RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 TMEM265A0A087WTH1 108 aa12.44□□□□□ -0.42
TRIM4-201ENST00000349062 UCHL1P09936 223 aa12.44□□□□□ -0.42
TRIM4-201ENST00000349062 ANKRD34CP0C6C1 535 aa12.44□□□□□ -0.42
TRIM4-201ENST00000349062 CCL3P10147 92 aa12.44□□□□□ -0.42
TRIM4-201ENST00000349062 POU3F2P20265 443 aaPredicted RBP12.44□□□□□ -0.42
TRIM4-201ENST00000349062 CAPZA2P47755 286 aa12.44□□□□□ -0.42
TRIM4-201ENST00000349062 RIDAP52758 137 aaKnown RBP12.44□□□□□ -0.42
TRIM4-201ENST00000349062 GUCA2AQ02747 115 aa12.44□□□□□ -0.42
TRIM4-201ENST00000349062 PLA1AQ53H76 456 aa12.44□□□□□ -0.42
TRIM4-201ENST00000349062 TPRA1Q86W33 373 aa12.44□□□□□ -0.42
TRIM4-201ENST00000349062 CDC20BQ86Y33 519 aa12.44□□□□□ -0.42
TRIM4-201ENST00000349062 LRRC18Q8N456 261 aa12.44□□□□□ -0.42
TRIM4-201ENST00000349062 MEIOBQ8N635 442 aa12.44□□□□□ -0.42
TRIM4-201ENST00000349062 OR51A2Q8NGJ7 313 aa12.44□□□□□ -0.42
TRIM4-201ENST00000349062 GPR148Q8TDV2 347 aa12.44□□□□□ -0.42
TRIM4-201ENST00000349062 RBP7Q96R05 134 aa12.44□□□□□ -0.42
TRIM4-201ENST00000349062 SEC22CQ9BRL7 303 aa12.44□□□□□ -0.42
TRIM4-201ENST00000349062 ZNF69Q9UC07 566 aa12.44□□□□□ -0.42
TRIM4-201ENST00000349062 CFAP47Q6ZTR5 3102 aa12.44□□□□□ -0.42
TRIM4-201ENST00000349062 TMEM269A0A1B0GVZ9 245 aa12.44□□□□□ -0.42
TRIM4-201ENST00000349062 MS4A18H0YCH9 400 aa12.44□□□□□ -0.42
TRIM4-201ENST00000349062 SULT2B1O00204 365 aa12.44□□□□□ -0.42
TRIM4-201ENST00000349062 H2BFMP0C1H6 154 aa12.44□□□□□ -0.42
TRIM4-201ENST00000349062 GDNFP39905 211 aa12.44□□□□□ -0.42
TRIM4-201ENST00000349062 VEGFCP49767 419 aa12.44□□□□□ -0.42
TRIM4-201ENST00000349062 MS4A18Q3C1V0 323 aa12.44□□□□□ -0.42
TRIM4-201ENST00000349062 ZNF468Q5VIY5 522 aaPredicted RBP12.44□□□□□ -0.42
TRIM4-201ENST00000349062 YRDCQ86U90 279 aaKnown RBP12.44□□□□□ -0.42
TRIM4-201ENST00000349062 SLC22A8Q8TCC7 542 aa12.44□□□□□ -0.42
TRIM4-201ENST00000349062 DVL3Q92997 716 aaPredicted RBP12.44□□□□□ -0.42
TRIM4-201ENST00000349062 DDIT4LQ96D03 193 aa12.44□□□□□ -0.42
TRIM4-201ENST00000349062 NARS2Q96I59 477 aaKnown RBP12.44□□□□□ -0.42
TRIM4-201ENST00000349062 GPR137Q96N19 417 aa12.44□□□□□ -0.42
TRIM4-201ENST00000349062 GSX2Q9BZM3 304 aa12.44□□□□□ -0.42
TRIM4-201ENST00000349062 MOKQ9UQ07 419 aa12.44□□□□□ -0.42
TRIM4-201ENST00000349062 DHDHQ9UQ10 334 aa12.44□□□□□ -0.42
TRIM4-201ENST00000349062 LRP12Q9Y561 859 aa12.44□□□□□ -0.42
TRIM4-201ENST00000349062 L7N2F9 121 aa12.44□□□□□ -0.42
TRIM4-201ENST00000349062 WDPCPO95876 746 aa12.44□□□□□ -0.42
TRIM4-201ENST00000349062 APOC3P02656 99 aa12.44□□□□□ -0.42
TRIM4-201ENST00000349062 CDK2P24941 298 aa12.44□□□□□ -0.42
TRIM4-201ENST00000349062 KIR3DL2P43630 455 aa12.44□□□□□ -0.42
TRIM4-201ENST00000349062 EFNB2P52799 333 aa12.44□□□□□ -0.42
TRIM4-201ENST00000349062 MFSD13AQ14CX5 517 aa12.44□□□□□ -0.42
TRIM4-201ENST00000349062 SFRP5Q5T4F7 317 aa12.44□□□□□ -0.42
TRIM4-201ENST00000349062 MAMSTRQ6ZN01 415 aa12.44□□□□□ -0.42
TRIM4-201ENST00000349062 SFXN2Q96NB2 322 aa12.44□□□□□ -0.42
TRIM4-201ENST00000349062 MICU1Q9BPX6 476 aa12.44□□□□□ -0.42
TRIM4-201ENST00000349062 GHITMQ9H3K2 345 aa12.44□□□□□ -0.42
TRIM4-201ENST00000349062 TAS2R4Q9NYW5 299 aa12.44□□□□□ -0.42
TRIM4-201ENST00000349062 MGAT4CQ9UBM8 478 aa12.44□□□□□ -0.42
TRIM4-201ENST00000349062 TRAV18A0A075B6X5 111 aa12.43□□□□□ -0.42
TRIM4-201ENST00000349062 NSG1A0A0A6YYJ2 146 aa12.43□□□□□ -0.42
TRIM4-201ENST00000349062 LINC00862A6NCI5 91 aa12.43□□□□□ -0.42
TRIM4-201ENST00000349062 NUP62P37198 522 aaPredicted RBP12.43□□□□□ -0.42
TRIM4-201ENST00000349062 TUSC1Q2TAM9 212 aa12.43□□□□□ -0.42
TRIM4-201ENST00000349062 PYHIN1Q6K0P9 492 aa12.43□□□□□ -0.42
TRIM4-201ENST00000349062 KCTD20Q7Z5Y7 419 aa12.43□□□□□ -0.42
TRIM4-201ENST00000349062 ZNF441Q8N8Z8 693 aa12.43□□□□□ -0.42
TRIM4-201ENST00000349062 OR13C3Q8NGS6 347 aa12.43□□□□□ -0.42
TRIM4-201ENST00000349062 SPACA9Q96E40 222 aaPredicted RBP12.43□□□□□ -0.42
TRIM4-201ENST00000349062 SLC25A44Q96H78 314 aaPredicted RBP12.43□□□□□ -0.42
TRIM4-201ENST00000349062 OR5V1Q9UGF6 321 aa12.43□□□□□ -0.42
TRIM4-201ENST00000349062 WIF1Q9Y5W5 379 aa12.43□□□□□ -0.42
TRIM4-201ENST00000349062 MED13Q9UHV7 2174 aa12.43□□□□□ -0.42
TRIM4-201ENST00000349062 SIX6O95475 246 aa12.43□□□□□ -0.42
TRIM4-201ENST00000349062 JMJD7P0C870 316 aa12.43□□□□□ -0.42
TRIM4-201ENST00000349062 ZXDAP98168 799 aa12.43□□□□□ -0.42
TRIM4-201ENST00000349062 GGTLC2Q14390 218 aa12.43□□□□□ -0.42
TRIM4-201ENST00000349062 SLC17A1Q14916 467 aa12.43□□□□□ -0.42
TRIM4-201ENST00000349062 ST8SIA4Q92187 359 aa12.43□□□□□ -0.42
TRIM4-201ENST00000349062 S100A16Q96FQ6 103 aaKnown RBP12.43□□□□□ -0.42
TRIM4-201ENST00000349062 JAM3Q9BX67 310 aa12.43□□□□□ -0.42
TRIM4-201ENST00000349062 CHRNA10Q9GZZ6 450 aa12.43□□□□□ -0.42
TRIM4-201ENST00000349062 SERINC1Q9NRX5 453 aa12.43□□□□□ -0.42
TRIM4-201ENST00000349062 OR6C76A6NM76 312 aa12.43□□□□□ -0.42
TRIM4-201ENST00000349062 OR4C45A6NMZ5 311 aa12.43□□□□□ -0.42
TRIM4-201ENST00000349062 TO15178 435 aa12.43□□□□□ -0.42
TRIM4-201ENST00000349062 GMDSO60547 372 aa12.43□□□□□ -0.42
TRIM4-201ENST00000349062 RLN1P04808 185 aa12.43□□□□□ -0.42
TRIM4-201ENST00000349062 ZNF43P17038 809 aa12.43□□□□□ -0.42
TRIM4-201ENST00000349062 DCTDP32321 178 aa12.43□□□□□ -0.42
TRIM4-201ENST00000349062 STARP49675 285 aa12.43□□□□□ -0.42
TRIM4-201ENST00000349062 SLC25A1P53007 311 aa12.43□□□□□ -0.42
TRIM4-201ENST00000349062 BTG1P62324 171 aa12.43□□□□□ -0.42
TRIM4-201ENST00000349062 TMEM81Q6P7N7 255 aa12.43□□□□□ -0.42
TRIM4-201ENST00000349062 UEVLDQ8IX04 471 aa12.43□□□□□ -0.42
TRIM4-201ENST00000349062 OR6N1Q8NGY5 312 aa12.43□□□□□ -0.42
TRIM4-201ENST00000349062 FBXW5Q969U6 566 aa12.43□□□□□ -0.42
TRIM4-201ENST00000349062 WDR89Q96FK6 387 aaPredicted RBP12.43□□□□□ -0.42
TRIM4-201ENST00000349062 FAM71F1Q96KD3 344 aaPredicted RBP12.43□□□□□ -0.42
TRIM4-201ENST00000349062 GPX7Q96SL4 187 aaPredicted RBP12.43□□□□□ -0.42
TRIM4-201ENST00000349062 ATG5Q9H1Y0 275 aa12.43□□□□□ -0.42
TRIM4-201ENST00000349062 TMEM14AQ9Y6G1 99 aa12.43□□□□□ -0.42
TRIM4-201ENST00000349062 FXYD6-FXYD2A0A087WZ82 144 aa12.42□□□□□ -0.42
TRIM4-201ENST00000349062 ANKUB1A6NFN9 424 aa12.42□□□□□ -0.42
TRIM4-201ENST00000349062 ARPC1BO15143 372 aaKnown RBP12.42□□□□□ -0.42
TRIM4-201ENST00000349062 ARPC5O15511 151 aa12.42□□□□□ -0.42
TRIM4-201ENST00000349062 LDOC1O95751 146 aaPredicted RBP12.42□□□□□ -0.42
TRIM4-201ENST00000349062 MT-ATP6P00846 226 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms