RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 NOX3Q9HBY0 568 aa13.52□□□□□ -0.25
TRIM13-201ENST00000356017 PLEK2Q9NYT0 353 aa13.52□□□□□ -0.25
TRIM13-201ENST00000356017 FAM221AA4D161 298 aa13.51□□□□□ -0.25
TRIM13-201ENST00000356017 CCDC182A6NF36 153 aa13.51□□□□□ -0.25
TRIM13-201ENST00000356017 DPRXA6NFQ7 191 aa13.51□□□□□ -0.25
TRIM13-201ENST00000356017 CD3EP07766 207 aa13.51□□□□□ -0.25
TRIM13-201ENST00000356017 SPARCP09486 303 aa13.51□□□□□ -0.25
TRIM13-201ENST00000356017 CECR9P0C854 216 aa13.51□□□□□ -0.25
TRIM13-201ENST00000356017 GABRB1P18505 474 aa13.51□□□□□ -0.25
TRIM13-201ENST00000356017 HIST1H3AP68431 136 aa13.51□□□□□ -0.25
TRIM13-201ENST00000356017 POU4F2Q12837 409 aa13.51□□□□□ -0.25
TRIM13-201ENST00000356017 GGTLC2Q14390 218 aa13.51□□□□□ -0.25
TRIM13-201ENST00000356017 RAB39AQ14964 217 aa13.51□□□□□ -0.25
TRIM13-201ENST00000356017 HIST2H3PS2Q5TEC6 136 aa13.51□□□□□ -0.25
TRIM13-201ENST00000356017 OTPQ5XKR4 325 aa13.51□□□□□ -0.25
TRIM13-201ENST00000356017 SLC18B1Q6NT16 456 aa13.51□□□□□ -0.25
TRIM13-201ENST00000356017 LYPD4Q6UWN0 246 aa13.51□□□□□ -0.25
TRIM13-201ENST00000356017 HIST2H3AQ71DI3 136 aa13.51□□□□□ -0.25
TRIM13-201ENST00000356017 OR1J2Q8NGS2 313 aa13.51□□□□□ -0.25
TRIM13-201ENST00000356017 OR6N2Q8NGY6 317 aa13.51□□□□□ -0.25
TRIM13-201ENST00000356017 MARVELD3Q96A59 401 aa13.51□□□□□ -0.25
TRIM13-201ENST00000356017 DNAJC27Q9NZQ0 273 aa13.51□□□□□ -0.25
TRIM13-201ENST00000356017 SPTAN1Q13813 2472 aaKnown RBP13.51□□□□□ -0.25
TRIM13-201ENST00000356017 ANKHD1Q8IWZ3 2542 aaKnown RBP13.51□□□□□ -0.25
TRIM13-201ENST00000356017 ABCD4O14678 606 aa13.5□□□□□ -0.25
TRIM13-201ENST00000356017 RER1O15258 196 aa13.5□□□□□ -0.25
TRIM13-201ENST00000356017 SIAH2O43255 324 aa13.5□□□□□ -0.25
TRIM13-201ENST00000356017 DOK2O60496 412 aa13.5□□□□□ -0.25
TRIM13-201ENST00000356017 ENTPD6O75354 484 aa13.5□□□□□ -0.25
TRIM13-201ENST00000356017 CLIC3O95833 236 aa13.5□□□□□ -0.25
TRIM13-201ENST00000356017 COX5BP10606 129 aa13.5□□□□□ -0.25
TRIM13-201ENST00000356017 STOMP27105 288 aa13.5□□□□□ -0.25
TRIM13-201ENST00000356017 SSTR2P30874 369 aa13.5□□□□□ -0.25
TRIM13-201ENST00000356017 APLNRP35414 380 aa13.5□□□□□ -0.25
TRIM13-201ENST00000356017 NAAAQ02083 359 aa13.5□□□□□ -0.25
TRIM13-201ENST00000356017 B3GLCTQ6Y288 498 aa13.5□□□□□ -0.25
TRIM13-201ENST00000356017 SLC16A9Q7RTY1 509 aa13.5□□□□□ -0.25
TRIM13-201ENST00000356017 DPY19L4Q7Z388 723 aa13.5□□□□□ -0.25
TRIM13-201ENST00000356017 ZNF584Q8IVC4 421 aa13.5□□□□□ -0.25
TRIM13-201ENST00000356017 LINC00346Q8IVM7 164 aa13.5□□□□□ -0.25
TRIM13-201ENST00000356017 ZNF454Q8N9F8 522 aa13.5□□□□□ -0.25
TRIM13-201ENST00000356017 SLC30A7Q8NEW0 376 aa13.5□□□□□ -0.25
TRIM13-201ENST00000356017 CNN2Q99439 309 aaKnown RBP13.5□□□□□ -0.25
TRIM13-201ENST00000356017 YIPF3Q9GZM5 350 aa13.5□□□□□ -0.25
TRIM13-201ENST00000356017 HDHD2Q9H0R4 259 aa13.5□□□□□ -0.25
TRIM13-201ENST00000356017 WNT5BQ9H1J7 359 aa13.5□□□□□ -0.25
TRIM13-201ENST00000356017 ATPIF1Q9UII2 106 aa13.5□□□□□ -0.25
TRIM13-201ENST00000356017 GDF2Q9UK05 429 aaPredicted RBP13.5□□□□□ -0.25
TRIM13-201ENST00000356017 RNF115Q9Y4L5 304 aa13.5□□□□□ -0.25
TRIM13-201ENST00000356017 CTAG2O75638 210 aa13.5□□□□□ -0.25
TRIM13-201ENST00000356017 CELA3BP08861 270 aa13.5□□□□□ -0.25
TRIM13-201ENST00000356017 ATP6V1E1P36543 226 aa13.5□□□□□ -0.25
TRIM13-201ENST00000356017 ISL1P61371 349 aa13.5□□□□□ -0.25
TRIM13-201ENST00000356017 ECH1Q13011 328 aa13.5□□□□□ -0.25
TRIM13-201ENST00000356017 MAD2L1BPQ15013 274 aaPredicted RBP13.5□□□□□ -0.25
TRIM13-201ENST00000356017 RAB35Q15286 201 aa13.5□□□□□ -0.25
TRIM13-201ENST00000356017 TBC1D28Q2M2D7 210 aa13.5□□□□□ -0.25
TRIM13-201ENST00000356017 ELFN2Q5R3F8 820 aa13.5□□□□□ -0.25
TRIM13-201ENST00000356017 C6orf52Q5T4I8 152 aa13.5□□□□□ -0.25
TRIM13-201ENST00000356017 ZNF774Q6NX45 483 aa13.5□□□□□ -0.25
TRIM13-201ENST00000356017 CORO6Q6QEF8 472 aa13.5□□□□□ -0.25
TRIM13-201ENST00000356017 USP51Q70EK9 711 aa13.5□□□□□ -0.25
TRIM13-201ENST00000356017 VASH1Q7L8A9 365 aaPredicted RBP13.5□□□□□ -0.25
TRIM13-201ENST00000356017 DCXRQ7Z4W1 244 aa13.5□□□□□ -0.25
TRIM13-201ENST00000356017 PIAS4Q8N2W9 510 aaPredicted RBP13.5□□□□□ -0.25
TRIM13-201ENST00000356017 CPEB3Q8NE35 698 aaKnown RBP13.5□□□□□ -0.25
TRIM13-201ENST00000356017 AKR7LQ8NHP1 331 aa13.5□□□□□ -0.25
TRIM13-201ENST00000356017 OTOSQ8NHW6 89 aa13.5□□□□□ -0.25
TRIM13-201ENST00000356017 MS4A3Q96HJ5 214 aa13.5□□□□□ -0.25
TRIM13-201ENST00000356017 MNTQ99583 582 aa13.5□□□□□ -0.25
TRIM13-201ENST00000356017 TMEM14AQ9Y6G1 99 aa13.5□□□□□ -0.25
TRIM13-201ENST00000356017 SELENOFO60613 162 aa13.49□□□□□ -0.25
TRIM13-201ENST00000356017 APEX1P27695 318 aaKnown RBP13.49□□□□□ -0.25
TRIM13-201ENST00000356017 NAA10P41227 235 aaPredicted RBP13.49□□□□□ -0.25
TRIM13-201ENST00000356017 RPS27P42677 84 aaKnown RBP13.49□□□□□ -0.25
TRIM13-201ENST00000356017 MTNR1AP48039 350 aa13.49□□□□□ -0.25
TRIM13-201ENST00000356017 GDI2P50395 445 aaKnown RBP13.49□□□□□ -0.25
TRIM13-201ENST00000356017 CCDC92Q53HC0 331 aaPredicted RBP13.49□□□□□ -0.25
TRIM13-201ENST00000356017 SLC22A25Q6T423 547 aa13.49□□□□□ -0.25
TRIM13-201ENST00000356017 RHOUQ7L0Q8 258 aa13.49□□□□□ -0.25
TRIM13-201ENST00000356017 THAP5Q7Z6K1 395 aa13.49□□□□□ -0.25
TRIM13-201ENST00000356017 ZNF295-AS1Q8N0V1 137 aa13.49□□□□□ -0.25
TRIM13-201ENST00000356017 OR1F12Q8NHA8 337 aa13.49□□□□□ -0.25
TRIM13-201ENST00000356017 IPCEF1Q8WWN9 437 aaPredicted RBP13.49□□□□□ -0.25
TRIM13-201ENST00000356017 TMEM204Q9BSN7 226 aa13.49□□□□□ -0.25
TRIM13-201ENST00000356017 LAMP5Q9UJQ1 280 aa13.49□□□□□ -0.25
TRIM13-201ENST00000356017 RPL36Q9Y3U8 105 aaKnown RBP13.49□□□□□ -0.25
TRIM13-201ENST00000356017 OR6C6A6NF89 314 aa13.48□□□□□ -0.25
TRIM13-201ENST00000356017 SYNGR3O43761 229 aa13.48□□□□□ -0.25
TRIM13-201ENST00000356017 LYNP07948 512 aa13.48□□□□□ -0.25
TRIM13-201ENST00000356017 GNAO1P09471 354 aa13.48□□□□□ -0.25
TRIM13-201ENST00000356017 SBK2P0C263 348 aa13.48□□□□□ -0.25
TRIM13-201ENST00000356017 LOXP28300 417 aaPredicted RBP13.48□□□□□ -0.25
TRIM13-201ENST00000356017 HTR5AP47898 357 aa13.48□□□□□ -0.25
TRIM13-201ENST00000356017 NUDT6P53370 316 aa13.48□□□□□ -0.25
TRIM13-201ENST00000356017 GALK2Q01415 458 aa13.48□□□□□ -0.25
TRIM13-201ENST00000356017 TLE4Q04727 773 aa13.48□□□□□ -0.25
TRIM13-201ENST00000356017 EIF2B1Q14232 305 aaKnown RBP13.48□□□□□ -0.25
TRIM13-201ENST00000356017 TMEM154Q6P9G4 183 aa13.48□□□□□ -0.25
TRIM13-201ENST00000356017 ARL9Q6T311 187 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms