RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 ST7LQ8TDW4 575 aa11.11□□□□□ -0.63
COL20A1-201ENST00000358894 SPACA5Q96QH8 159 aa11.11□□□□□ -0.63
COL20A1-201ENST00000358894 NUDT9Q9BW91 350 aa11.11□□□□□ -0.63
COL20A1-201ENST00000358894 FKRPQ9H9S5 495 aa11.11□□□□□ -0.63
COL20A1-201ENST00000358894 TMEM74BQ9NUR3 256 aa11.11□□□□□ -0.63
COL20A1-201ENST00000358894 LOC100289279A0A1B0GTE1 492 aa11.11□□□□□ -0.63
COL20A1-201ENST00000358894 CTSBP07858 339 aa11.11□□□□□ -0.63
COL20A1-201ENST00000358894 PPP3CBP16298 524 aa11.11□□□□□ -0.63
COL20A1-201ENST00000358894 RAB6AP20340 208 aa11.11□□□□□ -0.63
COL20A1-201ENST00000358894 SLC6A1P30531 599 aa11.11□□□□□ -0.63
COL20A1-201ENST00000358894 CXCL12P48061 93 aa11.11□□□□□ -0.63
COL20A1-201ENST00000358894 GUCA2AQ02747 115 aa11.11□□□□□ -0.63
COL20A1-201ENST00000358894 C17orf67Q0P5P2 114 aa11.11□□□□□ -0.63
COL20A1-201ENST00000358894 C1QL3Q5VWW1 255 aa11.11□□□□□ -0.63
COL20A1-201ENST00000358894 ADAM5Q6NVV9 412 aa11.11□□□□□ -0.63
COL20A1-201ENST00000358894 H3F3CQ6NXT2 135 aa11.11□□□□□ -0.63
COL20A1-201ENST00000358894 MAMSTRQ6ZN01 415 aa11.11□□□□□ -0.63
COL20A1-201ENST00000358894 HOXB13Q92826 284 aaPredicted RBP11.11□□□□□ -0.63
COL20A1-201ENST00000358894 VSTM2LQ96N03 204 aa11.11□□□□□ -0.63
COL20A1-201ENST00000358894 PHB2Q99623 299 aa11.11□□□□□ -0.63
COL20A1-201ENST00000358894 OR52A1Q9UKL2 312 aa11.11□□□□□ -0.63
COL20A1-201ENST00000358894 SF3B6Q9Y3B4 125 aaKnown RBP11.11□□□□□ -0.63
COL20A1-201ENST00000358894 THSD7BQ9C0I4 1608 aa11.11□□□□□ -0.63
COL20A1-201ENST00000358894 TCRBV16S1A1N1A0A5B0 115 aa11.1□□□□□ -0.63
COL20A1-201ENST00000358894 TMEM235A6NFC5 223 aa11.1□□□□□ -0.63
COL20A1-201ENST00000358894 H0YIG0 161 aa11.1□□□□□ -0.63
COL20A1-201ENST00000358894 ZIC2O95409 532 aaPredicted RBP11.1□□□□□ -0.63
COL20A1-201ENST00000358894 CALCBP10092 127 aa11.1□□□□□ -0.63
COL20A1-201ENST00000358894 GALP22466 123 aa11.1□□□□□ -0.63
COL20A1-201ENST00000358894 P2RX1P51575 399 aa11.1□□□□□ -0.63
COL20A1-201ENST00000358894 CSNK2A1P68400 391 aaPredicted RBP11.1□□□□□ -0.63
COL20A1-201ENST00000358894 PDZK1IP1Q13113 114 aa11.1□□□□□ -0.63
COL20A1-201ENST00000358894 LPAL2Q16609 132 aa11.1□□□□□ -0.63
COL20A1-201ENST00000358894 CHRDL2Q6WN34 429 aa11.1□□□□□ -0.63
COL20A1-201ENST00000358894 TRAPPC6BQ86SZ2 158 aa11.1□□□□□ -0.63
COL20A1-201ENST00000358894 CSNK2A3Q8NEV1 391 aa11.1□□□□□ -0.63
COL20A1-201ENST00000358894 PXT1Q8NFP0 134 aa11.1□□□□□ -0.63
COL20A1-201ENST00000358894 STT3BQ8TCJ2 826 aa11.1□□□□□ -0.63
COL20A1-201ENST00000358894 CHAC2Q8WUX2 184 aa11.1□□□□□ -0.63
COL20A1-201ENST00000358894 YIPF5Q969M3 257 aa11.1□□□□□ -0.63
COL20A1-201ENST00000358894 TAAR8Q969N4 342 aa11.1□□□□□ -0.63
COL20A1-201ENST00000358894 C8orf44Q96CB5 159 aa11.1□□□□□ -0.63
COL20A1-201ENST00000358894 LINC00052Q96N35 136 aa11.1□□□□□ -0.63
COL20A1-201ENST00000358894 MENTQ9BUN1 341 aa11.1□□□□□ -0.63
COL20A1-201ENST00000358894 ZNF160Q9HCG1 818 aa11.1□□□□□ -0.63
COL20A1-201ENST00000358894 PLEK2Q9NYT0 353 aa11.1□□□□□ -0.63
COL20A1-201ENST00000358894 SHISA3A0PJX4 238 aa11.1□□□□□ -0.63
COL20A1-201ENST00000358894 FBXO24O75426 580 aa11.1□□□□□ -0.63
COL20A1-201ENST00000358894 ZFAND5O76080 213 aa11.1□□□□□ -0.63
COL20A1-201ENST00000358894 SNU13P55769 128 aaKnown RBP11.1□□□□□ -0.63
COL20A1-201ENST00000358894 PRTGQ2VWP7 1150 aa11.1□□□□□ -0.63
COL20A1-201ENST00000358894 OR5H2Q8NGV7 314 aa11.1□□□□□ -0.63
COL20A1-201ENST00000358894 SCARB1Q8WTV0 552 aa11.1□□□□□ -0.63
COL20A1-201ENST00000358894 DCUN1D4Q92564 292 aa11.1□□□□□ -0.63
COL20A1-201ENST00000358894 C1orf198Q9H425 327 aa11.1□□□□□ -0.63
COL20A1-201ENST00000358894 LOC107986453A0A1B0GWG9 222 aa11.1□□□□□ -0.63
COL20A1-201ENST00000358894 D6RAR5 112 aa11.1□□□□□ -0.63
COL20A1-201ENST00000358894 TSTD3H0UI37 97 aa11.1□□□□□ -0.63
COL20A1-201ENST00000358894 TNFSF14O43557 240 aa11.1□□□□□ -0.63
COL20A1-201ENST00000358894 EIF4E2O60573 245 aaKnown RBP11.1□□□□□ -0.63
COL20A1-201ENST00000358894 IGHG1P01857 330 aa11.1□□□□□ -0.63
COL20A1-201ENST00000358894 POU2F2P09086 479 aa11.1□□□□□ -0.63
COL20A1-201ENST00000358894 PPT1P50897 306 aa11.1□□□□□ -0.63
COL20A1-201ENST00000358894 ST3GAL2Q16842 350 aa11.1□□□□□ -0.63
COL20A1-201ENST00000358894 PDSS1Q5T2R2 415 aa11.1□□□□□ -0.63
COL20A1-201ENST00000358894 ZNF585AQ6P3V2 769 aa11.1□□□□□ -0.63
COL20A1-201ENST00000358894 FAM57BQ71RH2 274 aa11.1□□□□□ -0.63
COL20A1-201ENST00000358894 SLC16A13Q7RTY0 426 aa11.1□□□□□ -0.63
COL20A1-201ENST00000358894 FAM122BQ7Z309 247 aa11.1□□□□□ -0.63
COL20A1-201ENST00000358894 ADGRG3Q86Y34 549 aa11.1□□□□□ -0.63
COL20A1-201ENST00000358894 ZNF679Q8IYX0 411 aa11.1□□□□□ -0.63
COL20A1-201ENST00000358894 OR51T1Q8NGJ9 327 aa11.1□□□□□ -0.63
COL20A1-201ENST00000358894 ZPLD1Q8TCW7 415 aa11.1□□□□□ -0.63
COL20A1-201ENST00000358894 PNPLA2Q96AD5 504 aa11.1□□□□□ -0.63
COL20A1-201ENST00000358894 LAT2Q9GZY6 243 aa11.1□□□□□ -0.63
COL20A1-201ENST00000358894 PTRH2Q9Y3E5 179 aaKnown RBP11.1□□□□□ -0.63
COL20A1-201ENST00000358894 RHBDD3Q9Y3P4 386 aa11.1□□□□□ -0.63
COL20A1-201ENST00000358894 FNDC1Q4ZHG4 1894 aaPredicted RBP11.1□□□□□ -0.63
COL20A1-201ENST00000358894 SDK2Q58EX2 2172 aa11.1□□□□□ -0.63
COL20A1-201ENST00000358894 PRSS37A4D1T9 235 aa11.09□□□□□ -0.63
COL20A1-201ENST00000358894 IL33O95760 270 aa11.09□□□□□ -0.63
COL20A1-201ENST00000358894 MT-ATP6P00846 226 aa11.09□□□□□ -0.63
COL20A1-201ENST00000358894 THY1P04216 161 aa11.09□□□□□ -0.63
COL20A1-201ENST00000358894 CD3DP04234 171 aa11.09□□□□□ -0.63
COL20A1-201ENST00000358894 ZP3P21754 424 aa11.09□□□□□ -0.63
COL20A1-201ENST00000358894 BDKRB2P30411 391 aa11.09□□□□□ -0.63
COL20A1-201ENST00000358894 ZNF84P51523 738 aa11.09□□□□□ -0.63
COL20A1-201ENST00000358894 AFF3P51826 1226 aaKnown RBP11.09□□□□□ -0.63
COL20A1-201ENST00000358894 C2orf76Q3KRA6 126 aa11.09□□□□□ -0.63
COL20A1-201ENST00000358894 PPP1R3BQ86XI6 285 aa11.09□□□□□ -0.63
COL20A1-201ENST00000358894 LINC00518Q8N0U6 118 aa11.09□□□□□ -0.63
COL20A1-201ENST00000358894 SORCS2Q96PQ0 1159 aa11.09□□□□□ -0.63
COL20A1-201ENST00000358894 PILRAQ9UKJ1 303 aa11.09□□□□□ -0.63
COL20A1-201ENST00000358894 PCOLCE2Q9UKZ9 415 aa11.09□□□□□ -0.63
COL20A1-201ENST00000358894 CACNA1EQ15878 2313 aa11.09□□□□□ -0.63
COL20A1-201ENST00000358894 RPS10-NUDT3A0A1W2PQS6 291 aa11.09□□□□□ -0.63
COL20A1-201ENST00000358894 IGKV1D-16P01601 117 aa11.09□□□□□ -0.63
COL20A1-201ENST00000358894 HOXC4P09017 264 aaPredicted RBP11.09□□□□□ -0.63
COL20A1-201ENST00000358894 CXCL3P19876 107 aa11.09□□□□□ -0.63
COL20A1-201ENST00000358894 RPS10P46783 165 aaKnown RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 128 ms