RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 MS4A7Q9GZW8 240 aaPredicted RBP7.72□□□□□ -1.17
TRIM55-204ENST00000353317 EVA1AQ9H8M9 152 aa7.72□□□□□ -1.17
TRIM55-204ENST00000353317 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.72□□□□□ -1.17
TRIM55-204ENST00000353317 MED9Q9NWA0 146 aa7.72□□□□□ -1.17
TRIM55-204ENST00000353317 ZNF337Q9Y3M9 751 aa7.72□□□□□ -1.17
TRIM55-204ENST00000353317 HS3ST3B1Q9Y662 390 aa7.72□□□□□ -1.17
TRIM55-204ENST00000353317 C2orf72A6NCS6 295 aa7.72□□□□□ -1.17
TRIM55-204ENST00000353317 SERINC4A6NH21 518 aa7.72□□□□□ -1.17
TRIM55-204ENST00000353317 ANXA2P2A6NMY6 339 aa7.72□□□□□ -1.17
TRIM55-204ENST00000353317 HMSDA8MTL9 139 aa7.72□□□□□ -1.17
TRIM55-204ENST00000353317 A8MXK9 166 aa7.72□□□□□ -1.17
TRIM55-204ENST00000353317 H7C417 338 aa7.72□□□□□ -1.17
TRIM55-204ENST00000353317 XRCC3O43542 346 aa7.72□□□□□ -1.17
TRIM55-204ENST00000353317 RP2O75695 350 aa7.72□□□□□ -1.17
TRIM55-204ENST00000353317 ABHD16AO95870 558 aa7.72□□□□□ -1.17
TRIM55-204ENST00000353317 GUSBP08236 651 aa7.72□□□□□ -1.17
TRIM55-204ENST00000353317 GABRA1P14867 456 aa7.72□□□□□ -1.17
TRIM55-204ENST00000353317 CSRP1P21291 193 aaKnown RBP7.72□□□□□ -1.17
TRIM55-204ENST00000353317 AQP2P41181 271 aa7.72□□□□□ -1.17
TRIM55-204ENST00000353317 RPS27P42677 84 aaKnown RBP7.72□□□□□ -1.17
TRIM55-204ENST00000353317 DLX5P56178 289 aa7.72□□□□□ -1.17
TRIM55-204ENST00000353317 ALKBH1Q13686 389 aaKnown RBP7.72□□□□□ -1.17
TRIM55-204ENST00000353317 PCOLCEQ15113 449 aa7.72□□□□□ -1.17
TRIM55-204ENST00000353317 RBMS2Q15434 407 aaKnown RBP7.72□□□□□ -1.17
TRIM55-204ENST00000353317 DCAF12L2Q5VW00 463 aa7.72□□□□□ -1.17
TRIM55-204ENST00000353317 B3GNTL1Q67FW5 361 aaPredicted RBP7.72□□□□□ -1.17
TRIM55-204ENST00000353317 SLC6A19Q695T7 634 aa7.72□□□□□ -1.17
TRIM55-204ENST00000353317 OR7E24Q6IFN5 339 aa7.72□□□□□ -1.17
TRIM55-204ENST00000353317 MARCH3Q86UD3 253 aa7.72□□□□□ -1.17
TRIM55-204ENST00000353317 OR10AC1Q8NH08 325 aa7.72□□□□□ -1.17
TRIM55-204ENST00000353317 SCARB1Q8WTV0 552 aa7.72□□□□□ -1.17
TRIM55-204ENST00000353317 ST8SIA4Q92187 359 aa7.72□□□□□ -1.17
TRIM55-204ENST00000353317 C3orf49Q96BT1 292 aa7.72□□□□□ -1.17
TRIM55-204ENST00000353317 NPAS1Q99742 590 aa7.72□□□□□ -1.17
TRIM55-204ENST00000353317 G6PC3Q9BUM1 346 aa7.72□□□□□ -1.17
TRIM55-204ENST00000353317 ARL6Q9H0F7 186 aa7.72□□□□□ -1.17
TRIM55-204ENST00000353317 SLITRK2Q9H156 845 aa7.72□□□□□ -1.17
TRIM55-204ENST00000353317 C12orf4Q9NQ89 552 aa7.72□□□□□ -1.17
TRIM55-204ENST00000353317 MTFP1Q9UDX5 166 aa7.72□□□□□ -1.17
TRIM55-204ENST00000353317 PTRH2Q9Y3E5 179 aaKnown RBP7.72□□□□□ -1.17
TRIM55-204ENST00000353317 ETV7Q9Y603 341 aa7.72□□□□□ -1.17
TRIM55-204ENST00000353317 SPENQ96T58 3664 aaKnown RBP7.72□□□□□ -1.17
TRIM55-204ENST00000353317 IGKV1D-42A0A075B6H8 117 aa7.71□□□□□ -1.17
TRIM55-204ENST00000353317 FXYD6-FXYD2A0A087WZ82 144 aa7.71□□□□□ -1.17
TRIM55-204ENST00000353317 TRBV5-5A0A0J9YX44 114 aa7.71□□□□□ -1.17
TRIM55-204ENST00000353317 SLC22A23A1A5C7 686 aa7.71□□□□□ -1.17
TRIM55-204ENST00000353317 TO15178 435 aa7.71□□□□□ -1.17
TRIM55-204ENST00000353317 RBBP9O75884 186 aa7.71□□□□□ -1.17
TRIM55-204ENST00000353317 CSTAP01040 98 aa7.71□□□□□ -1.17
TRIM55-204ENST00000353317 FCER2P06734 321 aa7.71□□□□□ -1.17
TRIM55-204ENST00000353317 KLK3P07288 261 aaPredicted RBP7.71□□□□□ -1.17
TRIM55-204ENST00000353317 TACSTD2P09758 323 aa7.71□□□□□ -1.17
TRIM55-204ENST00000353317 ZNF35P13682 527 aa7.71□□□□□ -1.17
TRIM55-204ENST00000353317 EFNB2P52799 333 aa7.71□□□□□ -1.17
TRIM55-204ENST00000353317 NUBP1P53384 320 aa7.71□□□□□ -1.17
TRIM55-204ENST00000353317 SLC26A5P58743 744 aa7.71□□□□□ -1.17
TRIM55-204ENST00000353317 PRPS1P60891 318 aa7.71□□□□□ -1.17
TRIM55-204ENST00000353317 MELKQ14680 651 aa7.71□□□□□ -1.17
TRIM55-204ENST00000353317 TOMM34Q15785 309 aaPredicted RBP7.71□□□□□ -1.17
TRIM55-204ENST00000353317 ODF4Q2M2E3 257 aa7.71□□□□□ -1.17
TRIM55-204ENST00000353317 DCAF12Q5T6F0 453 aa7.71□□□□□ -1.17
TRIM55-204ENST00000353317 ARSKQ6UWY0 536 aa7.71□□□□□ -1.17
TRIM55-204ENST00000353317 SLC16A9Q7RTY1 509 aa7.71□□□□□ -1.17
TRIM55-204ENST00000353317 OVCH2Q7RTZ1 564 aa7.71□□□□□ -1.17
TRIM55-204ENST00000353317 FAM122BQ7Z309 247 aa7.71□□□□□ -1.17
TRIM55-204ENST00000353317 BIVMQ86UB2 503 aa7.71□□□□□ -1.17
TRIM55-204ENST00000353317 MUC20Q8N307 709 aaPredicted RBP7.71□□□□□ -1.17
TRIM55-204ENST00000353317 STPG2Q8N412 459 aa7.71□□□□□ -1.17
TRIM55-204ENST00000353317 EXD3Q8N9H8 876 aa7.71□□□□□ -1.17
TRIM55-204ENST00000353317 OR8K3Q8NH51 312 aa7.71□□□□□ -1.17
TRIM55-204ENST00000353317 TMEM106AQ96A25 262 aa7.71□□□□□ -1.17
TRIM55-204ENST00000353317 ADAD1Q96M93 576 aaKnown RBP7.71□□□□□ -1.17
TRIM55-204ENST00000353317 GPX7Q96SL4 187 aaPredicted RBP7.71□□□□□ -1.17
TRIM55-204ENST00000353317 FXYD6Q9H0Q3 95 aa7.71□□□□□ -1.17
TRIM55-204ENST00000353317 TRBV11-1A0A0K0K1C0 115 aa7.71□□□□□ -1.18
TRIM55-204ENST00000353317 TMEM272A0A1B0GTI8 110 aa7.71□□□□□ -1.18
TRIM55-204ENST00000353317 UBE2QL1A1L167 161 aa7.71□□□□□ -1.18
TRIM55-204ENST00000353317 MEIS3P1A6NDR6 274 aa7.71□□□□□ -1.18
TRIM55-204ENST00000353317 TVP23AA6NH52 213 aa7.71□□□□□ -1.18
TRIM55-204ENST00000353317 H7C1C5 153 aa7.71□□□□□ -1.18
TRIM55-204ENST00000353317 RLN1P04808 185 aa7.71□□□□□ -1.18
TRIM55-204ENST00000353317 F13BP05160 661 aa7.71□□□□□ -1.18
TRIM55-204ENST00000353317 ANXA2P07355 339 aaKnown RBP7.71□□□□□ -1.18
TRIM55-204ENST00000353317 MAPK3P27361 379 aaPredicted RBP7.71□□□□□ -1.18
TRIM55-204ENST00000353317 CALCRP30988 508 aa7.71□□□□□ -1.18
TRIM55-204ENST00000353317 FBXW4P57775 412 aa7.71□□□□□ -1.18
TRIM55-204ENST00000353317 LCN6P62502 163 aa7.71□□□□□ -1.18
TRIM55-204ENST00000353317 GUCA2AQ02747 115 aa7.71□□□□□ -1.18
TRIM55-204ENST00000353317 GSG1LQ6UXU4 331 aa7.71□□□□□ -1.18
TRIM55-204ENST00000353317 FAM220AQ7Z4H9 259 aa7.71□□□□□ -1.18
TRIM55-204ENST00000353317 OR2AK2Q8NG84 335 aa7.71□□□□□ -1.18
TRIM55-204ENST00000353317 C15orf40Q8WUR7 153 aa7.71□□□□□ -1.18
TRIM55-204ENST00000353317 METTL21AQ8WXB1 218 aa7.71□□□□□ -1.18
TRIM55-204ENST00000353317 MOGAT1Q96PD6 335 aa7.71□□□□□ -1.18
TRIM55-204ENST00000353317 ARPC5LQ9BPX5 153 aa7.71□□□□□ -1.18
TRIM55-204ENST00000353317 WDR54Q9H977 334 aa7.71□□□□□ -1.18
TRIM55-204ENST00000353317 SRA1Q9HD15 236 aaKnown RBP7.71□□□□□ -1.18
TRIM55-204ENST00000353317 EXOSC3Q9NQT5 275 aaKnown RBP7.71□□□□□ -1.18
TRIM55-204ENST00000353317 UBQLN4Q9NRR5 601 aa7.71□□□□□ -1.18
TRIM55-204ENST00000353317 COPS7AQ9UBW8 275 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms