RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 ACTG1P63261 375 aa19.79■□□□□ 0.76
UPF3A-201ENST00000351487 GLYATL3Q5SZD4 288 aa19.79■□□□□ 0.76
UPF3A-201ENST00000351487 PAPD4Q6PIY7 484 aaKnown RBP19.79■□□□□ 0.76
UPF3A-201ENST00000351487 WDR77Q9BQA1 342 aaPredicted RBP19.79■□□□□ 0.76
UPF3A-201ENST00000351487 DPCDQ9BVM2 203 aaPredicted RBP19.79■□□□□ 0.76
UPF3A-201ENST00000351487 POTEKPQ9BYX7 375 aa19.79■□□□□ 0.76
UPF3A-201ENST00000351487 ALKBH4Q9NXW9 302 aa19.79■□□□□ 0.76
UPF3A-201ENST00000351487 ATXN7L1Q9ULK2 861 aaPredicted RBP19.79■□□□□ 0.76
UPF3A-201ENST00000351487 VDAC3Q9Y277 283 aa19.79■□□□□ 0.76
UPF3A-201ENST00000351487 ASCC3Q8N3C0 2202 aaKnown RBP19.79■□□□□ 0.76
UPF3A-201ENST00000351487 IGKV1D-43A0A0B4J1Z2 117 aa19.79■□□□□ 0.76
UPF3A-201ENST00000351487 TRBV11-1A0A0K0K1C0 115 aa19.79■□□□□ 0.76
UPF3A-201ENST00000351487 LOC390937A0A1W2PQ73 354 aa19.79■□□□□ 0.76
UPF3A-201ENST00000351487 LIPT2A6NK58 231 aa19.79■□□□□ 0.76
UPF3A-201ENST00000351487 VSTM2BA6NLU5 285 aa19.79■□□□□ 0.76
UPF3A-201ENST00000351487 FAM198BQ6UWH4 519 aa19.79■□□□□ 0.76
UPF3A-201ENST00000351487 OR8H3Q8N146 312 aa19.79■□□□□ 0.76
UPF3A-201ENST00000351487 OR13C3Q8NGS6 347 aa19.79■□□□□ 0.76
UPF3A-201ENST00000351487 TMPRSS13Q9BYE2 586 aa19.79■□□□□ 0.76
UPF3A-201ENST00000351487 CHIAQ9BZP6 476 aa19.79■□□□□ 0.76
UPF3A-201ENST00000351487 KLHL13Q9P2N7 655 aa19.79■□□□□ 0.76
UPF3A-201ENST00000351487 B3GALT5Q9Y2C3 310 aa19.79■□□□□ 0.76
UPF3A-201ENST00000351487 A0A1W2PNV4 684 aa19.78■□□□□ 0.76
UPF3A-201ENST00000351487 K7ESF4 209 aa19.78■□□□□ 0.76
UPF3A-201ENST00000351487 LDLRAD4O15165 306 aa19.78■□□□□ 0.76
UPF3A-201ENST00000351487 SNAPC5O75971 98 aa19.78■□□□□ 0.76
UPF3A-201ENST00000351487 EXOSC2Q13868 293 aaKnown RBP19.78■□□□□ 0.76
UPF3A-201ENST00000351487 CLPPQ16740 277 aaPredicted RBP19.78■□□□□ 0.76
UPF3A-201ENST00000351487 SLC25A53Q5H9E4 307 aa19.78■□□□□ 0.76
UPF3A-201ENST00000351487 ADGRE4PQ86SQ3 457 aa19.78■□□□□ 0.76
UPF3A-201ENST00000351487 OR6C1Q96RD1 312 aa19.78■□□□□ 0.76
UPF3A-201ENST00000351487 HRH3Q9Y5N1 445 aa19.78■□□□□ 0.76
UPF3A-201ENST00000351487 MRPS18BQ9Y676 258 aaKnown RBP19.78■□□□□ 0.76
UPF3A-201ENST00000351487 A0A0A6YYH2 397 aa19.78■□□□□ 0.76
UPF3A-201ENST00000351487 A0A1W2PQ72 361 aa19.78■□□□□ 0.76
UPF3A-201ENST00000351487 PLSCR5A0PG75 271 aa19.78■□□□□ 0.76
UPF3A-201ENST00000351487 A6NJ64 397 aa19.78■□□□□ 0.76
UPF3A-201ENST00000351487 DNASE1L1P49184 302 aa19.78■□□□□ 0.76
UPF3A-201ENST00000351487 C1orf100Q5SVJ3 147 aa19.78■□□□□ 0.76
UPF3A-201ENST00000351487 TMEM244Q5VVB8 128 aa19.78■□□□□ 0.76
UPF3A-201ENST00000351487 LYPD6Q86Y78 171 aa19.78■□□□□ 0.76
UPF3A-201ENST00000351487 LINC00346Q8IVM7 164 aa19.78■□□□□ 0.76
UPF3A-201ENST00000351487 NKAIN3Q8N8D7 197 aa19.78■□□□□ 0.76
UPF3A-201ENST00000351487 OR51A2Q8NGJ7 313 aa19.78■□□□□ 0.76
UPF3A-201ENST00000351487 RNF133Q8WVZ7 376 aa19.78■□□□□ 0.76
UPF3A-201ENST00000351487 CLDN23Q96B33 292 aa19.78■□□□□ 0.76
UPF3A-201ENST00000351487 SCPEP1Q9HB40 452 aa19.78■□□□□ 0.76
UPF3A-201ENST00000351487 MED29Q9NX70 200 aa19.78■□□□□ 0.76
UPF3A-201ENST00000351487 RALGAPA1Q6GYQ0 2036 aa19.77■□□□□ 0.76
UPF3A-201ENST00000351487 RPS10-NUDT3A0A1W2PQS6 291 aa19.77■□□□□ 0.76
UPF3A-201ENST00000351487 UBE2QL1A1L167 161 aa19.77■□□□□ 0.76
UPF3A-201ENST00000351487 LPLP06858 475 aa19.77■□□□□ 0.76
UPF3A-201ENST00000351487 MELTFP08582 738 aa19.77■□□□□ 0.76
UPF3A-201ENST00000351487 UBCP0CG48 685 aaKnown RBP19.77■□□□□ 0.76
UPF3A-201ENST00000351487 MSX1P28360 303 aa19.77■□□□□ 0.76
UPF3A-201ENST00000351487 MMP16P51512 607 aa19.77■□□□□ 0.76
UPF3A-201ENST00000351487 ELMOD2Q8IZ81 293 aa19.77■□□□□ 0.76
UPF3A-201ENST00000351487 OR51S1Q8NGJ8 323 aa19.77■□□□□ 0.76
UPF3A-201ENST00000351487 OR5L2Q8NGL0 311 aa19.77■□□□□ 0.76
UPF3A-201ENST00000351487 PMEPA1Q969W9 287 aa19.77■□□□□ 0.76
UPF3A-201ENST00000351487 MRGPRX4Q96LA9 322 aa19.77■□□□□ 0.76
UPF3A-201ENST00000351487 NKX3-1Q99801 234 aaPredicted RBP19.77■□□□□ 0.76
UPF3A-201ENST00000351487 IGLV3-32A0A0A0MS00 114 aa19.76■□□□□ 0.75
UPF3A-201ENST00000351487 TMEM269A0A1B0GVZ9 245 aa19.76■□□□□ 0.75
UPF3A-201ENST00000351487 SCRG1O75711 98 aa19.76■□□□□ 0.75
UPF3A-201ENST00000351487 ONECUT2O95948 504 aa19.76■□□□□ 0.75
UPF3A-201ENST00000351487 CD3DP04234 171 aa19.76■□□□□ 0.75
UPF3A-201ENST00000351487 C4BPBP20851 252 aa19.76■□□□□ 0.75
UPF3A-201ENST00000351487 DCDP81605 110 aaKnown RBP19.76■□□□□ 0.75
UPF3A-201ENST00000351487 GRK1Q15835 563 aa19.76■□□□□ 0.75
UPF3A-201ENST00000351487 CLLU1Q5K131 121 aa19.76■□□□□ 0.75
UPF3A-201ENST00000351487 ZNF385CQ66K41 422 aaPredicted RBP19.76■□□□□ 0.75
UPF3A-201ENST00000351487 STEAP1BQ6NZ63 245 aa19.76■□□□□ 0.75
UPF3A-201ENST00000351487 LRFN4Q6PJG9 635 aa19.76■□□□□ 0.75
UPF3A-201ENST00000351487 OR52B4Q8NGK2 314 aa19.76■□□□□ 0.75
UPF3A-201ENST00000351487 MARVELD3Q96A59 401 aa19.76■□□□□ 0.75
UPF3A-201ENST00000351487 PTX4Q96A99 478 aa19.76■□□□□ 0.75
UPF3A-201ENST00000351487 C5orf34Q96MH7 638 aa19.76■□□□□ 0.75
UPF3A-201ENST00000351487 RBP7Q96R05 134 aa19.76■□□□□ 0.75
UPF3A-201ENST00000351487 CGGBP1Q9UFW8 167 aaPredicted RBP19.76■□□□□ 0.75
UPF3A-201ENST00000351487 PISDQ9UG56 409 aa19.76■□□□□ 0.75
UPF3A-201ENST00000351487 UBQLN2Q9UHD9 624 aa19.76■□□□□ 0.75
UPF3A-201ENST00000351487 M0R233 179 aa19.76■□□□□ 0.75
UPF3A-201ENST00000351487 DOK2O60496 412 aa19.76■□□□□ 0.75
UPF3A-201ENST00000351487 EMP2P54851 167 aa19.76■□□□□ 0.75
UPF3A-201ENST00000351487 SEH1LQ96EE3 360 aa19.76■□□□□ 0.75
UPF3A-201ENST00000351487 SERINC1Q9NRX5 453 aa19.76■□□□□ 0.75
UPF3A-201ENST00000351487 KLRF1Q9NZS2 232 aa19.76■□□□□ 0.75
UPF3A-201ENST00000351487 PPP4R1LQ9P1A2 415 aa19.76■□□□□ 0.75
UPF3A-201ENST00000351487 RPH3AQ9Y2J0 694 aaPredicted RBP19.76■□□□□ 0.75
UPF3A-201ENST00000351487 RHBDD3Q9Y3P4 386 aa19.76■□□□□ 0.75
UPF3A-201ENST00000351487 MEIS3P1A6NDR6 274 aa19.75■□□□□ 0.75
UPF3A-201ENST00000351487 PTGDSP41222 190 aa19.75■□□□□ 0.75
UPF3A-201ENST00000351487 TAS2R19P59542 299 aa19.75■□□□□ 0.75
UPF3A-201ENST00000351487 GPR85P60893 370 aa19.75■□□□□ 0.75
UPF3A-201ENST00000351487 PLPPR5Q32ZL2 321 aa19.75■□□□□ 0.75
UPF3A-201ENST00000351487 NHLRC1Q6VVB1 395 aa19.75■□□□□ 0.75
UPF3A-201ENST00000351487 CDH26Q8IXH8 852 aa19.75■□□□□ 0.75
UPF3A-201ENST00000351487 GABRG1Q8N1C3 465 aa19.75■□□□□ 0.75
UPF3A-201ENST00000351487 CMKLR1Q99788 373 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 111.4 ms