RNA–Protein interactions for RNA: ENST00000353739.8

RNF38-203, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 4,945 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-203ENST00000353739 ZNF584Q8IVC4 421 aa3.34□□□□□ -1.87
RNF38-203ENST00000353739 C9orf62Q8N4C0 152 aa3.34□□□□□ -1.87
RNF38-203ENST00000353739 OR2M3Q8NG83 312 aa3.34□□□□□ -1.87
RNF38-203ENST00000353739 SMAP2Q8WU79 429 aaPredicted RBP3.34□□□□□ -1.87
RNF38-203ENST00000353739 SNAPC3Q92966 411 aa3.34□□□□□ -1.87
RNF38-203ENST00000353739 SLC25A44Q96H78 314 aaPredicted RBP3.34□□□□□ -1.87
RNF38-203ENST00000353739 TECTBQ96PL2 329 aa3.34□□□□□ -1.87
RNF38-203ENST00000353739 PIGQQ9BRB3 760 aa3.34□□□□□ -1.87
RNF38-203ENST00000353739 SF3B5Q9BWJ5 86 aaKnown RBP3.34□□□□□ -1.87
RNF38-203ENST00000353739 IFT46Q9NQC8 304 aa3.34□□□□□ -1.87
RNF38-203ENST00000353739 PCDHB16Q9NRJ7 776 aa3.34□□□□□ -1.87
RNF38-203ENST00000353739 ABI3Q9P2A4 366 aa3.34□□□□□ -1.87
RNF38-203ENST00000353739 MYOTQ9UBF9 498 aa3.34□□□□□ -1.87
RNF38-203ENST00000353739 CYB5R1Q9UHQ9 305 aa3.34□□□□□ -1.87
RNF38-203ENST00000353739 KIF25Q9UIL4 384 aa3.34□□□□□ -1.87
RNF38-203ENST00000353739 ZNF391Q9UJN7 358 aa3.34□□□□□ -1.87
RNF38-203ENST00000353739 COA3Q9Y2R0 106 aaPredicted RBP3.34□□□□□ -1.87
RNF38-203ENST00000353739 B3GALT1Q9Y5Z6 326 aa3.34□□□□□ -1.87
RNF38-203ENST00000353739 HEATR5BQ9P2D3 2071 aa3.34□□□□□ -1.87
RNF38-203ENST00000353739 TMEM272A0A1B0GTI8 110 aa3.34□□□□□ -1.88
RNF38-203ENST00000353739 TMEM269A0A1B0GVZ9 245 aa3.34□□□□□ -1.88
RNF38-203ENST00000353739 LOC107986453A0A1B0GWG9 222 aa3.34□□□□□ -1.88
RNF38-203ENST00000353739 A0A1W2PPK0 400 aa3.34□□□□□ -1.88
RNF38-203ENST00000353739 A8MV72 311 aaPredicted RBP3.34□□□□□ -1.88
RNF38-203ENST00000353739 FAM171A2A8MVW0 826 aa3.34□□□□□ -1.88
RNF38-203ENST00000353739 F5H5P2 479 aa3.34□□□□□ -1.88
RNF38-203ENST00000353739 H7C1C5 153 aa3.34□□□□□ -1.88
RNF38-203ENST00000353739 EIF1AYO14602 144 aaKnown RBP3.34□□□□□ -1.88
RNF38-203ENST00000353739 ARPC1BO15143 372 aaKnown RBP3.34□□□□□ -1.88
RNF38-203ENST00000353739 LAMTOR5O43504 91 aa3.34□□□□□ -1.88
RNF38-203ENST00000353739 SYT7O43581 403 aa3.34□□□□□ -1.88
RNF38-203ENST00000353739 CYB5AP00167 134 aa3.34□□□□□ -1.88
RNF38-203ENST00000353739 PLGP00747 810 aaPredicted RBP3.34□□□□□ -1.88
RNF38-203ENST00000353739 ZNF883P0CG24 379 aa3.34□□□□□ -1.88
RNF38-203ENST00000353739 EIF1AXP47813 144 aaKnown RBP3.34□□□□□ -1.88
RNF38-203ENST00000353739 POU3F4P49335 361 aa3.34□□□□□ -1.88
RNF38-203ENST00000353739 SRP9P49458 86 aaKnown RBP3.34□□□□□ -1.88
RNF38-203ENST00000353739 PER3P56645 1201 aa3.34□□□□□ -1.88
RNF38-203ENST00000353739 LCN6P62502 163 aa3.34□□□□□ -1.88
RNF38-203ENST00000353739 MC2RQ01718 297 aa3.34□□□□□ -1.88
RNF38-203ENST00000353739 POU3F1Q03052 451 aaPredicted RBP3.34□□□□□ -1.88
RNF38-203ENST00000353739 SHBQ15464 509 aa3.34□□□□□ -1.88
RNF38-203ENST00000353739 FAM69BQ5VUD6 431 aa3.34□□□□□ -1.88
RNF38-203ENST00000353739 CHRDL2Q6WN34 429 aa3.34□□□□□ -1.88
RNF38-203ENST00000353739 DCXRQ7Z4W1 244 aa3.34□□□□□ -1.88
RNF38-203ENST00000353739 ZDHHC22Q8N966 263 aa3.34□□□□□ -1.88
RNF38-203ENST00000353739 UXS1Q8NBZ7 420 aa3.34□□□□□ -1.88
RNF38-203ENST00000353739 OR1M1Q8NGA1 313 aa3.34□□□□□ -1.88
RNF38-203ENST00000353739 SLAMF6Q96DU3 332 aa3.34□□□□□ -1.88
RNF38-203ENST00000353739 LMF1Q96S06 567 aa3.34□□□□□ -1.88
RNF38-203ENST00000353739 GFI1Q99684 422 aa3.34□□□□□ -1.88
RNF38-203ENST00000353739 CDC6Q99741 560 aa3.34□□□□□ -1.88
RNF38-203ENST00000353739 MGAT4CQ9UBM8 478 aa3.34□□□□□ -1.88
RNF38-203ENST00000353739 SLC5A6Q9Y289 635 aa3.34□□□□□ -1.88
RNF38-203ENST00000353739 MRPS18CQ9Y3D5 142 aaKnown RBP3.34□□□□□ -1.88
RNF38-203ENST00000353739 HSPB11Q9Y547 144 aa3.34□□□□□ -1.88
RNF38-203ENST00000353739 MDC1Q14676 2089 aaKnown RBP3.34□□□□□ -1.88
RNF38-203ENST00000353739 TEX51A0A1B0GUA7 166 aa3.33□□□□□ -1.88
RNF38-203ENST00000353739 C19orf67A6NJJ6 358 aa3.33□□□□□ -1.88
RNF38-203ENST00000353739 HMSDA8MTL9 139 aa3.33□□□□□ -1.88
RNF38-203ENST00000353739 MS4A18H0YCH9 400 aa3.33□□□□□ -1.88
RNF38-203ENST00000353739 FABP7O15540 132 aa3.33□□□□□ -1.88
RNF38-203ENST00000353739 SIGLEC6O43699 453 aa3.33□□□□□ -1.88
RNF38-203ENST00000353739 MTRF1O75570 445 aaKnown RBP3.33□□□□□ -1.88
RNF38-203ENST00000353739 ZNF43P17038 809 aa3.33□□□□□ -1.88
RNF38-203ENST00000353739 TCEA1P23193 301 aaKnown RBP3.33□□□□□ -1.88
RNF38-203ENST00000353739 THBS4P35443 961 aa3.33□□□□□ -1.88
RNF38-203ENST00000353739 AGFG1P52594 562 aaKnown RBP3.33□□□□□ -1.88
RNF38-203ENST00000353739 BIDP55957 195 aa3.33□□□□□ -1.88
RNF38-203ENST00000353739 INSM1Q01101 510 aaPredicted RBP3.33□□□□□ -1.88
RNF38-203ENST00000353739 MS4A18Q3C1V0 323 aa3.33□□□□□ -1.88
RNF38-203ENST00000353739 GXYLT1Q4G148 440 aa3.33□□□□□ -1.88
RNF38-203ENST00000353739 ZNF385CQ66K41 422 aaPredicted RBP3.33□□□□□ -1.88
RNF38-203ENST00000353739 ZNF627Q7L945 461 aa3.33□□□□□ -1.88
RNF38-203ENST00000353739 TMEM17Q86X19 198 aa3.33□□□□□ -1.88
RNF38-203ENST00000353739 IZUMO1Q8IYV9 350 aa3.33□□□□□ -1.88
RNF38-203ENST00000353739 ELMOD2Q8IZ81 293 aa3.33□□□□□ -1.88
RNF38-203ENST00000353739 GTPBP8Q8N3Z3 284 aaPredicted RBP3.33□□□□□ -1.88
RNF38-203ENST00000353739 TMEM156Q8N614 296 aa3.33□□□□□ -1.88
RNF38-203ENST00000353739 APCDD1LQ8NCL9 501 aa3.33□□□□□ -1.88
RNF38-203ENST00000353739 STEAP2Q8NFT2 490 aa3.33□□□□□ -1.88
RNF38-203ENST00000353739 PIGKQ92643 395 aa3.33□□□□□ -1.88
RNF38-203ENST00000353739 SPTSSAQ969W0 71 aa3.33□□□□□ -1.88
RNF38-203ENST00000353739 FYTTD1Q96QD9 318 aaKnown RBP3.33□□□□□ -1.88
RNF38-203ENST00000353739 NUDT22Q9BRQ3 303 aa3.33□□□□□ -1.88
RNF38-203ENST00000353739 URM1Q9BTM9 101 aaKnown RBP3.33□□□□□ -1.88
RNF38-203ENST00000353739 PBOV1Q9GZY1 135 aa3.33□□□□□ -1.88
RNF38-203ENST00000353739 EXO5Q9H790 373 aa3.33□□□□□ -1.88
RNF38-203ENST00000353739 AUNIPQ9H7T9 357 aa3.33□□□□□ -1.88
RNF38-203ENST00000353739 APMAPQ9HDC9 416 aa3.33□□□□□ -1.88
RNF38-203ENST00000353739 MRPL22Q9NWU5 206 aaKnown RBP3.33□□□□□ -1.88
RNF38-203ENST00000353739 TAS2R4Q9NYW5 299 aa3.33□□□□□ -1.88
RNF38-203ENST00000353739 EIF3KQ9UBQ5 218 aaKnown RBP3.33□□□□□ -1.88
RNF38-203ENST00000353739 FBXO4Q9UKT5 387 aa3.33□□□□□ -1.88
RNF38-203ENST00000353739 SCN2AQ99250 2005 aa3.33□□□□□ -1.88
RNF38-203ENST00000353739 TP53BP1Q12888 1972 aaPredicted RBP3.33□□□□□ -1.88
RNF38-203ENST00000353739 IGHV1-45A0A0A0MS14 117 aa3.33□□□□□ -1.88
RNF38-203ENST00000353739 CDC14CA4D256 554 aa3.33□□□□□ -1.88
RNF38-203ENST00000353739 NPIPA2E9PIF3 369 aa3.33□□□□□ -1.88
RNF38-203ENST00000353739 NPIPA3F8WFD2 350 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms