RNA–Protein interactions for RNA: ENST00000350697.7

SEC13-202, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SEC13, Length 1,425 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-202ENST00000350697 OR51V1Q9H2C8 321 aa12.09□□□□□ -0.47
SEC13-202ENST00000350697 TOR3AQ9H497 397 aa12.09□□□□□ -0.47
SEC13-202ENST00000350697 UBTD1Q9HAC8 227 aa12.09□□□□□ -0.47
SEC13-202ENST00000350697 MRPL22Q9NWU5 206 aaKnown RBP12.09□□□□□ -0.47
SEC13-202ENST00000350697 SMPD3Q9NY59 655 aaPredicted RBP12.09□□□□□ -0.47
SEC13-202ENST00000350697 LHFPL6Q9Y693 200 aa12.09□□□□□ -0.47
SEC13-202ENST00000350697 TVP23AA6NH52 213 aa12.08□□□□□ -0.48
SEC13-202ENST00000350697 SGCEO43556 437 aa12.08□□□□□ -0.48
SEC13-202ENST00000350697 TLX2O43763 284 aaPredicted RBP12.08□□□□□ -0.48
SEC13-202ENST00000350697 PRKYO43930 277 aa12.08□□□□□ -0.48
SEC13-202ENST00000350697 SNAP29O95721 258 aa12.08□□□□□ -0.48
SEC13-202ENST00000350697 RPSAP08865 295 aaKnown RBP12.08□□□□□ -0.48
SEC13-202ENST00000350697 ZNF35P13682 527 aa12.08□□□□□ -0.48
SEC13-202ENST00000350697 APEX1P27695 318 aaKnown RBP12.08□□□□□ -0.48
SEC13-202ENST00000350697 APLNRP35414 380 aa12.08□□□□□ -0.48
SEC13-202ENST00000350697 CDC42P60953 191 aa12.08□□□□□ -0.48
SEC13-202ENST00000350697 ADAM8P78325 824 aa12.08□□□□□ -0.48
SEC13-202ENST00000350697 EFNB1P98172 346 aa12.08□□□□□ -0.48
SEC13-202ENST00000350697 TBC1D28Q2M2D7 210 aa12.08□□□□□ -0.48
SEC13-202ENST00000350697 KLHL12Q53G59 568 aa12.08□□□□□ -0.48
SEC13-202ENST00000350697 SLC35D3Q5M8T2 416 aa12.08□□□□□ -0.48
SEC13-202ENST00000350697 ZNF774Q6NX45 483 aa12.08□□□□□ -0.48
SEC13-202ENST00000350697 TCEANCQ8N8B7 351 aa12.08□□□□□ -0.48
SEC13-202ENST00000350697 ZNF511Q8NB15 262 aa12.08□□□□□ -0.48
SEC13-202ENST00000350697 CPEB3Q8NE35 698 aaKnown RBP12.08□□□□□ -0.48
SEC13-202ENST00000350697 GJC3Q8NFK1 279 aa12.08□□□□□ -0.48
SEC13-202ENST00000350697 OR1J2Q8NGS2 313 aa12.08□□□□□ -0.48
SEC13-202ENST00000350697 OR2AJ1Q8NGZ0 328 aa12.08□□□□□ -0.48
SEC13-202ENST00000350697 TMEM163Q8TC26 289 aa12.08□□□□□ -0.48
SEC13-202ENST00000350697 FBXW5Q969U6 566 aa12.08□□□□□ -0.48
SEC13-202ENST00000350697 HRASLS5Q96KN8 279 aa12.08□□□□□ -0.48
SEC13-202ENST00000350697 CISD1Q9NZ45 108 aaKnown RBP12.08□□□□□ -0.48
SEC13-202ENST00000350697 CYB5R1Q9UHQ9 305 aa12.08□□□□□ -0.48
SEC13-202ENST00000350697 EDARQ9UNE0 448 aa12.08□□□□□ -0.48
SEC13-202ENST00000350697 ATP23Q9Y6H3 246 aa12.08□□□□□ -0.48
SEC13-202ENST00000350697 COMMD3-BMI1R4GMX3 469 aa12.08□□□□□ -0.48
SEC13-202ENST00000350697 RAI1Q7Z5J4 1906 aaPredicted RBP12.08□□□□□ -0.48
SEC13-202ENST00000350697 MAGEA13PA6NCF6 341 aa12.07□□□□□ -0.48
SEC13-202ENST00000350697 E7EQL1 145 aa12.07□□□□□ -0.48
SEC13-202ENST00000350697 E9PQ18 207 aa12.07□□□□□ -0.48
SEC13-202ENST00000350697 M0R129 80 aa12.07□□□□□ -0.48
SEC13-202ENST00000350697 DOK2O60496 412 aa12.07□□□□□ -0.48
SEC13-202ENST00000350697 TMCC2O75069 709 aa12.07□□□□□ -0.48
SEC13-202ENST00000350697 COX5BP10606 129 aa12.07□□□□□ -0.48
SEC13-202ENST00000350697 SLC2A5P22732 501 aa12.07□□□□□ -0.48
SEC13-202ENST00000350697 STOMP27105 288 aa12.07□□□□□ -0.48
SEC13-202ENST00000350697 GSTT1P30711 240 aa12.07□□□□□ -0.48
SEC13-202ENST00000350697 GGT2P36268 569 aa12.07□□□□□ -0.48
SEC13-202ENST00000350697 ENTPD1P49961 510 aa12.07□□□□□ -0.48
SEC13-202ENST00000350697 HIST1H3AP68431 136 aa12.07□□□□□ -0.48
SEC13-202ENST00000350697 HIST2H3PS2Q5TEC6 136 aa12.07□□□□□ -0.48
SEC13-202ENST00000350697 SLC18B1Q6NT16 456 aa12.07□□□□□ -0.48
SEC13-202ENST00000350697 LYPD4Q6UWN0 246 aa12.07□□□□□ -0.48
SEC13-202ENST00000350697 B3GLCTQ6Y288 498 aa12.07□□□□□ -0.48
SEC13-202ENST00000350697 C20orf204Q6ZNR8 217 aa12.07□□□□□ -0.48
SEC13-202ENST00000350697 HIST2H3AQ71DI3 136 aa12.07□□□□□ -0.48
SEC13-202ENST00000350697 ZNF611Q8N823 705 aa12.07□□□□□ -0.48
SEC13-202ENST00000350697 BBS1Q8NFJ9 593 aa12.07□□□□□ -0.48
SEC13-202ENST00000350697 OR8J1Q8NGP2 316 aa12.07□□□□□ -0.48
SEC13-202ENST00000350697 NRGNQ92686 78 aa12.07□□□□□ -0.48
SEC13-202ENST00000350697 MBOAT4Q96T53 435 aa12.07□□□□□ -0.48
SEC13-202ENST00000350697 WDR76Q9H967 626 aa12.07□□□□□ -0.48
SEC13-202ENST00000350697 MARCH7Q9H992 704 aa12.07□□□□□ -0.48
SEC13-202ENST00000350697 CDH20Q9HBT6 801 aa12.07□□□□□ -0.48
SEC13-202ENST00000350697 BATF3Q9NR55 127 aa12.07□□□□□ -0.48
SEC13-202ENST00000350697 PLEK2Q9NYT0 353 aa12.07□□□□□ -0.48
SEC13-202ENST00000350697 NDRG4Q9ULP0 352 aaKnown RBP12.07□□□□□ -0.48
SEC13-202ENST00000350697 SPEF1Q9Y4P9 236 aa12.07□□□□□ -0.48
SEC13-202ENST00000350697 DSCAMO60469 2012 aa12.07□□□□□ -0.48
SEC13-202ENST00000350697 RER1O15258 196 aa12.06□□□□□ -0.48
SEC13-202ENST00000350697 NR4A1P22736 598 aa12.06□□□□□ -0.48
SEC13-202ENST00000350697 GDI2P50395 445 aaKnown RBP12.06□□□□□ -0.48
SEC13-202ENST00000350697 RPS7P62081 194 aaKnown RBP12.06□□□□□ -0.48
SEC13-202ENST00000350697 GALK2Q01415 458 aa12.06□□□□□ -0.48
SEC13-202ENST00000350697 HGFACQ04756 655 aa12.06□□□□□ -0.48
SEC13-202ENST00000350697 APOFQ13790 326 aa12.06□□□□□ -0.48
SEC13-202ENST00000350697 RAB35Q15286 201 aa12.06□□□□□ -0.48
SEC13-202ENST00000350697 PCK2Q16822 640 aa12.06□□□□□ -0.48
SEC13-202ENST00000350697 CCDC92Q53HC0 331 aaPredicted RBP12.06□□□□□ -0.48
SEC13-202ENST00000350697 TEX30Q5JUR7 227 aa12.06□□□□□ -0.48
SEC13-202ENST00000350697 NXNL2Q5VZ03 156 aa12.06□□□□□ -0.48
SEC13-202ENST00000350697 CORO6Q6QEF8 472 aa12.06□□□□□ -0.48
SEC13-202ENST00000350697 PAMR1Q6UXH9 720 aa12.06□□□□□ -0.48
SEC13-202ENST00000350697 VASH1Q7L8A9 365 aaPredicted RBP12.06□□□□□ -0.48
SEC13-202ENST00000350697 LINC00346Q8IVM7 164 aa12.06□□□□□ -0.48
SEC13-202ENST00000350697 NUP37Q8NFH4 326 aa12.06□□□□□ -0.48
SEC13-202ENST00000350697 FAM81AQ8TBF8 368 aa12.06□□□□□ -0.48
SEC13-202ENST00000350697 TRUB1Q8WWH5 349 aaKnown RBP12.06□□□□□ -0.48
SEC13-202ENST00000350697 POM121L2Q96KW2 1035 aa12.06□□□□□ -0.48
SEC13-202ENST00000350697 IL4I1Q96RQ9 567 aa12.06□□□□□ -0.48
SEC13-202ENST00000350697 INTS14Q96SY0 518 aa12.06□□□□□ -0.48
SEC13-202ENST00000350697 DHRS9Q9BPW9 319 aa12.06□□□□□ -0.48
SEC13-202ENST00000350697 HDHD2Q9H0R4 259 aa12.06□□□□□ -0.48
SEC13-202ENST00000350697 LIME1Q9H400 295 aa12.06□□□□□ -0.48
SEC13-202ENST00000350697 FAIMQ9NVQ4 179 aa12.06□□□□□ -0.48
SEC13-202ENST00000350697 IMPAD1Q9NX62 359 aa12.06□□□□□ -0.48
SEC13-202ENST00000350697 H2AFY2Q9P0M6 372 aaPredicted RBP12.06□□□□□ -0.48
SEC13-202ENST00000350697 ATPIF1Q9UII2 106 aa12.06□□□□□ -0.48
SEC13-202ENST00000350697 GDF2Q9UK05 429 aaPredicted RBP12.06□□□□□ -0.48
SEC13-202ENST00000350697 LOC100509620A0A075B734 347 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms