RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 PARP12Q9H0J9 701 aaKnown RBP9.11□□□□□ -0.95
SYNE1-203ENST00000354674 CYSLTR2Q9NS75 346 aa9.11□□□□□ -0.95
SYNE1-203ENST00000354674 FBXO34Q9NWN3 711 aa9.11□□□□□ -0.95
SYNE1-203ENST00000354674 WDR45Q9Y484 360 aa9.11□□□□□ -0.95
SYNE1-203ENST00000354674 FRG2CA6NGY1 282 aa9.1□□□□□ -0.95
SYNE1-203ENST00000354674 TUBAL3A6NHL2 446 aa9.1□□□□□ -0.95
SYNE1-203ENST00000354674 SULT2B1O00204 365 aa9.1□□□□□ -0.95
SYNE1-203ENST00000354674 UBE2CO00762 179 aa9.1□□□□□ -0.95
SYNE1-203ENST00000354674 CCSO14618 274 aa9.1□□□□□ -0.95
SYNE1-203ENST00000354674 CREBL2O60519 120 aaPredicted RBP9.1□□□□□ -0.95
SYNE1-203ENST00000354674 HIST1H2ABP04908 130 aa9.1□□□□□ -0.95
SYNE1-203ENST00000354674 ATXN8OSP0DMR3 200 aa9.1□□□□□ -0.95
SYNE1-203ENST00000354674 CEACAM1P13688 526 aa9.1□□□□□ -0.95
SYNE1-203ENST00000354674 DCAF7P61962 342 aa9.1□□□□□ -0.95
SYNE1-203ENST00000354674 EBPQ15125 230 aaKnown RBP9.1□□□□□ -0.95
SYNE1-203ENST00000354674 RSU1Q15404 277 aa9.1□□□□□ -0.95
SYNE1-203ENST00000354674 TAF13Q15543 124 aa9.1□□□□□ -0.95
SYNE1-203ENST00000354674 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.1□□□□□ -0.95
SYNE1-203ENST00000354674 LINC00303Q3SY05 128 aa9.1□□□□□ -0.95
SYNE1-203ENST00000354674 HIST3H2AQ7L7L0 130 aa9.1□□□□□ -0.95
SYNE1-203ENST00000354674 CPEB2Q7Z5Q1 589 aaKnown RBP9.1□□□□□ -0.95
SYNE1-203ENST00000354674 TMPRSS12Q86WS5 348 aa9.1□□□□□ -0.95
SYNE1-203ENST00000354674 MISPQ8IVT2 679 aa9.1□□□□□ -0.95
SYNE1-203ENST00000354674 APCDD1LQ8NCL9 501 aa9.1□□□□□ -0.95
SYNE1-203ENST00000354674 OR4N2Q8NGD1 307 aa9.1□□□□□ -0.95
SYNE1-203ENST00000354674 ZNF671Q8TAW3 534 aa9.1□□□□□ -0.95
SYNE1-203ENST00000354674 HIST1H2ACQ93077 130 aa9.1□□□□□ -0.95
SYNE1-203ENST00000354674 ARHGDIGQ99819 225 aa9.1□□□□□ -0.95
SYNE1-203ENST00000354674 OR8D2Q9GZM6 311 aa9.1□□□□□ -0.95
SYNE1-203ENST00000354674 OPN3Q9H1Y3 402 aaPredicted RBP9.1□□□□□ -0.95
SYNE1-203ENST00000354674 EGLN3Q9H6Z9 239 aa9.1□□□□□ -0.95
SYNE1-203ENST00000354674 SEBOXQ9HB31 216 aaPredicted RBP9.1□□□□□ -0.95
SYNE1-203ENST00000354674 KCNE5Q9UJ90 142 aa9.1□□□□□ -0.95
SYNE1-203ENST00000354674 ZNF223Q9UK11 482 aaPredicted RBP9.1□□□□□ -0.95
SYNE1-203ENST00000354674 SPAARA0A1B0GVQ0 90 aa9.1□□□□□ -0.95
SYNE1-203ENST00000354674 C9J4A7 227 aa9.1□□□□□ -0.95
SYNE1-203ENST00000354674 NPIPB9F8W1W9 429 aa9.1□□□□□ -0.95
SYNE1-203ENST00000354674 CYTIPO60759 359 aa9.1□□□□□ -0.95
SYNE1-203ENST00000354674 DCTDP32321 178 aa9.1□□□□□ -0.95
SYNE1-203ENST00000354674 TMEM201Q5SNT2 666 aa9.1□□□□□ -0.95
SYNE1-203ENST00000354674 LIN54Q6MZP7 749 aa9.1□□□□□ -0.95
SYNE1-203ENST00000354674 UBAC2Q8NBM4 344 aa9.1□□□□□ -0.95
SYNE1-203ENST00000354674 OR2Y1Q8NGV0 311 aa9.1□□□□□ -0.95
SYNE1-203ENST00000354674 OIT3Q8WWZ8 545 aa9.1□□□□□ -0.95
SYNE1-203ENST00000354674 METTL21AQ8WXB1 218 aa9.1□□□□□ -0.95
SYNE1-203ENST00000354674 MESP1Q9BRJ9 268 aa9.1□□□□□ -0.95
SYNE1-203ENST00000354674 FAM117AQ9C073 453 aa9.1□□□□□ -0.95
SYNE1-203ENST00000354674 Q9N2J8 555 aa9.1□□□□□ -0.95
SYNE1-203ENST00000354674 GFOD1Q9NXC2 390 aa9.1□□□□□ -0.95
SYNE1-203ENST00000354674 VSX1Q9NZR4 365 aaPredicted RBP9.1□□□□□ -0.95
SYNE1-203ENST00000354674 CHRNA9Q9UGM1 479 aa9.1□□□□□ -0.95
SYNE1-203ENST00000354674 KCND3Q9UK17 655 aa9.1□□□□□ -0.95
SYNE1-203ENST00000354674 ACAD8Q9UKU7 415 aa9.1□□□□□ -0.95
SYNE1-203ENST00000354674 PADI1Q9ULC6 663 aa9.1□□□□□ -0.95
SYNE1-203ENST00000354674 CBLCQ9ULV8 474 aa9.1□□□□□ -0.95
SYNE1-203ENST00000354674 SIRT4Q9Y6E7 314 aaPredicted RBP9.1□□□□□ -0.95
SYNE1-203ENST00000354674 ZNF292O60281 2723 aa9.1□□□□□ -0.95
SYNE1-203ENST00000354674 CNOT4O95628 575 aaKnown RBP9.1□□□□□ -0.95
SYNE1-203ENST00000354674 PSMB1P20618 241 aaKnown RBP9.1□□□□□ -0.95
SYNE1-203ENST00000354674 GABRA5P31644 462 aa9.1□□□□□ -0.95
SYNE1-203ENST00000354674 PNLIPRP2P54317 469 aa9.1□□□□□ -0.95
SYNE1-203ENST00000354674 PIN1Q13526 163 aaPredicted RBP9.1□□□□□ -0.95
SYNE1-203ENST00000354674 ANKRD39Q53RE8 183 aa9.1□□□□□ -0.95
SYNE1-203ENST00000354674 DHRS7BQ6IAN0 325 aaPredicted RBP9.1□□□□□ -0.95
SYNE1-203ENST00000354674 ZAR1Q86SH2 424 aa9.1□□□□□ -0.95
SYNE1-203ENST00000354674 OAFQ86UD1 273 aa9.1□□□□□ -0.95
SYNE1-203ENST00000354674 BCORP1Q8N888 145 aa9.1□□□□□ -0.95
SYNE1-203ENST00000354674 OR4D11Q8NGI4 311 aa9.1□□□□□ -0.95
SYNE1-203ENST00000354674 GPR148Q8TDV2 347 aa9.1□□□□□ -0.95
SYNE1-203ENST00000354674 FOXJ2Q9P0K8 574 aa9.1□□□□□ -0.95
SYNE1-203ENST00000354674 ENPP4Q9Y6X5 453 aa9.1□□□□□ -0.95
SYNE1-203ENST00000354674 PCNX2A6NKB5 2137 aa9.09□□□□□ -0.95
SYNE1-203ENST00000354674 F5H0A9 414 aaPredicted RBP9.09□□□□□ -0.95
SYNE1-203ENST00000354674 PHOX2AO14813 284 aa9.09□□□□□ -0.95
SYNE1-203ENST00000354674 SLC19A2O60779 497 aa9.09□□□□□ -0.95
SYNE1-203ENST00000354674 SLC34A2O95436 690 aa9.09□□□□□ -0.95
SYNE1-203ENST00000354674 SPI1P17947 270 aa9.09□□□□□ -0.95
SYNE1-203ENST00000354674 LIMS1P48059 325 aa9.09□□□□□ -0.95
SYNE1-203ENST00000354674 RBP2P50120 134 aa9.09□□□□□ -0.95
SYNE1-203ENST00000354674 HMGA2P52926 109 aa9.09□□□□□ -0.95
SYNE1-203ENST00000354674 MAPK14Q16539 360 aa9.09□□□□□ -0.95
SYNE1-203ENST00000354674 ZNF311Q5JNZ3 666 aa9.09□□□□□ -0.95
SYNE1-203ENST00000354674 GFI1BQ5VTD9 330 aa9.09□□□□□ -0.95
SYNE1-203ENST00000354674 FCRLBQ6BAA4 426 aa9.09□□□□□ -0.95
SYNE1-203ENST00000354674 METAP1DQ6UB28 335 aaPredicted RBP9.09□□□□□ -0.95
SYNE1-203ENST00000354674 LRRC28Q86X40 367 aaPredicted RBP9.09□□□□□ -0.95
SYNE1-203ENST00000354674 VRK2Q86Y07 508 aa9.09□□□□□ -0.95
SYNE1-203ENST00000354674 OR52I2Q8NH67 350 aa9.09□□□□□ -0.95
SYNE1-203ENST00000354674 LCORQ96JN0 433 aaPredicted RBP9.09□□□□□ -0.95
SYNE1-203ENST00000354674 JSRP1Q96MG2 331 aaPredicted RBP9.09□□□□□ -0.95
SYNE1-203ENST00000354674 ZNF582Q96NG8 517 aaPredicted RBP9.09□□□□□ -0.95
SYNE1-203ENST00000354674 G6PC3Q9BUM1 346 aa9.09□□□□□ -0.95
SYNE1-203ENST00000354674 ALX4Q9H161 411 aaPredicted RBP9.09□□□□□ -0.95
SYNE1-203ENST00000354674 SLC25A32Q9H2D1 315 aa9.09□□□□□ -0.95
SYNE1-203ENST00000354674 CRLF2Q9HC73 371 aa9.09□□□□□ -0.95
SYNE1-203ENST00000354674 MED9Q9NWA0 146 aa9.09□□□□□ -0.95
SYNE1-203ENST00000354674 COPS7AQ9UBW8 275 aa9.09□□□□□ -0.95
SYNE1-203ENST00000354674 C19orf25Q9UFG5 118 aaPredicted RBP9.09□□□□□ -0.95
SYNE1-203ENST00000354674 LAMP5Q9UJQ1 280 aa9.09□□□□□ -0.95
SYNE1-203ENST00000354674 ZNF443Q9Y2A4 671 aaPredicted RBP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 178.3 ms