RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 DACH2Q96NX9 599 aa12.95□□□□□ -0.34
CCNE1-202ENST00000357943 PSMG3-AS1Q96PY0 264 aa12.95□□□□□ -0.34
CCNE1-202ENST00000357943 CNN2Q99439 309 aaKnown RBP12.95□□□□□ -0.34
CCNE1-202ENST00000357943 CCNB1IP1Q9NPC3 277 aa12.95□□□□□ -0.34
CCNE1-202ENST00000357943 GDF2Q9UK05 429 aaPredicted RBP12.95□□□□□ -0.34
CCNE1-202ENST00000357943 TIMM10BQ9Y5J6 103 aa12.95□□□□□ -0.34
CCNE1-202ENST00000357943 USP9YO00507 2555 aaPredicted RBP12.94□□□□□ -0.34
CCNE1-202ENST00000357943 ANKHD1Q8IWZ3 2542 aaKnown RBP12.94□□□□□ -0.34
CCNE1-202ENST00000357943 SNTNA6NMZ2 147 aa12.94□□□□□ -0.34
CCNE1-202ENST00000357943 PEX19P40855 299 aa12.94□□□□□ -0.34
CCNE1-202ENST00000357943 ZNF83P51522 516 aa12.94□□□□□ -0.34
CCNE1-202ENST00000357943 PCBD1P61457 104 aa12.94□□□□□ -0.34
CCNE1-202ENST00000357943 TMED1Q13445 227 aa12.94□□□□□ -0.34
CCNE1-202ENST00000357943 PABPC1L2AQ5JQF8 200 aa12.94□□□□□ -0.34
CCNE1-202ENST00000357943 MEX3BQ6ZN04 569 aaKnown RBP12.94□□□□□ -0.34
CCNE1-202ENST00000357943 CFAP77Q6ZQR2 320 aa12.94□□□□□ -0.34
CCNE1-202ENST00000357943 SLC16A9Q7RTY1 509 aa12.94□□□□□ -0.34
CCNE1-202ENST00000357943 DCXRQ7Z4W1 244 aa12.94□□□□□ -0.34
CCNE1-202ENST00000357943 ZNF584Q8IVC4 421 aa12.94□□□□□ -0.34
CCNE1-202ENST00000357943 MAP6Q96JE9 813 aa12.94□□□□□ -0.34
CCNE1-202ENST00000357943 RHNO1Q9BSD3 238 aa12.94□□□□□ -0.34
CCNE1-202ENST00000357943 OR2H1Q9GZK4 316 aa12.94□□□□□ -0.34
CCNE1-202ENST00000357943 WNT5BQ9H1J7 359 aa12.94□□□□□ -0.34
CCNE1-202ENST00000357943 CRYBG3Q68DQ2 2970 aa12.93□□□□□ -0.34
CCNE1-202ENST00000357943 DCHS2Q6V1P9 2916 aa12.93□□□□□ -0.34
CCNE1-202ENST00000357943 MAGEA13PA6NCF6 341 aa12.93□□□□□ -0.34
CCNE1-202ENST00000357943 XPNPEP2O43895 674 aa12.93□□□□□ -0.34
CCNE1-202ENST00000357943 TMCC2O75069 709 aa12.93□□□□□ -0.34
CCNE1-202ENST00000357943 RAB36O95755 333 aa12.93□□□□□ -0.34
CCNE1-202ENST00000357943 EPXP11678 715 aa12.93□□□□□ -0.34
CCNE1-202ENST00000357943 CBR1P16152 277 aa12.93□□□□□ -0.34
CCNE1-202ENST00000357943 ZNF14P17017 642 aaPredicted RBP12.93□□□□□ -0.34
CCNE1-202ENST00000357943 ATP6V1E1P36543 226 aa12.93□□□□□ -0.34
CCNE1-202ENST00000357943 ARR3P36575 388 aa12.93□□□□□ -0.34
CCNE1-202ENST00000357943 IDH3GP51553 393 aaPredicted RBP12.93□□□□□ -0.34
CCNE1-202ENST00000357943 CHN2P52757 468 aa12.93□□□□□ -0.34
CCNE1-202ENST00000357943 HIST1H3AP68431 136 aa12.93□□□□□ -0.34
CCNE1-202ENST00000357943 SCRN3Q0VDG4 424 aa12.93□□□□□ -0.34
CCNE1-202ENST00000357943 RAB39AQ14964 217 aa12.93□□□□□ -0.34
CCNE1-202ENST00000357943 CCDC92Q53HC0 331 aaPredicted RBP12.93□□□□□ -0.34
CCNE1-202ENST00000357943 HIST2H3PS2Q5TEC6 136 aa12.93□□□□□ -0.34
CCNE1-202ENST00000357943 ZNF774Q6NX45 483 aa12.93□□□□□ -0.34
CCNE1-202ENST00000357943 TMEM53Q6P2H8 277 aa12.93□□□□□ -0.34
CCNE1-202ENST00000357943 TMEM154Q6P9G4 183 aa12.93□□□□□ -0.34
CCNE1-202ENST00000357943 HIST2H3AQ71DI3 136 aa12.93□□□□□ -0.34
CCNE1-202ENST00000357943 DPPA2Q7Z7J5 298 aa12.93□□□□□ -0.34
CCNE1-202ENST00000357943 CDC20BQ86Y33 519 aa12.93□□□□□ -0.34
CCNE1-202ENST00000357943 RFLNBQ8N5W9 214 aa12.93□□□□□ -0.34
CCNE1-202ENST00000357943 CPEB3Q8NE35 698 aaKnown RBP12.93□□□□□ -0.34
CCNE1-202ENST00000357943 GJC3Q8NFK1 279 aa12.93□□□□□ -0.34
CCNE1-202ENST00000357943 BPIFB6Q8NFQ5 453 aa12.93□□□□□ -0.34
CCNE1-202ENST00000357943 OR2AJ1Q8NGZ0 328 aa12.93□□□□□ -0.34
CCNE1-202ENST00000357943 OTOSQ8NHW6 89 aa12.93□□□□□ -0.34
CCNE1-202ENST00000357943 AMELYQ99218 206 aa12.93□□□□□ -0.34
CCNE1-202ENST00000357943 WACQ9BTA9 647 aa12.93□□□□□ -0.34
CCNE1-202ENST00000357943 PLEK2Q9NYT0 353 aa12.93□□□□□ -0.34
CCNE1-202ENST00000357943 CRNNQ9UBG3 495 aaPredicted RBP12.93□□□□□ -0.34
CCNE1-202ENST00000357943 COPS3Q9UNS2 423 aa12.93□□□□□ -0.34
CCNE1-202ENST00000357943 KLHDC2Q9Y2U9 406 aa12.93□□□□□ -0.34
CCNE1-202ENST00000357943 RPL36Q9Y3U8 105 aaKnown RBP12.93□□□□□ -0.34
CCNE1-202ENST00000357943 ICE1Q9Y2F5 2266 aa12.93□□□□□ -0.34
CCNE1-202ENST00000357943 IGHV1-18A0A0C4DH31 117 aa12.92□□□□□ -0.34
CCNE1-202ENST00000357943 M0R1B8 84 aa12.92□□□□□ -0.34
CCNE1-202ENST00000357943 SGCEO43556 437 aa12.92□□□□□ -0.34
CCNE1-202ENST00000357943 IGLV1-44P01699 117 aa12.92□□□□□ -0.34
CCNE1-202ENST00000357943 LYNP07948 512 aa12.92□□□□□ -0.34
CCNE1-202ENST00000357943 COL8A1P27658 744 aa12.92□□□□□ -0.34
CCNE1-202ENST00000357943 POU4F2Q12837 409 aa12.92□□□□□ -0.34
CCNE1-202ENST00000357943 EIF2B1Q14232 305 aaKnown RBP12.92□□□□□ -0.34
CCNE1-202ENST00000357943 C6orf141Q5SZD1 244 aa12.92□□□□□ -0.34
CCNE1-202ENST00000357943 C1QTNF12Q5T7M4 302 aa12.92□□□□□ -0.34
CCNE1-202ENST00000357943 SP5Q6BEB4 398 aaPredicted RBP12.92□□□□□ -0.34
CCNE1-202ENST00000357943 KRT80Q6KB66 452 aa12.92□□□□□ -0.34
CCNE1-202ENST00000357943 VASH1Q7L8A9 365 aaPredicted RBP12.92□□□□□ -0.34
CCNE1-202ENST00000357943 SSX8Q7RTT4 187 aa12.92□□□□□ -0.34
CCNE1-202ENST00000357943 FAM169BQ8N8A8 192 aa12.92□□□□□ -0.34
CCNE1-202ENST00000357943 OR10S1Q8NGN2 331 aa12.92□□□□□ -0.34
CCNE1-202ENST00000357943 ST7LQ8TDW4 575 aa12.92□□□□□ -0.34
CCNE1-202ENST00000357943 LGALS12Q96DT0 336 aa12.92□□□□□ -0.34
CCNE1-202ENST00000357943 SPOCK3Q9BQ16 436 aa12.92□□□□□ -0.34
CCNE1-202ENST00000357943 C1orf198Q9H425 327 aa12.92□□□□□ -0.34
CCNE1-202ENST00000357943 PNRC2Q9NPJ4 139 aaKnown RBP12.92□□□□□ -0.34
CCNE1-202ENST00000357943 DOPEY2Q9Y3R5 2298 aa12.91□□□□□ -0.34
CCNE1-202ENST00000357943 J3QRE1 110 aa12.91□□□□□ -0.34
CCNE1-202ENST00000357943 CASKO14936 926 aa12.91□□□□□ -0.34
CCNE1-202ENST00000357943 SIAH2O43255 324 aa12.91□□□□□ -0.34
CCNE1-202ENST00000357943 DOK2O60496 412 aa12.91□□□□□ -0.34
CCNE1-202ENST00000357943 SERPINA5P05154 406 aa12.91□□□□□ -0.34
CCNE1-202ENST00000357943 CECR9P0C854 216 aa12.91□□□□□ -0.34
CCNE1-202ENST00000357943 CCL2P13500 99 aa12.91□□□□□ -0.34
CCNE1-202ENST00000357943 ALOX5APP20292 161 aa12.91□□□□□ -0.34
CCNE1-202ENST00000357943 CRYGSP22914 178 aa12.91□□□□□ -0.34
CCNE1-202ENST00000357943 APEX1P27695 318 aaKnown RBP12.91□□□□□ -0.34
CCNE1-202ENST00000357943 SLC15A1P46059 708 aa12.91□□□□□ -0.34
CCNE1-202ENST00000357943 SLC35F2Q8IXU6 374 aa12.91□□□□□ -0.34
CCNE1-202ENST00000357943 ALDH16A1Q8IZ83 802 aa12.91□□□□□ -0.34
CCNE1-202ENST00000357943 THEM6Q8WUY1 208 aa12.91□□□□□ -0.34
CCNE1-202ENST00000357943 TBX5Q99593 518 aa12.91□□□□□ -0.34
CCNE1-202ENST00000357943 ABHD6Q9BV23 337 aa12.91□□□□□ -0.34
CCNE1-202ENST00000357943 TTTY10Q9BZA0 68 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms