RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 ZNF764Q96H86 408 aaPredicted RBP9.64□□□□□ -0.87
RTN3-204ENST00000354497 PPP3R2Q96LZ3 170 aa9.64□□□□□ -0.87
RTN3-204ENST00000354497 DUX5Q96PT3 197 aa9.64□□□□□ -0.87
RTN3-204ENST00000354497 ALKBH3Q96Q83 286 aaPredicted RBP9.64□□□□□ -0.87
RTN3-204ENST00000354497 DCLRE1CQ96SD1 692 aaKnown RBP9.64□□□□□ -0.87
RTN3-204ENST00000354497 ZNF251Q9BRH9 671 aa9.64□□□□□ -0.87
RTN3-204ENST00000354497 C1QTNF5Q9BXJ0 243 aa9.64□□□□□ -0.87
RTN3-204ENST00000354497 HEATR1Q9H583 2144 aaKnown RBP9.64□□□□□ -0.87
RTN3-204ENST00000354497 CD300AQ9UGN4 299 aa9.64□□□□□ -0.87
RTN3-204ENST00000354497 PFDN2Q9UHV9 154 aa9.64□□□□□ -0.87
RTN3-204ENST00000354497 MRPS7Q9Y2R9 242 aaKnown RBP9.64□□□□□ -0.87
RTN3-204ENST00000354497 TMEM129A0AVI4 362 aa9.63□□□□□ -0.87
RTN3-204ENST00000354497 MEIOCA2RUB1 952 aa9.63□□□□□ -0.87
RTN3-204ENST00000354497 SLC28A1O00337 649 aa9.63□□□□□ -0.87
RTN3-204ENST00000354497 CFLARO15519 480 aa9.63□□□□□ -0.87
RTN3-204ENST00000354497 EIF1BO60739 113 aaKnown RBP9.63□□□□□ -0.87
RTN3-204ENST00000354497 NPPAP01160 153 aa9.63□□□□□ -0.87
RTN3-204ENST00000354497 HPXP02790 462 aa9.63□□□□□ -0.87
RTN3-204ENST00000354497 S100A8P05109 93 aa9.63□□□□□ -0.87
RTN3-204ENST00000354497 GPIP06744 558 aa9.63□□□□□ -0.87
RTN3-204ENST00000354497 IGFBP1P08833 259 aaPredicted RBP9.63□□□□□ -0.87
RTN3-204ENST00000354497 UMPSP11172 480 aa9.63□□□□□ -0.87
RTN3-204ENST00000354497 COL8A2P25067 703 aa9.63□□□□□ -0.87
RTN3-204ENST00000354497 FASP25445 335 aa9.63□□□□□ -0.87
RTN3-204ENST00000354497 CAPZA2P47755 286 aa9.63□□□□□ -0.87
RTN3-204ENST00000354497 NUDT2P50583 147 aa9.63□□□□□ -0.87
RTN3-204ENST00000354497 RPS26P62854 115 aaKnown RBP9.63□□□□□ -0.87
RTN3-204ENST00000354497 PDE7AQ13946 482 aa9.63□□□□□ -0.87
RTN3-204ENST00000354497 DAG1Q14118 895 aa9.63□□□□□ -0.87
RTN3-204ENST00000354497 SLC17A1Q14916 467 aa9.63□□□□□ -0.87
RTN3-204ENST00000354497 KIAA0040Q15053 153 aa9.63□□□□□ -0.87
RTN3-204ENST00000354497 ELFN2Q5R3F8 820 aa9.63□□□□□ -0.87
RTN3-204ENST00000354497 OTUD3Q5T2D3 398 aaPredicted RBP9.63□□□□□ -0.87
RTN3-204ENST00000354497 TTC23Q5W5X9 447 aa9.63□□□□□ -0.87
RTN3-204ENST00000354497 CLEC6AQ6EIG7 209 aa9.63□□□□□ -0.87
RTN3-204ENST00000354497 C5orf46Q6UWT4 87 aa9.63□□□□□ -0.87
RTN3-204ENST00000354497 RBMS3Q6XE24 437 aaKnown RBP9.63□□□□□ -0.87
RTN3-204ENST00000354497 PIWIL3Q7Z3Z3 882 aaKnown RBP9.63□□□□□ -0.87
RTN3-204ENST00000354497 GRINAQ7Z429 371 aa9.63□□□□□ -0.87
RTN3-204ENST00000354497 R3HCC1LQ7Z5L2 792 aaKnown RBP9.63□□□□□ -0.87
RTN3-204ENST00000354497 MYPOPQ86VE0 399 aaPredicted RBP9.63□□□□□ -0.87
RTN3-204ENST00000354497 ZDHHC13Q8IUH4 622 aa9.63□□□□□ -0.87
RTN3-204ENST00000354497 RDH10Q8IZV5 341 aa9.63□□□□□ -0.87
RTN3-204ENST00000354497 GDPD1Q8N9F7 314 aa9.63□□□□□ -0.87
RTN3-204ENST00000354497 OR9K2Q8NGE7 335 aa9.63□□□□□ -0.87
RTN3-204ENST00000354497 RDH5Q92781 318 aa9.63□□□□□ -0.87
RTN3-204ENST00000354497 TMEM45BQ96B21 275 aa9.63□□□□□ -0.87
RTN3-204ENST00000354497 DDIT4LQ96D03 193 aa9.63□□□□□ -0.87
RTN3-204ENST00000354497 ZNF385AQ96PM9 386 aaKnown RBP9.63□□□□□ -0.87
RTN3-204ENST00000354497 SDF2Q99470 211 aa9.63□□□□□ -0.87
RTN3-204ENST00000354497 SEC22CQ9BRL7 303 aa9.63□□□□□ -0.87
RTN3-204ENST00000354497 RACGAP1Q9H0H5 632 aa9.63□□□□□ -0.87
RTN3-204ENST00000354497 SLC52A3Q9NQ40 469 aa9.63□□□□□ -0.87
RTN3-204ENST00000354497 ABCB10Q9NRK6 738 aa9.63□□□□□ -0.87
RTN3-204ENST00000354497 KIF25Q9UIL4 384 aa9.63□□□□□ -0.87
RTN3-204ENST00000354497 KCNE5Q9UJ90 142 aa9.63□□□□□ -0.87
RTN3-204ENST00000354497 RPS6KA6Q9UK32 745 aa9.63□□□□□ -0.87
RTN3-204ENST00000354497 SPATA2Q9UM82 520 aa9.63□□□□□ -0.87
RTN3-204ENST00000354497 CMAHPQ9Y471 501 aa9.63□□□□□ -0.87
RTN3-204ENST00000354497 SNX5Q9Y5X3 404 aa9.63□□□□□ -0.87
RTN3-204ENST00000354497 TMED7-TICAM2A0A0A6YYA0 188 aa9.62□□□□□ -0.87
RTN3-204ENST00000354497 TMEM72A0PK05 275 aa9.62□□□□□ -0.87
RTN3-204ENST00000354497 M0R233 179 aa9.62□□□□□ -0.87
RTN3-204ENST00000354497 PIP5K1BO14986 540 aa9.62□□□□□ -0.87
RTN3-204ENST00000354497 MPZL1O95297 269 aa9.62□□□□□ -0.87
RTN3-204ENST00000354497 C6orf47O95873 294 aa9.62□□□□□ -0.87
RTN3-204ENST00000354497 ACHEP22303 614 aa9.62□□□□□ -0.87
RTN3-204ENST00000354497 ALDH3B1P43353 468 aa9.62□□□□□ -0.87
RTN3-204ENST00000354497 SLC1A6P48664 564 aa9.62□□□□□ -0.87
RTN3-204ENST00000354497 CXCR4P61073 352 aa9.62□□□□□ -0.87
RTN3-204ENST00000354497 TSPAN5P62079 268 aa9.62□□□□□ -0.87
RTN3-204ENST00000354497 ZNF141Q15928 474 aa9.62□□□□□ -0.87
RTN3-204ENST00000354497 BAK1Q16611 211 aa9.62□□□□□ -0.87
RTN3-204ENST00000354497 ATP6AP1LQ52LC2 224 aa9.62□□□□□ -0.87
RTN3-204ENST00000354497 KLHL12Q53G59 568 aa9.62□□□□□ -0.87
RTN3-204ENST00000354497 SAMD4BQ5PRF9 694 aaKnown RBP9.62□□□□□ -0.87
RTN3-204ENST00000354497 LIPMQ5VYY2 423 aa9.62□□□□□ -0.87
RTN3-204ENST00000354497 THAP5Q7Z6K1 395 aa9.62□□□□□ -0.87
RTN3-204ENST00000354497 HMGN2P46Q86SG4 172 aa9.62□□□□□ -0.87
RTN3-204ENST00000354497 TIGD4Q8IY51 512 aa9.62□□□□□ -0.87
RTN3-204ENST00000354497 MCFD2Q8NI22 146 aa9.62□□□□□ -0.87
RTN3-204ENST00000354497 NANPQ8TBE9 248 aa9.62□□□□□ -0.87
RTN3-204ENST00000354497 MAGEE2Q8TD90 523 aaPredicted RBP9.62□□□□□ -0.87
RTN3-204ENST00000354497 BCL2L2Q92843 193 aaPredicted RBP9.62□□□□□ -0.87
RTN3-204ENST00000354497 SYT3Q9BQG1 590 aa9.62□□□□□ -0.87
RTN3-204ENST00000354497 SPATA9Q9BWV2 254 aa9.62□□□□□ -0.87
RTN3-204ENST00000354497 CRLF2Q9HC73 371 aa9.62□□□□□ -0.87
RTN3-204ENST00000354497 ZNF275Q9NSD4 429 aaPredicted RBP9.62□□□□□ -0.87
RTN3-204ENST00000354497 GPATCH2Q9NW75 528 aa9.62□□□□□ -0.87
RTN3-204ENST00000354497 TMED7Q9Y3B3 224 aa9.62□□□□□ -0.87
RTN3-204ENST00000354497 SNX13Q9Y5W8 968 aa9.62□□□□□ -0.87
RTN3-204ENST00000354497 CMYA5Q8N3K9 4069 aa9.61□□□□□ -0.87
RTN3-204ENST00000354497 A0A075B6Q4 140 aa9.61□□□□□ -0.87
RTN3-204ENST00000354497 IGHV2OR16-5A0A0B4J2B6 119 aa9.61□□□□□ -0.87
RTN3-204ENST00000354497 NPIPB8E9PQR5 432 aa9.61□□□□□ -0.87
RTN3-204ENST00000354497 TBX1O43435 398 aa9.61□□□□□ -0.87
RTN3-204ENST00000354497 SYNGR3O43761 229 aa9.61□□□□□ -0.87
RTN3-204ENST00000354497 FCMRO60667 390 aa9.61□□□□□ -0.87
RTN3-204ENST00000354497 SCN2BO60939 215 aa9.61□□□□□ -0.87
RTN3-204ENST00000354497 STX11O75558 287 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms