RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 SPI1P17947 270 aa4.92□□□□□ -1.62
CD47-201ENST00000355354 RND3P61587 244 aa4.92□□□□□ -1.62
CD47-201ENST00000355354 RPL18Q07020 188 aaKnown RBP4.92□□□□□ -1.62
CD47-201ENST00000355354 MLLT11Q13015 90 aaPredicted RBP4.92□□□□□ -1.62
CD47-201ENST00000355354 MSMPQ1L6U9 139 aa4.92□□□□□ -1.62
CD47-201ENST00000355354 AADACL3Q5VUY0 350 aa4.92□□□□□ -1.62
CD47-201ENST00000355354 DPPA4Q7L190 304 aa4.92□□□□□ -1.62
CD47-201ENST00000355354 C16orf62Q7Z3J2 963 aa4.92□□□□□ -1.62
CD47-201ENST00000355354 GPR137Q96N19 417 aa4.92□□□□□ -1.62
CD47-201ENST00000355354 CHST11Q9NPF2 352 aa4.92□□□□□ -1.62
CD47-201ENST00000355354 AURKAIP1Q9NWT8 199 aaPredicted RBP4.92□□□□□ -1.62
CD47-201ENST00000355354 DCAF16Q9NXF7 216 aa4.92□□□□□ -1.62
CD47-201ENST00000355354 HS3ST3B1Q9Y662 390 aa4.92□□□□□ -1.62
CD47-201ENST00000355354 A0A1B0GVI7 797 aa4.92□□□□□ -1.62
CD47-201ENST00000355354 RNH1P13489 461 aaKnown RBP4.92□□□□□ -1.62
CD47-201ENST00000355354 RPA2P15927 270 aa4.92□□□□□ -1.62
CD47-201ENST00000355354 HSF1Q00613 529 aa4.92□□□□□ -1.62
CD47-201ENST00000355354 DEFB133Q30KQ1 61 aa4.92□□□□□ -1.62
CD47-201ENST00000355354 ELFN2Q5R3F8 820 aa4.92□□□□□ -1.62
CD47-201ENST00000355354 DMRTA1Q5VZB9 504 aa4.92□□□□□ -1.62
CD47-201ENST00000355354 TMEM163Q8TC26 289 aa4.92□□□□□ -1.62
CD47-201ENST00000355354 ST8SIA4Q92187 359 aa4.92□□□□□ -1.62
CD47-201ENST00000355354 TSPAN32Q96QS1 320 aa4.92□□□□□ -1.62
CD47-201ENST00000355354 MAGIXQ9H6Y5 334 aa4.92□□□□□ -1.62
CD47-201ENST00000355354 UCK1Q9HA47 277 aa4.92□□□□□ -1.62
CD47-201ENST00000355354 B8ZZF3 427 aa4.91□□□□□ -1.62
CD47-201ENST00000355354 EIF1AYO14602 144 aaKnown RBP4.91□□□□□ -1.62
CD47-201ENST00000355354 SAGP10523 405 aaPredicted RBP4.91□□□□□ -1.62
CD47-201ENST00000355354 PSMA1P25786 263 aaKnown RBP4.91□□□□□ -1.62
CD47-201ENST00000355354 DLSTP36957 453 aa4.91□□□□□ -1.62
CD47-201ENST00000355354 STARP49675 285 aa4.91□□□□□ -1.62
CD47-201ENST00000355354 P2RX1P51575 399 aa4.91□□□□□ -1.62
CD47-201ENST00000355354 SNRPGP62308 76 aaKnown RBP4.91□□□□□ -1.62
CD47-201ENST00000355354 CDK5R1Q15078 307 aa4.91□□□□□ -1.62
CD47-201ENST00000355354 TSC22D1Q15714 1073 aa4.91□□□□□ -1.62
CD47-201ENST00000355354 ELAVL1Q15717 326 aaKnown RBP4.91□□□□□ -1.62
CD47-201ENST00000355354 ALKBH6Q3KRA9 238 aa4.91□□□□□ -1.62
CD47-201ENST00000355354 SPANXN2Q5MJ10 180 aa4.91□□□□□ -1.62
CD47-201ENST00000355354 SLC35F3Q8IY50 421 aa4.91□□□□□ -1.62
CD47-201ENST00000355354 VWA5B2Q8N398 1253 aa4.91□□□□□ -1.62
CD47-201ENST00000355354 ASB5Q8WWX0 329 aa4.91□□□□□ -1.62
CD47-201ENST00000355354 NUS1Q96E22 293 aa4.91□□□□□ -1.62
CD47-201ENST00000355354 LYZL4Q96KX0 146 aa4.91□□□□□ -1.62
CD47-201ENST00000355354 ZNF385AQ96PM9 386 aaKnown RBP4.91□□□□□ -1.62
CD47-201ENST00000355354 SLC17A9Q9BYT1 436 aa4.91□□□□□ -1.62
CD47-201ENST00000355354 TUBA4BQ9H853 241 aa4.91□□□□□ -1.62
CD47-201ENST00000355354 A0A0B4J2E0 115 aa4.91□□□□□ -1.62
CD47-201ENST00000355354 A0A1B0GX12 115 aa4.91□□□□□ -1.62
CD47-201ENST00000355354 PLPP2O43688 288 aa4.91□□□□□ -1.62
CD47-201ENST00000355354 ACAA1P09110 424 aaPredicted RBP4.91□□□□□ -1.62
CD47-201ENST00000355354 UGT2B7P16662 529 aa4.91□□□□□ -1.62
CD47-201ENST00000355354 ITGA2P17301 1181 aa4.91□□□□□ -1.62
CD47-201ENST00000355354 NPBWR2P48146 333 aa4.91□□□□□ -1.62
CD47-201ENST00000355354 GPR85P60893 370 aa4.91□□□□□ -1.62
CD47-201ENST00000355354 KRTAP21-3Q3LHN1 58 aa4.91□□□□□ -1.62
CD47-201ENST00000355354 TCTE1Q5JU00 501 aa4.91□□□□□ -1.62
CD47-201ENST00000355354 ZNF555Q8NEP9 628 aa4.91□□□□□ -1.62
CD47-201ENST00000355354 TRAPPC4Q9Y296 219 aa4.91□□□□□ -1.62
CD47-201ENST00000355354 SLC17A4Q9Y2C5 497 aa4.91□□□□□ -1.62
CD47-201ENST00000355354 PGPEP1LA6NFU8 196 aa4.91□□□□□ -1.62
CD47-201ENST00000355354 OR6C65A6NJZ3 312 aa4.91□□□□□ -1.62
CD47-201ENST00000355354 LMO7DNF2Z398 122 aa4.91□□□□□ -1.62
CD47-201ENST00000355354 H0YL77 283 aa4.91□□□□□ -1.62
CD47-201ENST00000355354 CRTAPO75718 401 aaPredicted RBP4.91□□□□□ -1.62
CD47-201ENST00000355354 ZNF35P13682 527 aa4.91□□□□□ -1.62
CD47-201ENST00000355354 PNLIPRP2P54317 469 aa4.91□□□□□ -1.62
CD47-201ENST00000355354 RHAGQ02094 409 aa4.91□□□□□ -1.62
CD47-201ENST00000355354 DPTQ07507 201 aa4.91□□□□□ -1.62
CD47-201ENST00000355354 MEF2DQ14814 521 aa4.91□□□□□ -1.62
CD47-201ENST00000355354 CEBPEQ15744 281 aa4.91□□□□□ -1.62
CD47-201ENST00000355354 C3AR1Q16581 482 aa4.91□□□□□ -1.62
CD47-201ENST00000355354 ZSWIM7Q19AV6 140 aa4.91□□□□□ -1.62
CD47-201ENST00000355354 PRAMEF20Q5VT98 475 aa4.91□□□□□ -1.62
CD47-201ENST00000355354 GPR139Q6DWJ6 353 aa4.91□□□□□ -1.62
CD47-201ENST00000355354 Q8NA96 180 aa4.91□□□□□ -1.62
CD47-201ENST00000355354 OR5W2Q8NH69 310 aa4.91□□□□□ -1.62
CD47-201ENST00000355354 COQ8AQ8NI60 647 aa4.91□□□□□ -1.62
CD47-201ENST00000355354 TMEM239Q8WW34 195 aa4.91□□□□□ -1.62
CD47-201ENST00000355354 CPNE2Q96FN4 548 aaPredicted RBP4.91□□□□□ -1.62
CD47-201ENST00000355354 USB1Q9BQ65 265 aaKnown RBP4.91□□□□□ -1.62
CD47-201ENST00000355354 WDR77Q9BQA1 342 aaPredicted RBP4.91□□□□□ -1.62
CD47-201ENST00000355354 ZNF350Q9GZX5 532 aa4.91□□□□□ -1.62
CD47-201ENST00000355354 TPRKBQ9Y3C4 175 aa4.91□□□□□ -1.62
CD47-201ENST00000355354 SNX5Q9Y5X3 404 aa4.91□□□□□ -1.62
CD47-201ENST00000355354 PINLYPA6NC86 204 aa4.91□□□□□ -1.62
CD47-201ENST00000355354 MS4A18H0YCH9 400 aa4.91□□□□□ -1.62
CD47-201ENST00000355354 NPIPB7O75200 414 aa4.91□□□□□ -1.62
CD47-201ENST00000355354 PGCP20142 388 aa4.91□□□□□ -1.62
CD47-201ENST00000355354 DUSP3P51452 185 aaPredicted RBP4.91□□□□□ -1.62
CD47-201ENST00000355354 TSPAN31Q12999 210 aa4.91□□□□□ -1.62
CD47-201ENST00000355354 HLXQ14774 488 aaPredicted RBP4.91□□□□□ -1.62
CD47-201ENST00000355354 MS4A18Q3C1V0 323 aa4.91□□□□□ -1.62
CD47-201ENST00000355354 GLT8D1Q68CQ7 371 aa4.91□□□□□ -1.62
CD47-201ENST00000355354 STAC2Q6ZMT1 411 aa4.91□□□□□ -1.62
CD47-201ENST00000355354 LSMEM1Q8N8F7 131 aa4.91□□□□□ -1.62
CD47-201ENST00000355354 TMEM80Q96HE8 168 aa4.91□□□□□ -1.62
CD47-201ENST00000355354 ARHGDIGQ99819 225 aa4.91□□□□□ -1.62
CD47-201ENST00000355354 PRRG4Q9BZD6 226 aa4.91□□□□□ -1.62
CD47-201ENST00000355354 PRM3Q9NNZ6 103 aa4.91□□□□□ -1.62
CD47-201ENST00000355354 EMC7Q9NPA0 242 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms