RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 SLC41A2Q96JW4 573 aa9.13□□□□□ -0.95
PTPRA-203ENST00000356147 CRB3Q9BUF7 120 aa9.13□□□□□ -0.95
PTPRA-203ENST00000356147 MRI1Q9BV20 369 aa9.13□□□□□ -0.95
PTPRA-203ENST00000356147 HRH4Q9H3N8 390 aa9.13□□□□□ -0.95
PTPRA-203ENST00000356147 DUX4Q9UBX2 424 aa9.13□□□□□ -0.95
PTPRA-203ENST00000356147 MKL2Q9ULH7 1088 aa9.13□□□□□ -0.95
PTPRA-203ENST00000356147 HIF3AQ9Y2N7 669 aa9.13□□□□□ -0.95
PTPRA-203ENST00000356147 WIPF3A6NGB9 483 aa9.12□□□□□ -0.95
PTPRA-203ENST00000356147 CRYBA1P05813 215 aa9.12□□□□□ -0.95
PTPRA-203ENST00000356147 ERCC1P07992 297 aaPredicted RBP9.12□□□□□ -0.95
PTPRA-203ENST00000356147 EIF1AXP47813 144 aaKnown RBP9.12□□□□□ -0.95
PTPRA-203ENST00000356147 B2MP61769 119 aa9.12□□□□□ -0.95
PTPRA-203ENST00000356147 PAPD4Q6PIY7 484 aaKnown RBP9.12□□□□□ -0.95
PTPRA-203ENST00000356147 ACOT7LQ6ZUV0 252 aa9.12□□□□□ -0.95
PTPRA-203ENST00000356147 FAM160A2Q8N612 972 aaPredicted RBP9.12□□□□□ -0.95
PTPRA-203ENST00000356147 LRRC75AQ8NAA5 344 aa9.12□□□□□ -0.95
PTPRA-203ENST00000356147 OR4D6Q8NGJ1 314 aa9.12□□□□□ -0.95
PTPRA-203ENST00000356147 MRGPRFQ96AM1 343 aa9.12□□□□□ -0.95
PTPRA-203ENST00000356147 ADOQ96SZ5 270 aa9.12□□□□□ -0.95
PTPRA-203ENST00000356147 SCPEP1Q9HB40 452 aa9.12□□□□□ -0.95
PTPRA-203ENST00000356147 UPB1Q9UBR1 384 aa9.12□□□□□ -0.95
PTPRA-203ENST00000356147 ATPIF1Q9UII2 106 aa9.12□□□□□ -0.95
PTPRA-203ENST00000356147 EMC9Q9Y3B6 208 aa9.12□□□□□ -0.95
PTPRA-203ENST00000356147 CSAG2Q9Y5P2 127 aa9.12□□□□□ -0.95
PTPRA-203ENST00000356147 RP1P56715 2156 aa9.12□□□□□ -0.95
PTPRA-203ENST00000356147 NPIPB9F8W1W9 429 aa9.12□□□□□ -0.95
PTPRA-203ENST00000356147 ZNF208O43345 1280 aa9.12□□□□□ -0.95
PTPRA-203ENST00000356147 RENP00797 406 aa9.12□□□□□ -0.95
PTPRA-203ENST00000356147 NAT2P11245 290 aa9.12□□□□□ -0.95
PTPRA-203ENST00000356147 CD96P40200 585 aa9.12□□□□□ -0.95
PTPRA-203ENST00000356147 CBX5P45973 191 aa9.12□□□□□ -0.95
PTPRA-203ENST00000356147 ID4P47928 161 aa9.12□□□□□ -0.95
PTPRA-203ENST00000356147 RAB13P51153 203 aa9.12□□□□□ -0.95
PTPRA-203ENST00000356147 HTRA3P83110 453 aa9.12□□□□□ -0.95
PTPRA-203ENST00000356147 SLC17A1Q14916 467 aa9.12□□□□□ -0.95
PTPRA-203ENST00000356147 INPP5JQ15735 1006 aaPredicted RBP9.12□□□□□ -0.95
PTPRA-203ENST00000356147 ZNF141Q15928 474 aa9.12□□□□□ -0.95
PTPRA-203ENST00000356147 RNF144BQ7Z419 303 aa9.12□□□□□ -0.95
PTPRA-203ENST00000356147 ZNF584Q8IVC4 421 aa9.12□□□□□ -0.95
PTPRA-203ENST00000356147 LILRB1Q8NHL6 650 aaPredicted RBP9.12□□□□□ -0.95
PTPRA-203ENST00000356147 NUBPLQ8TB37 319 aa9.12□□□□□ -0.95
PTPRA-203ENST00000356147 ASB5Q8WWX0 329 aa9.12□□□□□ -0.95
PTPRA-203ENST00000356147 RRNAD1Q96FB5 475 aaKnown RBP9.12□□□□□ -0.95
PTPRA-203ENST00000356147 PARP12Q9H0J9 701 aaKnown RBP9.12□□□□□ -0.95
PTPRA-203ENST00000356147 C1orf198Q9H425 327 aa9.12□□□□□ -0.95
PTPRA-203ENST00000356147 A0A1B0GTI1 187 aa9.11□□□□□ -0.95
PTPRA-203ENST00000356147 MSGN1A6NI15 193 aa9.11□□□□□ -0.95
PTPRA-203ENST00000356147 OR2F2O95006 317 aa9.11□□□□□ -0.95
PTPRA-203ENST00000356147 PMP2P02689 132 aa9.11□□□□□ -0.95
PTPRA-203ENST00000356147 PNLIPRP2P54317 469 aa9.11□□□□□ -0.95
PTPRA-203ENST00000356147 BIKQ13323 160 aa9.11□□□□□ -0.95
PTPRA-203ENST00000356147 OR2F1Q13607 317 aa9.11□□□□□ -0.95
PTPRA-203ENST00000356147 TGIF1Q15583 401 aa9.11□□□□□ -0.95
PTPRA-203ENST00000356147 RNASE10Q5GAN6 216 aaKnown RBP9.11□□□□□ -0.95
PTPRA-203ENST00000356147 SLC16A13Q7RTY0 426 aa9.11□□□□□ -0.95
PTPRA-203ENST00000356147 TRAPPC6BQ86SZ2 158 aa9.11□□□□□ -0.95
PTPRA-203ENST00000356147 FJX1Q86VR8 437 aa9.11□□□□□ -0.95
PTPRA-203ENST00000356147 ARMC10Q8N2F6 343 aa9.11□□□□□ -0.95
PTPRA-203ENST00000356147 SVBPQ8N300 66 aa9.11□□□□□ -0.95
PTPRA-203ENST00000356147 OR2I1PQ8NGU4 316 aa9.11□□□□□ -0.95
PTPRA-203ENST00000356147 OTOSQ8NHW6 89 aa9.11□□□□□ -0.95
PTPRA-203ENST00000356147 BAHD1Q8TBE0 780 aaPredicted RBP9.11□□□□□ -0.95
PTPRA-203ENST00000356147 DGAT2Q96PD7 388 aa9.11□□□□□ -0.95
PTPRA-203ENST00000356147 GAL3ST4Q96RP7 486 aa9.11□□□□□ -0.95
PTPRA-203ENST00000356147 OR10A5Q9H207 317 aa9.11□□□□□ -0.95
PTPRA-203ENST00000356147 PIGMQ9H3S5 423 aa9.11□□□□□ -0.95
PTPRA-203ENST00000356147 FANCFQ9NPI8 374 aa9.11□□□□□ -0.95
PTPRA-203ENST00000356147 ZNF629Q9UEG4 869 aaPredicted RBP9.11□□□□□ -0.95
PTPRA-203ENST00000356147 EFCAB7A8K855 629 aa9.11□□□□□ -0.95
PTPRA-203ENST00000356147 METTL12A8MUP2 240 aa9.11□□□□□ -0.95
PTPRA-203ENST00000356147 ADAP1O75689 374 aa9.11□□□□□ -0.95
PTPRA-203ENST00000356147 CD8AP01732 235 aa9.11□□□□□ -0.95
PTPRA-203ENST00000356147 CTLA4P16410 223 aa9.11□□□□□ -0.95
PTPRA-203ENST00000356147 GNB3P16520 340 aa9.11□□□□□ -0.95
PTPRA-203ENST00000356147 HRH1P35367 487 aa9.11□□□□□ -0.95
PTPRA-203ENST00000356147 SERPINF1P36955 418 aa9.11□□□□□ -0.95
PTPRA-203ENST00000356147 SLC25A1P53007 311 aa9.11□□□□□ -0.95
PTPRA-203ENST00000356147 SLC9A3R2Q15599 337 aa9.11□□□□□ -0.95
PTPRA-203ENST00000356147 ZNF776Q68DI1 518 aaPredicted RBP9.11□□□□□ -0.95
PTPRA-203ENST00000356147 TMEM184AQ6ZMB5 413 aa9.11□□□□□ -0.95
PTPRA-203ENST00000356147 ATG4DQ86TL0 474 aaPredicted RBP9.11□□□□□ -0.95
PTPRA-203ENST00000356147 OR4A4PQ8NGN8 299 aa9.11□□□□□ -0.95
PTPRA-203ENST00000356147 NANPQ8TBE9 248 aa9.11□□□□□ -0.95
PTPRA-203ENST00000356147 RXFP4Q8TDU9 374 aa9.11□□□□□ -0.95
PTPRA-203ENST00000356147 LRFN5Q96NI6 719 aa9.11□□□□□ -0.95
PTPRA-203ENST00000356147 TOX2Q96NM4 488 aa9.11□□□□□ -0.95
PTPRA-203ENST00000356147 LMF2Q9BU23 707 aaKnown RBP9.11□□□□□ -0.95
PTPRA-203ENST00000356147 SEMA6CQ9H3T2 930 aa9.11□□□□□ -0.95
PTPRA-203ENST00000356147 MRPL22Q9NWU5 206 aaKnown RBP9.11□□□□□ -0.95
PTPRA-203ENST00000356147 DHCR7Q9UBM7 475 aaKnown RBP9.11□□□□□ -0.95
PTPRA-203ENST00000356147 EPHA6Q9UF33 1036 aa9.11□□□□□ -0.95
PTPRA-203ENST00000356147 XKRYO14609 159 aa9.11□□□□□ -0.95
PTPRA-203ENST00000356147 ADH1BP00325 375 aa9.11□□□□□ -0.95
PTPRA-203ENST00000356147 HNRNPA1P09651 372 aaKnown RBP eCLIP9.11□□□□□ -0.95
PTPRA-203ENST00000356147 COL9A1P20849 921 aa9.11□□□□□ -0.95
PTPRA-203ENST00000356147 DNASE1L1P49184 302 aa9.11□□□□□ -0.95
PTPRA-203ENST00000356147 RAB38P57729 211 aa9.11□□□□□ -0.95
PTPRA-203ENST00000356147 GPR85P60893 370 aa9.11□□□□□ -0.95
PTPRA-203ENST00000356147 RASGEF1BQ0VAM2 473 aa9.11□□□□□ -0.95
PTPRA-203ENST00000356147 ELOCQ15369 112 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms