RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 SPRY4Q9C004 299 aa11.33□□□□□ -0.6
GGPS1-202ENST00000358966 ZFP64Q9NPA5 681 aa11.33□□□□□ -0.6
GGPS1-202ENST00000358966 MAB21L2Q9Y586 359 aa11.33□□□□□ -0.6
GGPS1-202ENST00000358966 RPP14O95059 124 aaKnown RBP11.33□□□□□ -0.6
GGPS1-202ENST00000358966 OR6A2O95222 327 aa11.33□□□□□ -0.6
GGPS1-202ENST00000358966 SSR4P51571 173 aa11.33□□□□□ -0.6
GGPS1-202ENST00000358966 POU3F1Q03052 451 aaPredicted RBP11.33□□□□□ -0.6
GGPS1-202ENST00000358966 HSF2Q03933 536 aa11.33□□□□□ -0.6
GGPS1-202ENST00000358966 TCF15Q12870 199 aa11.33□□□□□ -0.6
GGPS1-202ENST00000358966 TOMM20Q15388 145 aa11.33□□□□□ -0.6
GGPS1-202ENST00000358966 EXT1Q16394 746 aa11.33□□□□□ -0.6
GGPS1-202ENST00000358966 SLC35D2Q76EJ3 337 aa11.33□□□□□ -0.6
GGPS1-202ENST00000358966 DPY19L4Q7Z388 723 aa11.33□□□□□ -0.6
GGPS1-202ENST00000358966 MISPQ8IVT2 679 aa11.33□□□□□ -0.6
GGPS1-202ENST00000358966 ARIH2OSQ8N7S6 290 aa11.33□□□□□ -0.6
GGPS1-202ENST00000358966 EXD3Q8N9H8 876 aa11.33□□□□□ -0.6
GGPS1-202ENST00000358966 SFT2D1Q8WV19 159 aa11.33□□□□□ -0.6
GGPS1-202ENST00000358966 PELI1Q96FA3 418 aa11.33□□□□□ -0.6
GGPS1-202ENST00000358966 OR5B2Q96R09 309 aa11.33□□□□□ -0.6
GGPS1-202ENST00000358966 AMELYQ99218 206 aa11.33□□□□□ -0.6
GGPS1-202ENST00000358966 IGKV1D-43A0A0B4J1Z2 117 aa11.32□□□□□ -0.6
GGPS1-202ENST00000358966 ARGFXA6NJG6 315 aa11.32□□□□□ -0.6
GGPS1-202ENST00000358966 TEX46H3BTG2 121 aa11.32□□□□□ -0.6
GGPS1-202ENST00000358966 WRBO00258 174 aa11.32□□□□□ -0.6
GGPS1-202ENST00000358966 WNT11O96014 354 aa11.32□□□□□ -0.6
GGPS1-202ENST00000358966 IGHV2-70P01814 119 aa11.32□□□□□ -0.6
GGPS1-202ENST00000358966 HRGP04196 525 aa11.32□□□□□ -0.6
GGPS1-202ENST00000358966 IFNGR1P15260 489 aa11.32□□□□□ -0.6
GGPS1-202ENST00000358966 CTLA4P16410 223 aa11.32□□□□□ -0.6
GGPS1-202ENST00000358966 RFC3P40938 356 aa11.32□□□□□ -0.6
GGPS1-202ENST00000358966 RAB25P57735 213 aa11.32□□□□□ -0.6
GGPS1-202ENST00000358966 SRSF6Q13247 344 aaKnown RBP11.32□□□□□ -0.6
GGPS1-202ENST00000358966 ODF4Q2M2E3 257 aa11.32□□□□□ -0.6
GGPS1-202ENST00000358966 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.32□□□□□ -0.6
GGPS1-202ENST00000358966 NR2C2APQ86WQ0 139 aa11.32□□□□□ -0.6
GGPS1-202ENST00000358966 OR6N2Q8NGY6 317 aa11.32□□□□□ -0.6
GGPS1-202ENST00000358966 SNX33Q8WV41 574 aa11.32□□□□□ -0.6
GGPS1-202ENST00000358966 ST8SIA1Q92185 356 aa11.32□□□□□ -0.6
GGPS1-202ENST00000358966 LIN37Q96GY3 246 aaPredicted RBP11.32□□□□□ -0.6
GGPS1-202ENST00000358966 CCNL2Q96S94 520 aaPredicted RBP11.32□□□□□ -0.6
GGPS1-202ENST00000358966 MS4A18H0YCH9 400 aa11.32□□□□□ -0.6
GGPS1-202ENST00000358966 TGM6O95932 706 aa11.32□□□□□ -0.6
GGPS1-202ENST00000358966 HLA-DQA2P01906 255 aa11.32□□□□□ -0.6
GGPS1-202ENST00000358966 MT-ND5P03915 603 aa11.32□□□□□ -0.6
GGPS1-202ENST00000358966 OR8G3PP0DMU2 310 aa11.32□□□□□ -0.6
GGPS1-202ENST00000358966 TLE3Q04726 772 aa11.32□□□□□ -0.6
GGPS1-202ENST00000358966 ALKBH1Q13686 389 aaKnown RBP11.32□□□□□ -0.6
GGPS1-202ENST00000358966 MS4A18Q3C1V0 323 aa11.32□□□□□ -0.6
GGPS1-202ENST00000358966 KRT74Q7RTS7 529 aa11.32□□□□□ -0.6
GGPS1-202ENST00000358966 UPRTQ96BW1 309 aa11.32□□□□□ -0.6
GGPS1-202ENST00000358966 NXPE2Q96DL1 559 aa11.32□□□□□ -0.6
GGPS1-202ENST00000358966 MED18Q9BUE0 208 aa11.32□□□□□ -0.6
GGPS1-202ENST00000358966 OR51M1Q9H341 326 aa11.32□□□□□ -0.6
GGPS1-202ENST00000358966 TRIM36Q9NQ86 728 aa11.32□□□□□ -0.6
GGPS1-202ENST00000358966 HAO2Q9NYQ3 351 aa11.32□□□□□ -0.6
GGPS1-202ENST00000358966 NLKQ9UBE8 527 aa11.32□□□□□ -0.6
GGPS1-202ENST00000358966 PURGQ9UJV8 347 aaKnown RBP11.32□□□□□ -0.6
GGPS1-202ENST00000358966 IGHV3-15A0A0B4J1V0 119 aa11.31□□□□□ -0.6
GGPS1-202ENST00000358966 A8MXK9 166 aa11.31□□□□□ -0.6
GGPS1-202ENST00000358966 XKRYO14609 159 aa11.31□□□□□ -0.6
GGPS1-202ENST00000358966 SIGLEC5O15389 551 aa11.31□□□□□ -0.6
GGPS1-202ENST00000358966 SLC16A7O60669 478 aa11.31□□□□□ -0.6
GGPS1-202ENST00000358966 GLCEO94923 617 aa11.31□□□□□ -0.6
GGPS1-202ENST00000358966 RLN2P04090 185 aa11.31□□□□□ -0.6
GGPS1-202ENST00000358966 S100PP25815 95 aa11.31□□□□□ -0.6
GGPS1-202ENST00000358966 GPX4P36969 197 aaPredicted RBP11.31□□□□□ -0.6
GGPS1-202ENST00000358966 RIDAP52758 137 aaKnown RBP11.31□□□□□ -0.6
GGPS1-202ENST00000358966 MLF1P58340 268 aa11.31□□□□□ -0.6
GGPS1-202ENST00000358966 FGL1Q08830 312 aa11.31□□□□□ -0.6
GGPS1-202ENST00000358966 CHAF1BQ13112 559 aa11.31□□□□□ -0.6
GGPS1-202ENST00000358966 TMEM176BQ3YBM2 270 aaPredicted RBP11.31□□□□□ -0.6
GGPS1-202ENST00000358966 CYB5R2Q6BCY4 276 aa11.31□□□□□ -0.6
GGPS1-202ENST00000358966 FAM131AQ6UXB0 335 aa11.31□□□□□ -0.6
GGPS1-202ENST00000358966 BTN2A1Q7KYR7 527 aa11.31□□□□□ -0.6
GGPS1-202ENST00000358966 NEIL3Q8TAT5 605 aa11.31□□□□□ -0.6
GGPS1-202ENST00000358966 M1APQ8TC57 530 aa11.31□□□□□ -0.6
GGPS1-202ENST00000358966 ADAMTS14Q8WXS8 1223 aa11.31□□□□□ -0.6
GGPS1-202ENST00000358966 CXorf58Q96LI9 332 aa11.31□□□□□ -0.6
GGPS1-202ENST00000358966 KCTD7Q96MP8 289 aa11.31□□□□□ -0.6
GGPS1-202ENST00000358966 KCNG2Q9UJ96 466 aa11.31□□□□□ -0.6
GGPS1-202ENST00000358966 KCNK7Q9Y2U2 307 aa11.31□□□□□ -0.6
GGPS1-202ENST00000358966 CCDC187A0A096LP49 1063 aa11.31□□□□□ -0.6
GGPS1-202ENST00000358966 DXOO77932 396 aaKnown RBP11.31□□□□□ -0.6
GGPS1-202ENST00000358966 SMIM6P0DI80 62 aa11.31□□□□□ -0.6
GGPS1-202ENST00000358966 CASP6P55212 293 aa11.31□□□□□ -0.6
GGPS1-202ENST00000358966 RPL27P61353 136 aaKnown RBP11.31□□□□□ -0.6
GGPS1-202ENST00000358966 RPS15P62841 145 aaKnown RBP11.31□□□□□ -0.6
GGPS1-202ENST00000358966 LGALSLQ3ZCW2 172 aaPredicted RBP11.31□□□□□ -0.6
GGPS1-202ENST00000358966 BEST3Q8N1M1 668 aa11.31□□□□□ -0.6
GGPS1-202ENST00000358966 GHSRQ92847 366 aa11.31□□□□□ -0.6
GGPS1-202ENST00000358966 PGLYRP3Q96LB9 341 aa11.31□□□□□ -0.6
GGPS1-202ENST00000358966 JAM3Q9BX67 310 aa11.31□□□□□ -0.6
GGPS1-202ENST00000358966 NDRG3Q9UGV2 375 aa11.31□□□□□ -0.6
GGPS1-202ENST00000358966 KIF25Q9UIL4 384 aa11.31□□□□□ -0.6
GGPS1-202ENST00000358966 A0A075B6Q4 140 aa11.3□□□□□ -0.6
GGPS1-202ENST00000358966 TP53I11O14683 189 aa11.3□□□□□ -0.6
GGPS1-202ENST00000358966 CASKO14936 926 aa11.3□□□□□ -0.6
GGPS1-202ENST00000358966 DOK2O60496 412 aa11.3□□□□□ -0.6
GGPS1-202ENST00000358966 MT-ATP6P00846 226 aa11.3□□□□□ -0.6
GGPS1-202ENST00000358966 IGF2P01344 180 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms