALT5Q9Y2C3 310 aa16.79■□□□□ 0.28
SHANK1-202ENST00000359082 MN1Q10571 1320 aaPredicted RBP16.79■□□□□ 0.28
SHANK1-202ENST00000359082 EIF4E2O60573 245 aaKnown RBP16.79■□□□□ 0.28
SHANK1-202ENST00000359082 OR2C1O95371 312 aa16.79■□□□□ 0.28
SHANK1-202ENST00000359082 SPANXN5Q5MJ07 72 aa16.79■□□□□ 0.28
SHANK1-202ENST00000359082 LHFPL2Q6ZUX7 228 aa16.79■□□□□ 0.28
SHANK1-202ENST00000359082 OR4F5Q8NH21 305 aa16.79■□□□□ 0.28
SHANK1-202ENST00000359082 OR4F4Q96R69 305 aa16.79■□□□□ 0.28
SHANK1-202ENST00000359082 SLC5A6Q9Y289 635 aa16.79■□□□□ 0.28
SHANK1-202ENST00000359082 ADAM10O14672 748 aa16.78■□□□□ 0.28
SHANK1-202ENST00000359082 MT-ND4LP03901 98 aa16.78■□□□□ 0.28
SHANK1-202ENST00000359082 KLKB1P03952 638 aa16.78■□□□□ 0.28
SHANK1-202ENST00000359082 GLI4P10075 376 aa16.78■□□□□ 0.28
SHANK1-202ENST00000359082 IAPPP10997 89 aa16.78■□□□□ 0.28
SHANK1-202ENST00000359082 B3GNT9Q6UX72 402 aa16.78■□□□□ 0.28
SHANK1-202ENST00000359082 ZNF620Q6ZNG0 422 aa16.78■□□□□ 0.28
SHANK1-202ENST00000359082 USP51Q70EK9 711 aa16.78■□□□□ 0.28
SHANK1-202ENST00000359082 TEAD3Q99594 435 aa16.78■□□□□ 0.28
SHANK1-202ENST00000359082 A0A1W2PNR3 127 aa16.78■□□□□ 0.28
SHANK1-202ENST00000359082 GLRA1P23415 457 aa16.78■□□□□ 0.28
SHANK1-202ENST00000359082 TAGLNQ01995 201 aaKnown RBP16.78■□□□□ 0.28
SHANK1-202ENST00000359082 TAF9Q16594 264 aa16.78■□□□□ 0.28
SHANK1-202ENST00000359082 DEFB108BQ8NET1 73 aa16.78■□□□□ 0.28
SHANK1-202ENST00000359082 OR5B3Q8NH48 314 aa16.78■□□□□ 0.28
SHANK1-202ENST00000359082 SLC37A2Q8TED4 501 aa16.78■□□□□ 0.28
SHANK1-202ENST00000359082 HMGN4O00479 90 aa16.78■□□□□ 0.28
SHANK1-202ENST00000359082 PPP1R2P9O14990 202 aa16.78■□□□□ 0.28
SHANK1-202ENST00000359082 H2AFB1P0C5Y9 115 aa16.78■□□□□ 0.28
SHANK1-202ENST00000359082 HIST1H1CP16403 213 aaKnown RBP16.78■□□□□ 0.28
SHANK1-202ENST00000359082 PPIAP62937 165 aaKnown RBP16.78■□□□□ 0.28
SHANK1-202ENST00000359082 CPEB3Q8NE35 698 aaKnown RBP16.78■□□□□ 0.28
SHANK1-202ENST00000359082 UQCC2Q9BRT2 126 aa16.78■□□□□ 0.28
SHANK1-202ENST00000359082 NKX6-2Q9C056 277 aaPredicted RBP16.78■□□□□ 0.28
SHANK1-202ENST00000359082 CHRNA9Q9UGM1 479 aa16.78■□□□□ 0.28
SHANK1-202ENST00000359082 RNF150Q9ULK6 438 aa16.78■□□□□ 0.28
SHANK1-202ENST00000359082 OR51B4Q9Y5P0 310 aa16.78■□□□□ 0.28
SHANK1-202ENST00000359082 ADPRHP54922 357 aa16.78■□□□□ 0.28
SHANK1-202ENST00000359082 OR13C8Q8NGS7 320 aa16.78■□□□□ 0.28
SHANK1-202ENST00000359082 OR52I2Q8NH67 350 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms