RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 PRDX4Q13162 271 aa15.84■□□□□ 0.13
COL27A1-201ENST00000356083 IAH1Q2TAA2 248 aaPredicted RBP15.84■□□□□ 0.13
COL27A1-201ENST00000356083 ZNF750Q32MQ0 723 aa15.84■□□□□ 0.13
COL27A1-201ENST00000356083 SPNS3Q6ZMD2 512 aa15.84■□□□□ 0.13
COL27A1-201ENST00000356083 AMIGO3Q86WK7 504 aa15.84■□□□□ 0.13
COL27A1-201ENST00000356083 SLC22A24Q8N4F4 322 aa15.84■□□□□ 0.13
COL27A1-201ENST00000356083 RDH5Q92781 318 aa15.84■□□□□ 0.13
COL27A1-201ENST00000356083 VRTNQ9H8Y1 702 aa15.84■□□□□ 0.13
COL27A1-201ENST00000356083 ZNF71Q9NQZ8 489 aaPredicted RBP15.84■□□□□ 0.13
COL27A1-201ENST00000356083 A0A1W2PRD5 423 aa15.84■□□□□ 0.13
COL27A1-201ENST00000356083 A0A1W2PRF3 423 aa15.84■□□□□ 0.13
COL27A1-201ENST00000356083 A0A1W2PRM7 423 aa15.84■□□□□ 0.13
COL27A1-201ENST00000356083 CIDEAO60543 219 aa15.84■□□□□ 0.13
COL27A1-201ENST00000356083 KRTDAPP60985 99 aa15.84■□□□□ 0.13
COL27A1-201ENST00000356083 BTNL3Q6UXE8 466 aa15.84■□□□□ 0.13
COL27A1-201ENST00000356083 BLNKQ8WV28 456 aa15.84■□□□□ 0.13
COL27A1-201ENST00000356083 RPUSD4Q96CM3 377 aaKnown RBP15.84■□□□□ 0.13
COL27A1-201ENST00000356083 ZNF300Q96RE9 604 aaPredicted RBP15.84■□□□□ 0.13
COL27A1-201ENST00000356083 PRR14Q9BWN1 585 aa15.84■□□□□ 0.13
COL27A1-201ENST00000356083 ZNF320A2RRD8 509 aa15.84■□□□□ 0.13
COL27A1-201ENST00000356083 LRIT2A6NDA9 550 aa15.84■□□□□ 0.13
COL27A1-201ENST00000356083 PPP5D1E7EU14 171 aa15.84■□□□□ 0.13
COL27A1-201ENST00000356083 SELENOFO60613 162 aa15.84■□□□□ 0.13
COL27A1-201ENST00000356083 PIGAP37287 484 aa15.84■□□□□ 0.13
COL27A1-201ENST00000356083 TNFRSF17Q02223 184 aa15.84■□□□□ 0.13
COL27A1-201ENST00000356083 EXT1Q16394 746 aa15.84■□□□□ 0.13
COL27A1-201ENST00000356083 LCN15Q6UWW0 184 aa15.84■□□□□ 0.13
COL27A1-201ENST00000356083 PRSS45Q7RTY3 260 aa15.84■□□□□ 0.13
COL27A1-201ENST00000356083 SPACA5Q96QH8 159 aa15.84■□□□□ 0.13
COL27A1-201ENST00000356083 ACP2P11117 423 aa15.84■□□□□ 0.13
COL27A1-201ENST00000356083 TMEM123Q8N131 208 aa15.84■□□□□ 0.13
COL27A1-201ENST00000356083 CD200R1Q8TD46 325 aa15.84■□□□□ 0.13
COL27A1-201ENST00000356083 ZNF716A6NP11 495 aa15.84■□□□□ 0.13
COL27A1-201ENST00000356083 FAM157AC9JC47 383 aa15.84■□□□□ 0.13
COL27A1-201ENST00000356083 OPRD1P41143 372 aa15.84■□□□□ 0.13
COL27A1-201ENST00000356083 CLN3Q13286 438 aa15.84■□□□□ 0.13
COL27A1-201ENST00000356083 RNFT1Q5M7Z0 435 aa15.84■□□□□ 0.13
COL27A1-201ENST00000356083 KCNRGQ8N5I3 272 aa15.84■□□□□ 0.13
COL27A1-201ENST00000356083 OR13C5Q8NGS8 318 aa15.84■□□□□ 0.13
COL27A1-201ENST00000356083 ESRP2Q9H6T0 727 aaKnown RBP15.84■□□□□ 0.13
COL27A1-201ENST00000356083 DCCP43146 1447 aa15.84■□□□□ 0.13
COL27A1-201ENST00000356083 FIGNL2A6NMB9 653 aa15.84■□□□□ 0.13
COL27A1-201ENST00000356083 ABCD3P28288 659 aa15.84■□□□□ 0.13
COL27A1-201ENST00000356083 SLC5A12Q1EHB4 618 aa15.84■□□□□ 0.13
COL27A1-201ENST00000356083 LACC1Q8IV20 430 aa15.84■□□□□ 0.13
COL27A1-201ENST00000356083 LGI3Q8N145 548 aa15.84■□□□□ 0.13
COL27A1-201ENST00000356083 OR2Z1Q8NG97 314 aa15.84■□□□□ 0.13
COL27A1-201ENST00000356083 TMEM163Q8TC26 289 aa15.84■□□□□ 0.13
COL27A1-201ENST00000356083 G3V3Q6 166 aa15.83■□□□□ 0.13
COL27A1-201ENST00000356083 GABARAPL2P60520 117 aa15.83■□□□□ 0.13
COL27A1-201ENST00000356083 RPS23P62266 143 aaKnown RBP15.83■□□□□ 0.13
COL27A1-201ENST00000356083 ZNF141Q15928 474 aa15.83■□□□□ 0.13
COL27A1-201ENST00000356083 ENTHD1Q8IYW4 607 aa15.83■□□□□ 0.13
COL27A1-201ENST00000356083 TREM2Q9NZC2 230 aa15.83■□□□□ 0.13
COL27A1-201ENST00000356083 SLX4Q8IY92 1834 aa15.83■□□□□ 0.13
COL27A1-201ENST00000356083 CCSO14618 274 aa15.83■□□□□ 0.13
COL27A1-201ENST00000356083 TAS2R60P59551 318 aa15.83■□□□□ 0.13
COL27A1-201ENST00000356083 DRAM2Q6UX65 266 aa15.83■□□□□ 0.13
COL27A1-201ENST00000356083 MDGA2Q7Z553 956 aa15.83■□□□□ 0.13
COL27A1-201ENST00000356083 LRRTM3Q86VH5 581 aa15.83■□□□□ 0.13
COL27A1-201ENST00000356083 SLCO5A1Q9H2Y9 848 aa15.83■□□□□ 0.13
COL27A1-201ENST00000356083 SEMA4GQ9NTN9 838 aa15.83■□□□□ 0.13
COL27A1-201ENST00000356083 MYF6P23409 242 aa15.83■□□□□ 0.12
COL27A1-201ENST00000356083 NTNG1Q9Y2I2 539 aa15.83■□□□□ 0.12
COL27A1-201ENST00000356083 TAF1P21675 1872 aa15.83■□□□□ 0.12
COL27A1-201ENST00000356083 CACNG3O60359 315 aa15.83■□□□□ 0.12
COL27A1-201ENST00000356083 STEAP1BQ6NZ63 245 aa15.83■□□□□ 0.12
COL27A1-201ENST00000356083 C1orf87Q8N0U7 546 aa15.83■□□□□ 0.12
COL27A1-201ENST00000356083 HAVCR2Q8TDQ0 301 aa15.83■□□□□ 0.12
COL27A1-201ENST00000356083 AAMDCQ9H7C9 122 aa15.83■□□□□ 0.12
COL27A1-201ENST00000356083 UFC1Q9Y3C8 167 aa15.83■□□□□ 0.12
COL27A1-201ENST00000356083 SERINC4A6NH21 518 aa15.83■□□□□ 0.12
COL27A1-201ENST00000356083 ARHGEF39Q8N4T4 335 aa15.83■□□□□ 0.12
COL27A1-201ENST00000356083 OR10R2Q8NGX6 335 aa15.83■□□□□ 0.12
COL27A1-201ENST00000356083 SLC7A6Q92536 515 aa15.83■□□□□ 0.12
COL27A1-201ENST00000356083 GHSRQ92847 366 aa15.83■□□□□ 0.12
COL27A1-201ENST00000356083 TUBB1Q9H4B7 451 aa15.83■□□□□ 0.12
COL27A1-201ENST00000356083 TMEM9BQ9NQ34 198 aa15.83■□□□□ 0.12
COL27A1-201ENST00000356083 ARHGAP33O14559 1287 aa15.83■□□□□ 0.12
COL27A1-201ENST00000356083 B3GALT4O96024 378 aa15.83■□□□□ 0.12
COL27A1-201ENST00000356083 MT-ND4LP03901 98 aa15.83■□□□□ 0.12
COL27A1-201ENST00000356083 GIPRP48546 466 aa15.83■□□□□ 0.12
COL27A1-201ENST00000356083 ZNF133P52736 654 aaPredicted RBP15.83■□□□□ 0.12
COL27A1-201ENST00000356083 RFPL4BQ6ZWI9 263 aa15.83■□□□□ 0.12
COL27A1-201ENST00000356083 KCNG3Q8TAE7 436 aa15.83■□□□□ 0.12
COL27A1-201ENST00000356083 ZNF480Q8WV37 535 aa15.83■□□□□ 0.12
COL27A1-201ENST00000356083 RAB40BQ12829 278 aa15.82■□□□□ 0.12
COL27A1-201ENST00000356083 ZNF789Q5FWF6 425 aa15.82■□□□□ 0.12
COL27A1-201ENST00000356083 TFAP2EQ6VUC0 442 aa15.82■□□□□ 0.12
COL27A1-201ENST00000356083 GASTP01350 101 aa15.82■□□□□ 0.12
COL27A1-201ENST00000356083 OPRM1P35372 400 aa15.82■□□□□ 0.12
COL27A1-201ENST00000356083 OXA1LQ15070 435 aa15.82■□□□□ 0.12
COL27A1-201ENST00000356083 CMTM4Q8IZR5 234 aa15.82■□□□□ 0.12
COL27A1-201ENST00000356083 CAMTA1Q9Y6Y1 1673 aa15.82■□□□□ 0.12
COL27A1-201ENST00000356083 HCRTR1O43613 425 aa15.82■□□□□ 0.12
COL27A1-201ENST00000356083 CNR1P21554 472 aa15.82■□□□□ 0.12
COL27A1-201ENST00000356083 ERVFC1-1P60608 527 aa15.82■□□□□ 0.12
COL27A1-201ENST00000356083 RTP5Q14D33 572 aa15.82■□□□□ 0.12
COL27A1-201ENST00000356083 COA3Q9Y2R0 106 aaPredicted RBP15.82■□□□□ 0.12
COL27A1-201ENST00000356083 ATP6V1G2-DDX39BF2Z307 99 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms