RNA–Protein interactions for RNA: ENST00000355633.5

HOXA1-202, Transcript of homeobox A1, humanhuman

TSL 1 (best) BASIC

Gene HOXA1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-202ENST00000355633 ZNF416Q9BWM5 594 aa12.01□□□□□ -0.49
HOXA1-202ENST00000355633 GPR35Q9HC97 309 aa12.01□□□□□ -0.49
HOXA1-202ENST00000355633 SLC7A10Q9NS82 523 aa12.01□□□□□ -0.49
HOXA1-202ENST00000355633 CENPMQ9NSP4 180 aa12.01□□□□□ -0.49
HOXA1-202ENST00000355633 TUBD1Q9UJT1 453 aa12.01□□□□□ -0.49
HOXA1-202ENST00000355633 CD8B2A6NJW9 211 aa12.01□□□□□ -0.49
HOXA1-202ENST00000355633 AHRRA9YTQ3 701 aa12.01□□□□□ -0.49
HOXA1-202ENST00000355633 ZNF254O75437 659 aa12.01□□□□□ -0.49
HOXA1-202ENST00000355633 H2BFMP0C1H6 154 aa12.01□□□□□ -0.49
HOXA1-202ENST00000355633 CD8BP10966 210 aa12.01□□□□□ -0.49
HOXA1-202ENST00000355633 SH3BGRP55822 239 aaPredicted RBP12.01□□□□□ -0.49
HOXA1-202ENST00000355633 TUBA1BP68363 451 aa12.01□□□□□ -0.49
HOXA1-202ENST00000355633 ENDOGQ14249 297 aaKnown RBP12.01□□□□□ -0.49
HOXA1-202ENST00000355633 KRTCAP3Q53RY4 240 aa12.01□□□□□ -0.49
HOXA1-202ENST00000355633 DEGS2Q6QHC5 323 aa12.01□□□□□ -0.49
HOXA1-202ENST00000355633 CFAP77Q6ZQR2 320 aa12.01□□□□□ -0.49
HOXA1-202ENST00000355633 TUBA1AQ71U36 451 aa12.01□□□□□ -0.49
HOXA1-202ENST00000355633 NUFIP2Q7Z417 695 aaKnown RBP12.01□□□□□ -0.49
HOXA1-202ENST00000355633 ZNF100Q8IYN0 542 aa12.01□□□□□ -0.49
HOXA1-202ENST00000355633 LRRC18Q8N456 261 aa12.01□□□□□ -0.49
HOXA1-202ENST00000355633 MS4A15Q8N5U1 240 aa12.01□□□□□ -0.49
HOXA1-202ENST00000355633 DCLRE1CQ96SD1 692 aaKnown RBP12.01□□□□□ -0.49
HOXA1-202ENST00000355633 FOXB1Q99853 325 aa12.01□□□□□ -0.49
HOXA1-202ENST00000355633 GLRX2Q9NS18 164 aa12.01□□□□□ -0.49
HOXA1-202ENST00000355633 TMEM38BQ9NVV0 291 aa12.01□□□□□ -0.49
HOXA1-202ENST00000355633 MGAQ8IWI9 3026 aa12.01□□□□□ -0.49
HOXA1-202ENST00000355633 GPRIN2O60269 458 aa12□□□□□ -0.49
HOXA1-202ENST00000355633 OPRL1P41146 370 aa12□□□□□ -0.49
HOXA1-202ENST00000355633 INSL4Q14641 139 aa12□□□□□ -0.49
HOXA1-202ENST00000355633 ZNF585AQ6P3V2 769 aa12□□□□□ -0.49
HOXA1-202ENST00000355633 TMEM91Q6ZNR0 172 aa12□□□□□ -0.49
HOXA1-202ENST00000355633 FGD2Q7Z6J4 655 aa12□□□□□ -0.49
HOXA1-202ENST00000355633 HIST2H2ABQ8IUE6 130 aaPredicted RBP12□□□□□ -0.49
HOXA1-202ENST00000355633 Q8NA96 180 aa12□□□□□ -0.49
HOXA1-202ENST00000355633 OR2G2Q8NGZ5 317 aa12□□□□□ -0.49
HOXA1-202ENST00000355633 ABHD4Q8TB40 342 aa12□□□□□ -0.49
HOXA1-202ENST00000355633 KCTD7Q96MP8 289 aa12□□□□□ -0.49
HOXA1-202ENST00000355633 PDCD1LG2Q9BQ51 273 aa12□□□□□ -0.49
HOXA1-202ENST00000355633 KCNN2Q9H2S1 579 aa12□□□□□ -0.49
HOXA1-202ENST00000355633 SIAEQ9HAT2 523 aa12□□□□□ -0.49
HOXA1-202ENST00000355633 FRRS1LQ9P0K9 344 aa12□□□□□ -0.49
HOXA1-202ENST00000355633 UPB1Q9UBR1 384 aa12□□□□□ -0.49
HOXA1-202ENST00000355633 CACNA1CQ13936 2221 aa12□□□□□ -0.49
HOXA1-202ENST00000355633 LAMA5O15230 3695 aa12□□□□□ -0.49
HOXA1-202ENST00000355633 MED19A0JLT2 244 aaPredicted RBP11.99□□□□□ -0.49
HOXA1-202ENST00000355633 ZNF878C9JN71 531 aa11.99□□□□□ -0.49
HOXA1-202ENST00000355633 ZNF587BE7ETH6 402 aa11.99□□□□□ -0.49
HOXA1-202ENST00000355633 RER1O15258 196 aa11.99□□□□□ -0.49
HOXA1-202ENST00000355633 SS18L1O75177 396 aaPredicted RBP11.99□□□□□ -0.49
HOXA1-202ENST00000355633 SERPINA3P01011 423 aa11.99□□□□□ -0.49
HOXA1-202ENST00000355633 LSAMPQ13449 338 aa11.99□□□□□ -0.49
HOXA1-202ENST00000355633 DGUOKQ16854 277 aa11.99□□□□□ -0.49
HOXA1-202ENST00000355633 ACSF3Q4G176 576 aaPredicted RBP11.99□□□□□ -0.49
HOXA1-202ENST00000355633 FAM27BQ5VT28 67 aa11.99□□□□□ -0.49
HOXA1-202ENST00000355633 ZNF324BQ6AW86 544 aaPredicted RBP11.99□□□□□ -0.49
HOXA1-202ENST00000355633 FDX2Q6P4F2 183 aa11.99□□□□□ -0.49
HOXA1-202ENST00000355633 OR10S1Q8NGN2 331 aa11.99□□□□□ -0.49
HOXA1-202ENST00000355633 WNT2BQ93097 391 aa11.99□□□□□ -0.49
HOXA1-202ENST00000355633 C12orf49Q9H741 205 aa11.99□□□□□ -0.49
HOXA1-202ENST00000355633 GALNT8Q9NY28 637 aa11.99□□□□□ -0.49
HOXA1-202ENST00000355633 FBXL3Q9UKT7 428 aa11.99□□□□□ -0.49
HOXA1-202ENST00000355633 RPL36A-HNRNPH2H7BZ11 118 aa11.99□□□□□ -0.49
HOXA1-202ENST00000355633 ZFPL1O95159 310 aa11.99□□□□□ -0.49
HOXA1-202ENST00000355633 B4GALT1P15291 398 aa11.99□□□□□ -0.49
HOXA1-202ENST00000355633 SF3B4Q15427 424 aaKnown RBP eCLIP11.99□□□□□ -0.49
HOXA1-202ENST00000355633 STK11Q15831 433 aa11.99□□□□□ -0.49
HOXA1-202ENST00000355633 ZNF544Q6NX49 715 aa11.99□□□□□ -0.49
HOXA1-202ENST00000355633 RHOUQ7L0Q8 258 aa11.99□□□□□ -0.49
HOXA1-202ENST00000355633 UBE2J2Q8N2K1 259 aa11.99□□□□□ -0.49
HOXA1-202ENST00000355633 CISD2Q8N5K1 135 aaKnown RBP11.99□□□□□ -0.49
HOXA1-202ENST00000355633 GJC3Q8NFK1 279 aa11.99□□□□□ -0.49
HOXA1-202ENST00000355633 OR13C5Q8NGS8 318 aa11.99□□□□□ -0.49
HOXA1-202ENST00000355633 OR5AK2Q8NH90 309 aa11.99□□□□□ -0.49
HOXA1-202ENST00000355633 ZNF281Q9Y2X9 895 aa11.99□□□□□ -0.49
HOXA1-202ENST00000355633 MED12LQ86YW9 2145 aa11.99□□□□□ -0.49
HOXA1-202ENST00000355633 DVL2O14641 736 aa11.98□□□□□ -0.49
HOXA1-202ENST00000355633 SC5DO75845 299 aa11.98□□□□□ -0.49
HOXA1-202ENST00000355633 PNPP00491 289 aa11.98□□□□□ -0.49
HOXA1-202ENST00000355633 TAF13Q15543 124 aa11.98□□□□□ -0.49
HOXA1-202ENST00000355633 ACSM3Q53FZ2 586 aa11.98□□□□□ -0.49
HOXA1-202ENST00000355633 YIF1BQ5BJH7 314 aa11.98□□□□□ -0.49
HOXA1-202ENST00000355633 WDR38Q5JTN6 314 aa11.98□□□□□ -0.49
HOXA1-202ENST00000355633 KLHL24Q6TFL4 600 aa11.98□□□□□ -0.49
HOXA1-202ENST00000355633 GCNT2Q8N0V5 402 aa11.98□□□□□ -0.49
HOXA1-202ENST00000355633 PRSS35Q8N3Z0 413 aa11.98□□□□□ -0.49
HOXA1-202ENST00000355633 SLC22A24Q8N4F4 322 aa11.98□□□□□ -0.49
HOXA1-202ENST00000355633 C4orf45Q96LM5 186 aa11.98□□□□□ -0.49
HOXA1-202ENST00000355633 COMMD4Q9H0A8 199 aa11.98□□□□□ -0.49
HOXA1-202ENST00000355633 PNRC2Q9NPJ4 139 aaKnown RBP11.98□□□□□ -0.49
HOXA1-202ENST00000355633 GTF2A1LQ9UNN4 478 aa11.98□□□□□ -0.49
HOXA1-202ENST00000355633 R4GMQ9 66 aa11.98□□□□□ -0.49
HOXA1-202ENST00000355633 ARHGAP21Q5T5U3 1957 aa11.98□□□□□ -0.49
HOXA1-202ENST00000355633 ANKRD11Q6UB99 2663 aaPredicted RBP11.98□□□□□ -0.49
HOXA1-202ENST00000355633 TMEM212A6NML5 194 aa11.98□□□□□ -0.49
HOXA1-202ENST00000355633 OR4C45A6NMZ5 311 aa11.98□□□□□ -0.49
HOXA1-202ENST00000355633 LOC110117498-PIK3R3F6TDL0 507 aa11.98□□□□□ -0.49
HOXA1-202ENST00000355633 CDRT1O95170 752 aa11.98□□□□□ -0.49
HOXA1-202ENST00000355633 TPOP07202 933 aa11.98□□□□□ -0.49
HOXA1-202ENST00000355633 CST2P09228 141 aa11.98□□□□□ -0.49
HOXA1-202ENST00000355633 GABRA1P14867 456 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms