RNA–Protein interactions for RNA: ENST00000357412.2

LINC01560-201, Transcript of long intergenic non-protein coding RNA 1560, humanhuman

BASIC

Gene LINC01560, Length 1,253 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560-201ENST00000357412 COX5BP10606 129 aa8.63□□□□□ -1.03
LINC01560-201ENST00000357412 H2AFXP16104 143 aaPredicted RBP8.63□□□□□ -1.03
LINC01560-201ENST00000357412 EGR1P18146 543 aa8.63□□□□□ -1.03
LINC01560-201ENST00000357412 IFNA8P32881 189 aa8.63□□□□□ -1.03
LINC01560-201ENST00000357412 GUCA1AP43080 201 aaPredicted RBP8.63□□□□□ -1.03
LINC01560-201ENST00000357412 LIMS1P48059 325 aa8.63□□□□□ -1.03
LINC01560-201ENST00000357412 ARHGDIAP52565 204 aa8.63□□□□□ -1.03
LINC01560-201ENST00000357412 LCN2P80188 198 aa8.63□□□□□ -1.03
LINC01560-201ENST00000357412 TNFAIP6P98066 277 aaPredicted RBP8.63□□□□□ -1.03
LINC01560-201ENST00000357412 CDK5R2Q13319 367 aa8.63□□□□□ -1.03
LINC01560-201ENST00000357412 TRAM2Q15035 370 aa8.63□□□□□ -1.03
LINC01560-201ENST00000357412 ANKDD1AQ495B1 522 aa8.63□□□□□ -1.03
LINC01560-201ENST00000357412 MESTQ5EB52 335 aa8.63□□□□□ -1.03
LINC01560-201ENST00000357412 ZMAT1Q5H9K5 638 aa8.63□□□□□ -1.03
LINC01560-201ENST00000357412 TBPL2Q6SJ96 375 aa8.63□□□□□ -1.03
LINC01560-201ENST00000357412 Q6ZR03 302 aa8.63□□□□□ -1.03
LINC01560-201ENST00000357412 SLC15A3Q8IY34 581 aa8.63□□□□□ -1.03
LINC01560-201ENST00000357412 RNF113BQ8IZP6 322 aaKnown RBP8.63□□□□□ -1.03
LINC01560-201ENST00000357412 PCYOX1LQ8NBM8 494 aa8.63□□□□□ -1.03
LINC01560-201ENST00000357412 DEFB108BQ8NET1 73 aa8.63□□□□□ -1.03
LINC01560-201ENST00000357412 ACOT11Q8WXI4 607 aaPredicted RBP8.63□□□□□ -1.03
LINC01560-201ENST00000357412 DCLRE1CQ96SD1 692 aaKnown RBP8.63□□□□□ -1.03
LINC01560-201ENST00000357412 WACQ9BTA9 647 aa8.63□□□□□ -1.03
LINC01560-201ENST00000357412 FNDC11Q9BVV2 318 aa8.63□□□□□ -1.03
LINC01560-201ENST00000357412 SUCNR1Q9BXA5 334 aa8.63□□□□□ -1.03
LINC01560-201ENST00000357412 MMP26Q9NRE1 261 aa8.63□□□□□ -1.03
LINC01560-201ENST00000357412 FGFR1OP2Q9NVK5 253 aa8.63□□□□□ -1.03
LINC01560-201ENST00000357412 GID8Q9NWU2 228 aa8.63□□□□□ -1.03
LINC01560-201ENST00000357412 PURGQ9UJV8 347 aaKnown RBP8.63□□□□□ -1.03
LINC01560-201ENST00000357412 ADAM18Q9Y3Q7 739 aa8.63□□□□□ -1.03
LINC01560-201ENST00000357412 YLPM1P49750 1951 aaKnown RBP8.62□□□□□ -1.03
LINC01560-201ENST00000357412 TENM1Q9UKZ4 2725 aa8.62□□□□□ -1.03
LINC01560-201ENST00000357412 SPRY1O43609 319 aaPredicted RBP8.62□□□□□ -1.03
LINC01560-201ENST00000357412 TIMM8AO60220 97 aaPredicted RBP8.62□□□□□ -1.03
LINC01560-201ENST00000357412 FOXH1O75593 365 aa8.62□□□□□ -1.03
LINC01560-201ENST00000357412 IFNW1P05000 195 aa8.62□□□□□ -1.03
LINC01560-201ENST00000357412 CD14P08571 375 aa8.62□□□□□ -1.03
LINC01560-201ENST00000357412 SBK2P0C263 348 aa8.62□□□□□ -1.03
LINC01560-201ENST00000357412 TROVE2P10155 538 aaKnown RBP eCLIP8.62□□□□□ -1.03
LINC01560-201ENST00000357412 CTLA4P16410 223 aa8.62□□□□□ -1.03
LINC01560-201ENST00000357412 KITLGP21583 273 aa8.62□□□□□ -1.03
LINC01560-201ENST00000357412 TUBG1P23258 451 aa8.62□□□□□ -1.03
LINC01560-201ENST00000357412 SLC9A3P48764 834 aa8.62□□□□□ -1.03
LINC01560-201ENST00000357412 ERFP50548 548 aa8.62□□□□□ -1.03
LINC01560-201ENST00000357412 UBA52P62987 128 aaKnown RBP8.62□□□□□ -1.03
LINC01560-201ENST00000357412 SCRN3Q0VDG4 424 aa8.62□□□□□ -1.03
LINC01560-201ENST00000357412 OTPQ5XKR4 325 aa8.62□□□□□ -1.03
LINC01560-201ENST00000357412 ARL9Q6T311 187 aa8.62□□□□□ -1.03
LINC01560-201ENST00000357412 ZNF730Q6ZMV8 503 aa8.62□□□□□ -1.03
LINC01560-201ENST00000357412 TMPRSS11FQ6ZWK6 438 aa8.62□□□□□ -1.03
LINC01560-201ENST00000357412 MBOAT2Q6ZWT7 520 aa8.62□□□□□ -1.03
LINC01560-201ENST00000357412 CBLL1Q75N03 491 aa8.62□□□□□ -1.03
LINC01560-201ENST00000357412 VASH1Q7L8A9 365 aaPredicted RBP8.62□□□□□ -1.03
LINC01560-201ENST00000357412 FAM122BQ7Z309 247 aa8.62□□□□□ -1.03
LINC01560-201ENST00000357412 TSEN54Q7Z6J9 526 aaKnown RBP8.62□□□□□ -1.03
LINC01560-201ENST00000357412 ZER1Q7Z7L7 766 aa8.62□□□□□ -1.03
LINC01560-201ENST00000357412 BPIFB2Q8N4F0 458 aa8.62□□□□□ -1.03
LINC01560-201ENST00000357412 ZNF283Q8N7M2 679 aa8.62□□□□□ -1.03
LINC01560-201ENST00000357412 C3orf56Q8N813 242 aa8.62□□□□□ -1.03
LINC01560-201ENST00000357412 C22orf15Q8WYQ4 148 aa8.62□□□□□ -1.03
LINC01560-201ENST00000357412 LZICQ8WZA0 190 aa8.62□□□□□ -1.03
LINC01560-201ENST00000357412 RCN3Q96D15 328 aa8.62□□□□□ -1.03
LINC01560-201ENST00000357412 CMBLQ96DG6 245 aa8.62□□□□□ -1.03
LINC01560-201ENST00000357412 SAMD8Q96LT4 415 aa8.62□□□□□ -1.03
LINC01560-201ENST00000357412 Q96M85 177 aa8.62□□□□□ -1.03
LINC01560-201ENST00000357412 SIGLEC11Q96RL6 698 aa8.62□□□□□ -1.03
LINC01560-201ENST00000357412 PATZ1Q9HBE1 687 aaKnown RBP8.62□□□□□ -1.03
LINC01560-201ENST00000357412 TUBG2Q9NRH3 451 aa8.62□□□□□ -1.03
LINC01560-201ENST00000357412 POLR3KQ9Y2Y1 108 aaPredicted RBP8.62□□□□□ -1.03
LINC01560-201ENST00000357412 STARD10Q9Y365 291 aa8.62□□□□□ -1.03
LINC01560-201ENST00000357412 CAPN7Q9Y6W3 813 aa8.62□□□□□ -1.03
LINC01560-201ENST00000357412 TEX13CA0A0J9YWL9 993 aa8.61□□□□□ -1.03
LINC01560-201ENST00000357412 PRSS37A4D1T9 235 aa8.61□□□□□ -1.03
LINC01560-201ENST00000357412 TRAPPC2LH3BP13 241 aa8.61□□□□□ -1.03
LINC01560-201ENST00000357412 CXCR6O00574 342 aa8.61□□□□□ -1.03
LINC01560-201ENST00000357412 IMPA2O14732 288 aa8.61□□□□□ -1.03
LINC01560-201ENST00000357412 SGCEO43556 437 aa8.61□□□□□ -1.03
LINC01560-201ENST00000357412 AHCYL1O43865 530 aa8.61□□□□□ -1.03
LINC01560-201ENST00000357412 PTP4A3O75365 173 aa8.61□□□□□ -1.03
LINC01560-201ENST00000357412 GSTM3P21266 225 aa8.61□□□□□ -1.03
LINC01560-201ENST00000357412 FPR2P25090 351 aa8.61□□□□□ -1.03
LINC01560-201ENST00000357412 RPL4P36578 427 aaKnown RBP8.61□□□□□ -1.03
LINC01560-201ENST00000357412 GPR4P46093 362 aa8.61□□□□□ -1.03
LINC01560-201ENST00000357412 HTR5AP47898 357 aa8.61□□□□□ -1.03
LINC01560-201ENST00000357412 SLC6A9P48067 706 aa8.61□□□□□ -1.03
LINC01560-201ENST00000357412 SEC61A1P61619 476 aaKnown RBP8.61□□□□□ -1.03
LINC01560-201ENST00000357412 LIPEQ05469 1076 aa8.61□□□□□ -1.03
LINC01560-201ENST00000357412 ZNF154Q13106 437 aa8.61□□□□□ -1.03
LINC01560-201ENST00000357412 ZMYND11Q15326 602 aa8.61□□□□□ -1.03
LINC01560-201ENST00000357412 TMEM155Q4W5P6 130 aa8.61□□□□□ -1.03
LINC01560-201ENST00000357412 IFI44LQ53G44 452 aa8.61□□□□□ -1.03
LINC01560-201ENST00000357412 AWAT1Q58HT5 328 aa8.61□□□□□ -1.03
LINC01560-201ENST00000357412 KLF17Q5JT82 389 aaPredicted RBP8.61□□□□□ -1.03
LINC01560-201ENST00000357412 LRRC28Q86X40 367 aaPredicted RBP8.61□□□□□ -1.03
LINC01560-201ENST00000357412 TREML1Q86YW5 311 aa8.61□□□□□ -1.03
LINC01560-201ENST00000357412 SPICQ8N5J4 248 aa8.61□□□□□ -1.03
LINC01560-201ENST00000357412 POU5F2Q8N7G0 328 aa8.61□□□□□ -1.03
LINC01560-201ENST00000357412 NPEPL1Q8NDH3 523 aa8.61□□□□□ -1.03
LINC01560-201ENST00000357412 OR2Z1Q8NG97 314 aa8.61□□□□□ -1.03
LINC01560-201ENST00000357412 SGMS2Q8NHU3 365 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms