RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 OR1M1Q8NGA1 313 aa12.05□□□□□ -0.48
SCN8A-202ENST00000355133 NANPQ8TBE9 248 aa12.05□□□□□ -0.48
SCN8A-202ENST00000355133 PURGQ9UJV8 347 aaKnown RBP12.05□□□□□ -0.48
SCN8A-202ENST00000355133 MYH4Q9Y623 1939 aa12.05□□□□□ -0.48
SCN8A-202ENST00000355133 VAMP5O95183 116 aa12.05□□□□□ -0.48
SCN8A-202ENST00000355133 APOA2P02652 100 aa12.05□□□□□ -0.48
SCN8A-202ENST00000355133 ACVR1Q04771 509 aa12.05□□□□□ -0.48
SCN8A-202ENST00000355133 LGI3Q8N145 548 aa12.05□□□□□ -0.48
SCN8A-202ENST00000355133 SLC30A7Q8NEW0 376 aa12.05□□□□□ -0.48
SCN8A-202ENST00000355133 OR51A2Q8NGJ7 313 aa12.05□□□□□ -0.48
SCN8A-202ENST00000355133 CMTM2Q8TAZ6 248 aa12.05□□□□□ -0.48
SCN8A-202ENST00000355133 GON7Q9BXV9 100 aa12.05□□□□□ -0.48
SCN8A-202ENST00000355133 MED29Q9NX70 200 aa12.05□□□□□ -0.48
SCN8A-202ENST00000355133 TBX21Q9UL17 535 aa12.05□□□□□ -0.48
SCN8A-202ENST00000355133 SLCO1B1Q9Y6L6 691 aa12.05□□□□□ -0.48
SCN8A-202ENST00000355133 EMDP50402 254 aa12.05□□□□□ -0.48
SCN8A-202ENST00000355133 CLDN15P56746 228 aa12.05□□□□□ -0.48
SCN8A-202ENST00000355133 DUSP8Q13202 625 aa12.05□□□□□ -0.48
SCN8A-202ENST00000355133 BTN1A1Q13410 526 aa12.05□□□□□ -0.48
SCN8A-202ENST00000355133 SSX9Q7RTT3 188 aa12.05□□□□□ -0.48
SCN8A-202ENST00000355133 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.05□□□□□ -0.48
SCN8A-202ENST00000355133 OR51A4Q8NGJ6 313 aa12.05□□□□□ -0.48
SCN8A-202ENST00000355133 PHYHIPQ92561 330 aa12.05□□□□□ -0.48
SCN8A-202ENST00000355133 EDEM2Q9BV94 578 aa12.05□□□□□ -0.48
SCN8A-202ENST00000355133 CHST2Q9Y4C5 530 aa12.05□□□□□ -0.48
SCN8A-202ENST00000355133 MAGEB4O15481 346 aaPredicted RBP12.05□□□□□ -0.48
SCN8A-202ENST00000355133 ZGLP1P0C6A0 271 aa12.05□□□□□ -0.48
SCN8A-202ENST00000355133 RPL18Q07020 188 aaKnown RBP12.05□□□□□ -0.48
SCN8A-202ENST00000355133 SELENBP1Q13228 472 aa12.05□□□□□ -0.48
SCN8A-202ENST00000355133 PRSS35Q8N3Z0 413 aa12.05□□□□□ -0.48
SCN8A-202ENST00000355133 RNF167Q9H6Y7 350 aa12.05□□□□□ -0.48
SCN8A-202ENST00000355133 TMEM9BQ9NQ34 198 aa12.05□□□□□ -0.48
SCN8A-202ENST00000355133 PPP1R3CQ9UQK1 317 aa12.05□□□□□ -0.48
SCN8A-202ENST00000355133 TRGV8A0A0C4DH27 118 aa12.05□□□□□ -0.48
SCN8A-202ENST00000355133 GLB1P16278 677 aa12.05□□□□□ -0.48
SCN8A-202ENST00000355133 PCSK6P29122 969 aa12.05□□□□□ -0.48
SCN8A-202ENST00000355133 WDR88Q6ZMY6 472 aa12.05□□□□□ -0.48
SCN8A-202ENST00000355133 FAM185AQ8N0U4 392 aa12.05□□□□□ -0.48
SCN8A-202ENST00000355133 SLCO4A1Q96BD0 722 aa12.05□□□□□ -0.48
SCN8A-202ENST00000355133 SPACA5Q96QH8 159 aa12.05□□□□□ -0.48
SCN8A-202ENST00000355133 HINT3Q9NQE9 182 aaKnown RBP12.05□□□□□ -0.48
SCN8A-202ENST00000355133 OR2W5A6NFC9 320 aa12.04□□□□□ -0.48
SCN8A-202ENST00000355133 RPS27P42677 84 aaKnown RBP12.04□□□□□ -0.48
SCN8A-202ENST00000355133 OR2B11Q5JQS5 317 aa12.04□□□□□ -0.48
SCN8A-202ENST00000355133 SYT6Q5T7P8 510 aaPredicted RBP12.04□□□□□ -0.48
SCN8A-202ENST00000355133 PMS2P2O95744 297 aa12.04□□□□□ -0.48
SCN8A-202ENST00000355133 GLI4P10075 376 aa12.04□□□□□ -0.48
SCN8A-202ENST00000355133 CNR1P21554 472 aa12.04□□□□□ -0.48
SCN8A-202ENST00000355133 EMP3P54852 163 aa12.04□□□□□ -0.48
SCN8A-202ENST00000355133 ELLP55199 621 aaPredicted RBP12.04□□□□□ -0.48
SCN8A-202ENST00000355133 AGBL4Q5VU57 503 aa12.04□□□□□ -0.48
SCN8A-202ENST00000355133 PAQR6Q6TCH4 344 aa12.04□□□□□ -0.48
SCN8A-202ENST00000355133 ZNF620Q6ZNG0 422 aa12.04□□□□□ -0.48
SCN8A-202ENST00000355133 OR2L13Q8N349 312 aa12.04□□□□□ -0.48
SCN8A-202ENST00000355133 CPEB3Q8NE35 698 aaKnown RBP12.04□□□□□ -0.48
SCN8A-202ENST00000355133 MAFAQ8NHW3 353 aaPredicted RBP12.04□□□□□ -0.48
SCN8A-202ENST00000355133 IGLV3-25P01717 112 aa12.04□□□□□ -0.48
SCN8A-202ENST00000355133 CEACAM5P06731 702 aa12.04□□□□□ -0.48
SCN8A-202ENST00000355133 BSGP35613 385 aa12.04□□□□□ -0.48
SCN8A-202ENST00000355133 GNB2P62879 340 aa12.04□□□□□ -0.48
SCN8A-202ENST00000355133 CCL7P80098 99 aa12.04□□□□□ -0.48
SCN8A-202ENST00000355133 THEM4Q5T1C6 240 aa12.04□□□□□ -0.48
SCN8A-202ENST00000355133 GCNT2Q8N0V5 402 aa12.04□□□□□ -0.48
SCN8A-202ENST00000355133 ZNF439Q8NDP4 499 aa12.04□□□□□ -0.48
SCN8A-202ENST00000355133 SARAFQ96BY9 339 aa12.04□□□□□ -0.48
SCN8A-202ENST00000355133 MED18Q9BUE0 208 aa12.04□□□□□ -0.48
SCN8A-202ENST00000355133 RIMS4Q9H426 269 aaPredicted RBP12.04□□□□□ -0.48
SCN8A-202ENST00000355133 PTTG3PQ9NZH4 202 aa12.04□□□□□ -0.48
SCN8A-202ENST00000355133 M0R135 149 aa12.04□□□□□ -0.48
SCN8A-202ENST00000355133 ECI1P42126 302 aa12.04□□□□□ -0.48
SCN8A-202ENST00000355133 MYBPHQ13203 477 aa12.04□□□□□ -0.48
SCN8A-202ENST00000355133 PRAMEF5Q5TYX0 476 aa12.04□□□□□ -0.48
SCN8A-202ENST00000355133 PRAMEF6Q5VXH4 476 aa12.04□□□□□ -0.48
SCN8A-202ENST00000355133 Q6ZS52 159 aa12.04□□□□□ -0.48
SCN8A-202ENST00000355133 RDH5Q92781 318 aa12.04□□□□□ -0.48
SCN8A-202ENST00000355133 ZNF799Q96GE5 643 aa12.04□□□□□ -0.48
SCN8A-202ENST00000355133 OPALINQ96PE5 141 aa12.04□□□□□ -0.48
SCN8A-202ENST00000355133 TXN2Q99757 166 aa12.04□□□□□ -0.48
SCN8A-202ENST00000355133 SLC25A37Q9NYZ2 338 aa12.04□□□□□ -0.48
SCN8A-202ENST00000355133 PMS2P1A4D2B8 440 aa12.03□□□□□ -0.48
SCN8A-202ENST00000355133 ZNF195O14628 629 aa12.03□□□□□ -0.48
SCN8A-202ENST00000355133 DVL1O14640 695 aa12.03□□□□□ -0.48
SCN8A-202ENST00000355133 SCGB1D1O95968 90 aa12.03□□□□□ -0.48
SCN8A-202ENST00000355133 CHRM2P08172 466 aa12.03□□□□□ -0.48
SCN8A-202ENST00000355133 ARR3P36575 388 aa12.03□□□□□ -0.48
SCN8A-202ENST00000355133 DVL1P1P54792 670 aaPredicted RBP12.03□□□□□ -0.48
SCN8A-202ENST00000355133 ZNF266Q14584 549 aa12.03□□□□□ -0.48
SCN8A-202ENST00000355133 Q6ZNB5 142 aa12.03□□□□□ -0.48
SCN8A-202ENST00000355133 MBOAT4Q96T53 435 aa12.03□□□□□ -0.48
SCN8A-202ENST00000355133 OIP5O43482 229 aa12.03□□□□□ -0.48
SCN8A-202ENST00000355133 GLAP06280 429 aa12.03□□□□□ -0.48
SCN8A-202ENST00000355133 GLRA1P23415 457 aa12.03□□□□□ -0.48
SCN8A-202ENST00000355133 HOXD11P31277 338 aaPredicted RBP12.03□□□□□ -0.48
SCN8A-202ENST00000355133 CCR9P51686 369 aa12.03□□□□□ -0.48
SCN8A-202ENST00000355133 ZNF626Q68DY1 528 aa12.03□□□□□ -0.48
SCN8A-202ENST00000355133 ARIH2OSQ8N7S6 290 aa12.03□□□□□ -0.48
SCN8A-202ENST00000355133 OR10X1Q8NGY0 326 aa12.03□□□□□ -0.48
SCN8A-202ENST00000355133 ZNF75AQ96N20 296 aa12.03□□□□□ -0.48
SCN8A-202ENST00000355133 GINS3Q9BRX5 216 aa12.03□□□□□ -0.48
SCN8A-202ENST00000355133 EXOSC3Q9NQT5 275 aaKnown RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms