RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 IP6K3Q96PC2 410 aa8.49□□□□□ -1.05
SMG6-202ENST00000354901 NMNAT3Q96T66 252 aa8.49□□□□□ -1.05
SMG6-202ENST00000354901 LANCL2Q9NS86 450 aa8.49□□□□□ -1.05
SMG6-202ENST00000354901 FBXL21Q9UKT6 434 aa8.49□□□□□ -1.05
SMG6-202ENST00000354901 URGCP-MRPS24S4R325 110 aa8.49□□□□□ -1.05
SMG6-202ENST00000354901 RP1P56715 2156 aa8.49□□□□□ -1.05
SMG6-202ENST00000354901 TRAV14DV4A0A0A6YYC5 116 aa8.49□□□□□ -1.05
SMG6-202ENST00000354901 TRBV2A0A0J9YWF9 115 aa8.49□□□□□ -1.05
SMG6-202ENST00000354901 A0A1W2PPE2 198 aa8.49□□□□□ -1.05
SMG6-202ENST00000354901 C5orf51A6NDU8 294 aa8.49□□□□□ -1.05
SMG6-202ENST00000354901 LYPD3O95274 346 aa8.49□□□□□ -1.05
SMG6-202ENST00000354901 RAB6AP20340 208 aa8.49□□□□□ -1.05
SMG6-202ENST00000354901 VAMP1P23763 118 aa8.49□□□□□ -1.05
SMG6-202ENST00000354901 CDK2P24941 298 aa8.49□□□□□ -1.05
SMG6-202ENST00000354901 OR8G1Q15617 311 aa8.49□□□□□ -1.05
SMG6-202ENST00000354901 HACD4Q5VWC8 232 aa8.49□□□□□ -1.05
SMG6-202ENST00000354901 RNF44Q7L0R7 432 aa8.49□□□□□ -1.05
SMG6-202ENST00000354901 SKA3Q8IX90 412 aa8.49□□□□□ -1.05
SMG6-202ENST00000354901 NT5CQ8TCD5 201 aa8.49□□□□□ -1.05
SMG6-202ENST00000354901 ZPLD1Q8TCW7 415 aa8.49□□□□□ -1.05
SMG6-202ENST00000354901 RSC1A1Q92681 617 aa8.49□□□□□ -1.05
SMG6-202ENST00000354901 NECAB3Q96P71 396 aaPredicted RBP8.49□□□□□ -1.05
SMG6-202ENST00000354901 TSSK2Q96PF2 358 aa8.49□□□□□ -1.05
SMG6-202ENST00000354901 SULT4A1Q9BR01 284 aa8.49□□□□□ -1.05
SMG6-202ENST00000354901 SEBOXQ9HB31 216 aaPredicted RBP8.49□□□□□ -1.05
SMG6-202ENST00000354901 FAM60AQ9NP50 221 aa8.49□□□□□ -1.05
SMG6-202ENST00000354901 DUSP22Q9NRW4 184 aa8.49□□□□□ -1.05
SMG6-202ENST00000354901 PIAS3Q9Y6X2 628 aa8.49□□□□□ -1.05
SMG6-202ENST00000354901 CABIN1Q9Y6J0 2220 aa8.49□□□□□ -1.05
SMG6-202ENST00000354901 RFPL4AA6NLU0 287 aa8.49□□□□□ -1.05
SMG6-202ENST00000354901 RFPL4AL1F8VTS6 287 aa8.49□□□□□ -1.05
SMG6-202ENST00000354901 TSTD3H0UI37 97 aa8.49□□□□□ -1.05
SMG6-202ENST00000354901 M0QYG6 137 aa8.49□□□□□ -1.05
SMG6-202ENST00000354901 CYR61O00622 381 aa8.49□□□□□ -1.05
SMG6-202ENST00000354901 PLPP2O43688 288 aa8.49□□□□□ -1.05
SMG6-202ENST00000354901 FBXO24O75426 580 aa8.49□□□□□ -1.05
SMG6-202ENST00000354901 IGKV1D-16P01601 117 aa8.49□□□□□ -1.05
SMG6-202ENST00000354901 SMIM10L1P0DMW3 83 aa8.49□□□□□ -1.05
SMG6-202ENST00000354901 DDTP30046 118 aa8.49□□□□□ -1.05
SMG6-202ENST00000354901 GNALP38405 381 aa8.49□□□□□ -1.05
SMG6-202ENST00000354901 P2RX1P51575 399 aa8.49□□□□□ -1.05
SMG6-202ENST00000354901 KCNAB1Q14722 419 aa8.49□□□□□ -1.05
SMG6-202ENST00000354901 NKPD1Q17RQ9 610 aa8.49□□□□□ -1.05
SMG6-202ENST00000354901 KIRREL2Q6UWL6 708 aa8.49□□□□□ -1.05
SMG6-202ENST00000354901 RNF113BQ8IZP6 322 aaKnown RBP8.49□□□□□ -1.05
SMG6-202ENST00000354901 POMGNT2Q8NAT1 580 aa8.49□□□□□ -1.05
SMG6-202ENST00000354901 OR4A4PQ8NGN8 299 aa8.49□□□□□ -1.05
SMG6-202ENST00000354901 RASD2Q96D21 266 aa8.49□□□□□ -1.05
SMG6-202ENST00000354901 TM4SF19Q96DZ7 209 aa8.49□□□□□ -1.05
SMG6-202ENST00000354901 SMIM10Q96HG1 83 aa8.49□□□□□ -1.05
SMG6-202ENST00000354901 PGLYRP3Q96LB9 341 aa8.49□□□□□ -1.05
SMG6-202ENST00000354901 POFUT1Q9H488 388 aa8.49□□□□□ -1.05
SMG6-202ENST00000354901 RHOFQ9HBH0 211 aa8.49□□□□□ -1.05
SMG6-202ENST00000354901 FAM212BQ9NTI7 297 aaPredicted RBP8.49□□□□□ -1.05
SMG6-202ENST00000354901 CDV3Q9UKY7 258 aaKnown RBP8.49□□□□□ -1.05
SMG6-202ENST00000354901 ASXL3Q9C0F0 2248 aa8.48□□□□□ -1.05
SMG6-202ENST00000354901 A0A1B0GWJ7 208 aa8.48□□□□□ -1.05
SMG6-202ENST00000354901 GGT3PA6NGU5 568 aa8.48□□□□□ -1.05
SMG6-202ENST00000354901 BLOC1S5-TXNDC5H3BN57 136 aa8.48□□□□□ -1.05
SMG6-202ENST00000354901 BCL2L11O43521 198 aa8.48□□□□□ -1.05
SMG6-202ENST00000354901 MED6O75586 246 aa8.48□□□□□ -1.05
SMG6-202ENST00000354901 NDUFB6O95139 128 aa8.48□□□□□ -1.05
SMG6-202ENST00000354901 IFNGP01579 166 aa8.48□□□□□ -1.05
SMG6-202ENST00000354901 CPN1P15169 458 aa8.48□□□□□ -1.05
SMG6-202ENST00000354901 RPA2P15927 270 aa8.48□□□□□ -1.05
SMG6-202ENST00000354901 TMEM11P17152 192 aa8.48□□□□□ -1.05
SMG6-202ENST00000354901 SLC6A6P31641 620 aa8.48□□□□□ -1.05
SMG6-202ENST00000354901 RPS27P42677 84 aaKnown RBP8.48□□□□□ -1.05
SMG6-202ENST00000354901 RAB5CP51148 216 aa8.48□□□□□ -1.05
SMG6-202ENST00000354901 PRKXP51817 358 aa8.48□□□□□ -1.05
SMG6-202ENST00000354901 JMJD6Q6NYC1 403 aaPredicted RBP8.48□□□□□ -1.05
SMG6-202ENST00000354901 Q6ZSR6 202 aa8.48□□□□□ -1.05
SMG6-202ENST00000354901 TMPRSS11FQ6ZWK6 438 aa8.48□□□□□ -1.05
SMG6-202ENST00000354901 PPP1R1CQ8WVI7 109 aa8.48□□□□□ -1.05
SMG6-202ENST00000354901 PELI1Q96FA3 418 aa8.48□□□□□ -1.05
SMG6-202ENST00000354901 S100A16Q96FQ6 103 aaKnown RBP8.48□□□□□ -1.05
SMG6-202ENST00000354901 RBM18Q96H35 190 aaKnown RBP8.48□□□□□ -1.05
SMG6-202ENST00000354901 GAL3ST4Q96RP7 486 aa8.48□□□□□ -1.05
SMG6-202ENST00000354901 FAM117AQ9C073 453 aa8.48□□□□□ -1.05
SMG6-202ENST00000354901 TCF7L1Q9HCS4 588 aa8.48□□□□□ -1.05
SMG6-202ENST00000354901 LRIT1Q9P2V4 623 aa8.48□□□□□ -1.05
SMG6-202ENST00000354901 ASCC3Q8N3C0 2202 aaKnown RBP8.48□□□□□ -1.05
SMG6-202ENST00000354901 A0A0B4J2E0 115 aa8.48□□□□□ -1.05
SMG6-202ENST00000354901 A0A1B0GX12 115 aa8.48□□□□□ -1.05
SMG6-202ENST00000354901 MED19A0JLT2 244 aaPredicted RBP8.48□□□□□ -1.05
SMG6-202ENST00000354901 MBTPS2O43462 519 aa8.48□□□□□ -1.05
SMG6-202ENST00000354901 ITPKBP27987 946 aa8.48□□□□□ -1.05
SMG6-202ENST00000354901 PSG6Q00889 435 aa8.48□□□□□ -1.05
SMG6-202ENST00000354901 ENPP2Q13822 863 aa8.48□□□□□ -1.05
SMG6-202ENST00000354901 RPL13AP3Q6NVV1 102 aa8.48□□□□□ -1.05
SMG6-202ENST00000354901 CA13Q8N1Q1 262 aa8.48□□□□□ -1.05
SMG6-202ENST00000354901 ZNF511Q8NB15 262 aa8.48□□□□□ -1.05
SMG6-202ENST00000354901 SLC37A2Q8TED4 501 aa8.48□□□□□ -1.05
SMG6-202ENST00000354901 SECTM1Q8WVN6 248 aa8.48□□□□□ -1.05
SMG6-202ENST00000354901 DCUN1D4Q92564 292 aa8.48□□□□□ -1.05
SMG6-202ENST00000354901 SLC25A38Q96DW6 304 aa8.48□□□□□ -1.05
SMG6-202ENST00000354901 LMF1Q96S06 567 aa8.48□□□□□ -1.05
SMG6-202ENST00000354901 NRIP2Q9BQI9 281 aa8.48□□□□□ -1.05
SMG6-202ENST00000354901 KCNK15Q9H427 330 aa8.48□□□□□ -1.05
SMG6-202ENST00000354901 ZMAT3Q9HA38 289 aaKnown RBP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms