RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 STMN3Q9NZ72 180 aa6.15□□□□□ -1.42
TRIM55-203ENST00000350034 IL17BQ9UHF5 180 aa6.15□□□□□ -1.42
TRIM55-203ENST00000350034 SLC22A13Q9Y226 551 aa6.15□□□□□ -1.42
TRIM55-203ENST00000350034 LRP12Q9Y561 859 aa6.15□□□□□ -1.42
TRIM55-203ENST00000350034 MRPS18BQ9Y676 258 aaKnown RBP6.15□□□□□ -1.42
TRIM55-203ENST00000350034 V9GY05 133 aa6.15□□□□□ -1.42
TRIM55-203ENST00000350034 CEP295Q9C0D2 2601 aa6.15□□□□□ -1.43
TRIM55-203ENST00000350034 CFAP46Q8IYW2 2715 aa6.15□□□□□ -1.43
TRIM55-203ENST00000350034 CNOT1A5YKK6 2376 aaKnown RBP6.15□□□□□ -1.43
TRIM55-203ENST00000350034 TRAV8-7A0A075B6U6 113 aa6.14□□□□□ -1.43
TRIM55-203ENST00000350034 A0A0B4J203 849 aa6.14□□□□□ -1.43
TRIM55-203ENST00000350034 A0A0G2JMP0 313 aa6.14□□□□□ -1.43
TRIM55-203ENST00000350034 A0A0X1KG70 313 aa6.14□□□□□ -1.43
TRIM55-203ENST00000350034 CDRT15L2A8MXV6 281 aa6.14□□□□□ -1.43
TRIM55-203ENST00000350034 STMND1H3BQB6 276 aa6.14□□□□□ -1.43
TRIM55-203ENST00000350034 LINC01387J3KSC0 135 aa6.14□□□□□ -1.43
TRIM55-203ENST00000350034 CTDSPLO15194 276 aa6.14□□□□□ -1.43
TRIM55-203ENST00000350034 TLX3O43711 291 aaPredicted RBP6.14□□□□□ -1.43
TRIM55-203ENST00000350034 NEURL1O76050 574 aa6.14□□□□□ -1.43
TRIM55-203ENST00000350034 TPPPO94811 219 aa6.14□□□□□ -1.43
TRIM55-203ENST00000350034 UBL3O95164 117 aa6.14□□□□□ -1.43
TRIM55-203ENST00000350034 CALCBP10092 127 aa6.14□□□□□ -1.43
TRIM55-203ENST00000350034 NR2C1P13056 603 aa6.14□□□□□ -1.43
TRIM55-203ENST00000350034 IGFBP3P17936 291 aaPredicted RBP6.14□□□□□ -1.43
TRIM55-203ENST00000350034 FSTP19883 344 aa6.14□□□□□ -1.43
TRIM55-203ENST00000350034 ACHEP22303 614 aa6.14□□□□□ -1.43
TRIM55-203ENST00000350034 MNDAP41218 407 aa6.14□□□□□ -1.43
TRIM55-203ENST00000350034 NR4A2P43354 598 aa6.14□□□□□ -1.43
TRIM55-203ENST00000350034 SOX2P48431 317 aa6.14□□□□□ -1.43
TRIM55-203ENST00000350034 PITPNBP48739 271 aa6.14□□□□□ -1.43
TRIM55-203ENST00000350034 GFRA1P56159 465 aa6.14□□□□□ -1.43
TRIM55-203ENST00000350034 CLDN15P56746 228 aa6.14□□□□□ -1.43
TRIM55-203ENST00000350034 CLDN17P56750 224 aa6.14□□□□□ -1.43
TRIM55-203ENST00000350034 SCAND1P57086 179 aa6.14□□□□□ -1.43
TRIM55-203ENST00000350034 CLRN1P58418 232 aa6.14□□□□□ -1.43
TRIM55-203ENST00000350034 RAC3P60763 192 aa6.14□□□□□ -1.43
TRIM55-203ENST00000350034 AIMP2Q13155 320 aaKnown RBP6.14□□□□□ -1.43
TRIM55-203ENST00000350034 CAMK2DQ13557 499 aa6.14□□□□□ -1.43
TRIM55-203ENST00000350034 IL18Q14116 193 aa6.14□□□□□ -1.43
TRIM55-203ENST00000350034 STPG1Q5TH74 334 aa6.14□□□□□ -1.43
TRIM55-203ENST00000350034 HACD4Q5VWC8 232 aa6.14□□□□□ -1.43
TRIM55-203ENST00000350034 OR7E24Q6IFN5 339 aa6.14□□□□□ -1.43
TRIM55-203ENST00000350034 FAM166AQ6J272 317 aa6.14□□□□□ -1.43
TRIM55-203ENST00000350034 ZNF544Q6NX49 715 aa6.14□□□□□ -1.43
TRIM55-203ENST00000350034 BAIAP2L2Q6UXY1 529 aa6.14□□□□□ -1.43
TRIM55-203ENST00000350034 NRARPQ7Z6K4 114 aa6.14□□□□□ -1.43
TRIM55-203ENST00000350034 YRDCQ86U90 279 aaKnown RBP6.14□□□□□ -1.43
TRIM55-203ENST00000350034 GGNQ86UU5 652 aa6.14□□□□□ -1.43
TRIM55-203ENST00000350034 LINC00346Q8IVM7 164 aa6.14□□□□□ -1.43
TRIM55-203ENST00000350034 RDH10Q8IZV5 341 aa6.14□□□□□ -1.43
TRIM55-203ENST00000350034 Q8N402 240 aa6.14□□□□□ -1.43
TRIM55-203ENST00000350034 DRAXINQ8NBI3 349 aaPredicted RBP6.14□□□□□ -1.43
TRIM55-203ENST00000350034 OR4M2Q8NGB6 313 aa6.14□□□□□ -1.43
TRIM55-203ENST00000350034 OR9K2Q8NGE7 335 aa6.14□□□□□ -1.43
TRIM55-203ENST00000350034 OR51A4Q8NGJ6 313 aa6.14□□□□□ -1.43
TRIM55-203ENST00000350034 TRIM63Q969Q1 353 aa6.14□□□□□ -1.43
TRIM55-203ENST00000350034 PPP1R14AQ96A00 147 aa6.14□□□□□ -1.43
TRIM55-203ENST00000350034 INTS12Q96CB8 462 aaKnown RBP6.14□□□□□ -1.43
TRIM55-203ENST00000350034 SLAMF6Q96DU3 332 aa6.14□□□□□ -1.43
TRIM55-203ENST00000350034 ITPKCQ96DU7 683 aa6.14□□□□□ -1.43
TRIM55-203ENST00000350034 SLC25A38Q96DW6 304 aa6.14□□□□□ -1.43
TRIM55-203ENST00000350034 ZC3HAV1LQ96H79 300 aaKnown RBP6.14□□□□□ -1.43
TRIM55-203ENST00000350034 JSRP1Q96MG2 331 aaPredicted RBP6.14□□□□□ -1.43
TRIM55-203ENST00000350034 NEDD4LQ96PU5 975 aa6.14□□□□□ -1.43
TRIM55-203ENST00000350034 OR2M2Q96R28 347 aa6.14□□□□□ -1.43
TRIM55-203ENST00000350034 UCN2Q96RP3 112 aa6.14□□□□□ -1.43
TRIM55-203ENST00000350034 ABHD1Q96SE0 405 aa6.14□□□□□ -1.43
TRIM55-203ENST00000350034 FAM173AQ9BQD7 235 aa6.14□□□□□ -1.43
TRIM55-203ENST00000350034 WACQ9BTA9 647 aa6.14□□□□□ -1.43
TRIM55-203ENST00000350034 SRXN1Q9BYN0 137 aa6.14□□□□□ -1.43
TRIM55-203ENST00000350034 SLC22A4Q9H015 551 aa6.14□□□□□ -1.43
TRIM55-203ENST00000350034 C11orf54Q9H0W9 315 aaPredicted RBP6.14□□□□□ -1.43
TRIM55-203ENST00000350034 SLITRK2Q9H156 845 aa6.14□□□□□ -1.43
TRIM55-203ENST00000350034 SLC25A18Q9H1K4 315 aa6.14□□□□□ -1.43
TRIM55-203ENST00000350034 ABCG5Q9H222 651 aa6.14□□□□□ -1.43
TRIM55-203ENST00000350034 C1orf198Q9H425 327 aa6.14□□□□□ -1.43
TRIM55-203ENST00000350034 TCF7L1Q9HCS4 588 aa6.14□□□□□ -1.43
TRIM55-203ENST00000350034 ZFP64Q9NPA5 681 aa6.14□□□□□ -1.43
TRIM55-203ENST00000350034 PNRC2Q9NPJ4 139 aaKnown RBP6.14□□□□□ -1.43
TRIM55-203ENST00000350034 FAM206AQ9NX38 181 aa6.14□□□□□ -1.43
TRIM55-203ENST00000350034 GLTPQ9NZD2 209 aa6.14□□□□□ -1.43
TRIM55-203ENST00000350034 RABL2AQ9UBK7 228 aaPredicted RBP6.14□□□□□ -1.43
TRIM55-203ENST00000350034 MALT1Q9UDY8 824 aa6.14□□□□□ -1.43
TRIM55-203ENST00000350034 FOXD3Q9UJU5 478 aaPredicted RBP6.14□□□□□ -1.43
TRIM55-203ENST00000350034 FBXL3Q9UKT7 428 aa6.14□□□□□ -1.43
TRIM55-203ENST00000350034 RABL2BQ9UNT1 228 aa6.14□□□□□ -1.43
TRIM55-203ENST00000350034 LHX6Q9UPM6 363 aa6.14□□□□□ -1.43
TRIM55-203ENST00000350034 CAMK2AQ9UQM7 478 aa6.14□□□□□ -1.43
TRIM55-203ENST00000350034 LHFPL6Q9Y693 200 aa6.14□□□□□ -1.43
TRIM55-203ENST00000350034 SDK2Q58EX2 2172 aa6.13□□□□□ -1.43
TRIM55-203ENST00000350034 ZNF726A6NNF4 738 aa6.13□□□□□ -1.43
TRIM55-203ENST00000350034 TNFSF11O14788 317 aa6.13□□□□□ -1.43
TRIM55-203ENST00000350034 SMAD9O15198 467 aaKnown RBP6.13□□□□□ -1.43
TRIM55-203ENST00000350034 GSTZ1O43708 216 aaPredicted RBP6.13□□□□□ -1.43
TRIM55-203ENST00000350034 HPNP05981 417 aa6.13□□□□□ -1.43
TRIM55-203ENST00000350034 QDPRP09417 244 aa6.13□□□□□ -1.43
TRIM55-203ENST00000350034 ENPP1P22413 925 aa6.13□□□□□ -1.43
TRIM55-203ENST00000350034 CTSSP25774 331 aa6.13□□□□□ -1.43
TRIM55-203ENST00000350034 TALDO1P37837 337 aa6.13□□□□□ -1.43
TRIM55-203ENST00000350034 MAP2K3P46734 347 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms