RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 GASTP01350 101 aa13.55□□□□□ -0.24
TSPAN4-201ENST00000346501 IFNGP01579 166 aa13.55□□□□□ -0.24
TSPAN4-201ENST00000346501 ZNF250P15622 560 aa13.55□□□□□ -0.24
TSPAN4-201ENST00000346501 HIST1H1CP16403 213 aaKnown RBP13.55□□□□□ -0.24
TSPAN4-201ENST00000346501 ALDH3B1P43353 468 aa13.55□□□□□ -0.24
TSPAN4-201ENST00000346501 LOXL1Q08397 574 aaPredicted RBP13.55□□□□□ -0.24
TSPAN4-201ENST00000346501 COX10Q12887 443 aa13.55□□□□□ -0.24
TSPAN4-201ENST00000346501 SLC35F1Q5T1Q4 408 aa13.55□□□□□ -0.24
TSPAN4-201ENST00000346501 PAQR4Q8N4S7 273 aaPredicted RBP13.55□□□□□ -0.24
TSPAN4-201ENST00000346501 MAPK1IP1LQ8NDC0 245 aa13.55□□□□□ -0.24
TSPAN4-201ENST00000346501 GJC3Q8NFK1 279 aa13.55□□□□□ -0.24
TSPAN4-201ENST00000346501 OR10G2Q8NGC3 310 aa13.55□□□□□ -0.24
TSPAN4-201ENST00000346501 OR4C15Q8NGM1 316 aa13.55□□□□□ -0.24
TSPAN4-201ENST00000346501 ABHD4Q8TB40 342 aa13.55□□□□□ -0.24
TSPAN4-201ENST00000346501 CANT1Q8WVQ1 401 aa13.55□□□□□ -0.24
TSPAN4-201ENST00000346501 IPCEF1Q8WWN9 437 aaPredicted RBP13.55□□□□□ -0.24
TSPAN4-201ENST00000346501 C4orf45Q96LM5 186 aa13.55□□□□□ -0.24
TSPAN4-201ENST00000346501 FOXN4Q96NZ1 517 aa13.55□□□□□ -0.24
TSPAN4-201ENST00000346501 RACGAP1Q9H0H5 632 aa13.55□□□□□ -0.24
TSPAN4-201ENST00000346501 HINT3Q9NQE9 182 aaKnown RBP13.55□□□□□ -0.24
TSPAN4-201ENST00000346501 RPRD1BQ9NQG5 326 aaKnown RBP13.55□□□□□ -0.24
TSPAN4-201ENST00000346501 IL20Q9NYY1 176 aa13.55□□□□□ -0.24
TSPAN4-201ENST00000346501 ASH2LQ9UBL3 628 aa13.55□□□□□ -0.24
TSPAN4-201ENST00000346501 B9D1Q9UPM9 204 aa13.55□□□□□ -0.24
TSPAN4-201ENST00000346501 LOC100509620A0A075B734 347 aa13.54□□□□□ -0.24
TSPAN4-201ENST00000346501 H3BSA7 217 aa13.54□□□□□ -0.24
TSPAN4-201ENST00000346501 TPD52L2O43399 206 aaKnown RBP13.54□□□□□ -0.24
TSPAN4-201ENST00000346501 TLX2O43763 284 aaPredicted RBP13.54□□□□□ -0.24
TSPAN4-201ENST00000346501 ZNF823P16415 610 aa13.54□□□□□ -0.24
TSPAN4-201ENST00000346501 LIPAP38571 399 aa13.54□□□□□ -0.24
TSPAN4-201ENST00000346501 PPP1CBP62140 327 aa13.54□□□□□ -0.24
TSPAN4-201ENST00000346501 TEKQ02763 1124 aa13.54□□□□□ -0.24
TSPAN4-201ENST00000346501 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.54□□□□□ -0.24
TSPAN4-201ENST00000346501 PPP1R8Q12972 351 aaKnown RBP13.54□□□□□ -0.24
TSPAN4-201ENST00000346501 BNIP1Q12981 228 aa13.54□□□□□ -0.24
TSPAN4-201ENST00000346501 GGTLC2Q14390 218 aa13.54□□□□□ -0.24
TSPAN4-201ENST00000346501 KCNMB1Q16558 191 aa13.54□□□□□ -0.24
TSPAN4-201ENST00000346501 PCGF3Q3KNV8 242 aa13.54□□□□□ -0.24
TSPAN4-201ENST00000346501 ZMAT1Q5H9K5 638 aa13.54□□□□□ -0.24
TSPAN4-201ENST00000346501 UGT2A3Q6UWM9 527 aa13.54□□□□□ -0.24
TSPAN4-201ENST00000346501 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.54□□□□□ -0.24
TSPAN4-201ENST00000346501 ADGRG5Q8IZF4 528 aa13.54□□□□□ -0.24
TSPAN4-201ENST00000346501 ZNF786Q8N393 782 aa13.54□□□□□ -0.24
TSPAN4-201ENST00000346501 NPEPL1Q8NDH3 523 aa13.54□□□□□ -0.24
TSPAN4-201ENST00000346501 SDR9C7Q8NEX9 313 aa13.54□□□□□ -0.24
TSPAN4-201ENST00000346501 OR2T33Q8NG76 320 aa13.54□□□□□ -0.24
TSPAN4-201ENST00000346501 OR2T4Q8NH00 348 aa13.54□□□□□ -0.24
TSPAN4-201ENST00000346501 TEX47Q8TBZ9 253 aa13.54□□□□□ -0.24
TSPAN4-201ENST00000346501 SLC7A6OSQ96CW6 309 aaPredicted RBP13.54□□□□□ -0.24
TSPAN4-201ENST00000346501 TSSK6Q9BXA6 273 aa13.54□□□□□ -0.24
TSPAN4-201ENST00000346501 TEX12Q9BXU0 123 aa13.54□□□□□ -0.24
TSPAN4-201ENST00000346501 DGCR6LQ9BY27 220 aa13.54□□□□□ -0.24
TSPAN4-201ENST00000346501 MMADHCQ9H3L0 296 aaPredicted RBP13.54□□□□□ -0.24
TSPAN4-201ENST00000346501 EGLN3Q9H6Z9 239 aa13.54□□□□□ -0.24
TSPAN4-201ENST00000346501 CYSLTR2Q9NS75 346 aa13.54□□□□□ -0.24
TSPAN4-201ENST00000346501 CGGBP1Q9UFW8 167 aaPredicted RBP13.54□□□□□ -0.24
TSPAN4-201ENST00000346501 ATPIF1Q9UII2 106 aa13.54□□□□□ -0.24
TSPAN4-201ENST00000346501 KLHL21Q9UJP4 597 aa13.54□□□□□ -0.24
TSPAN4-201ENST00000346501 IGLV3-9A0A075B6K5 115 aa13.53□□□□□ -0.24
TSPAN4-201ENST00000346501 OR6C6A6NF89 314 aa13.53□□□□□ -0.24
TSPAN4-201ENST00000346501 H3BN98 237 aa13.53□□□□□ -0.24
TSPAN4-201ENST00000346501 NR4A2P43354 598 aa13.53□□□□□ -0.24
TSPAN4-201ENST00000346501 RGS6P49758 472 aa13.53□□□□□ -0.24
TSPAN4-201ENST00000346501 MAD2L1BPQ15013 274 aaPredicted RBP13.53□□□□□ -0.24
TSPAN4-201ENST00000346501 LRP11Q86VZ4 500 aa13.53□□□□□ -0.24
TSPAN4-201ENST00000346501 ZCCHC24Q8N2G6 241 aaKnown RBP13.53□□□□□ -0.24
TSPAN4-201ENST00000346501 PROKR2Q8NFJ6 384 aa13.53□□□□□ -0.24
TSPAN4-201ENST00000346501 OR5L1Q8NGL2 311 aa13.53□□□□□ -0.24
TSPAN4-201ENST00000346501 RDH5Q92781 318 aa13.53□□□□□ -0.24
TSPAN4-201ENST00000346501 TSSK2Q96PF2 358 aa13.53□□□□□ -0.24
TSPAN4-201ENST00000346501 DCLRE1CQ96SD1 692 aaKnown RBP13.53□□□□□ -0.24
TSPAN4-201ENST00000346501 HDHD2Q9H0R4 259 aa13.53□□□□□ -0.24
TSPAN4-201ENST00000346501 DECR2Q9NUI1 292 aa13.53□□□□□ -0.24
TSPAN4-201ENST00000346501 TBCCD1Q9NVR7 557 aa13.53□□□□□ -0.24
TSPAN4-201ENST00000346501 KCNG2Q9UJ96 466 aa13.53□□□□□ -0.24
TSPAN4-201ENST00000346501 POMPQ9Y244 141 aa13.53□□□□□ -0.24
TSPAN4-201ENST00000346501 GRIP1Q9Y3R0 1128 aa13.53□□□□□ -0.24
TSPAN4-201ENST00000346501 HIVEP2P31629 2446 aa13.53□□□□□ -0.24
TSPAN4-201ENST00000346501 ARRDC5A6NEK1 342 aa13.52□□□□□ -0.25
TSPAN4-201ENST00000346501 RIIAD1A6NNX1 92 aa13.52□□□□□ -0.25
TSPAN4-201ENST00000346501 C17orf100A8MU93 164 aa13.52□□□□□ -0.25
TSPAN4-201ENST00000346501 GSC2O15499 205 aa13.52□□□□□ -0.25
TSPAN4-201ENST00000346501 CD5LO43866 347 aa13.52□□□□□ -0.25
TSPAN4-201ENST00000346501 IGHV3-13P01766 116 aa13.52□□□□□ -0.25
TSPAN4-201ENST00000346501 GZMKP49863 264 aa13.52□□□□□ -0.25
TSPAN4-201ENST00000346501 ERVS71-1P61550 626 aa13.52□□□□□ -0.25
TSPAN4-201ENST00000346501 CBX1P83916 185 aa13.52□□□□□ -0.25
TSPAN4-201ENST00000346501 ALKBH6Q3KRA9 238 aa13.52□□□□□ -0.25
TSPAN4-201ENST00000346501 FAM209AQ5JX71 171 aa13.52□□□□□ -0.25
TSPAN4-201ENST00000346501 ZNF770Q6IQ21 691 aaPredicted RBP13.52□□□□□ -0.25
TSPAN4-201ENST00000346501 VASH1Q7L8A9 365 aaPredicted RBP13.52□□□□□ -0.25
TSPAN4-201ENST00000346501 OR6V1Q8N148 313 aa13.52□□□□□ -0.25
TSPAN4-201ENST00000346501 LNX2Q8N448 690 aa13.52□□□□□ -0.25
TSPAN4-201ENST00000346501 OR1F12Q8NHA8 337 aa13.52□□□□□ -0.25
TSPAN4-201ENST00000346501 SLC25A40Q8TBP6 338 aa13.52□□□□□ -0.25
TSPAN4-201ENST00000346501 YAE1D1Q9NRH1 226 aa13.52□□□□□ -0.25
TSPAN4-201ENST00000346501 PDP1Q9P0J1 537 aaPredicted RBP13.52□□□□□ -0.25
TSPAN4-201ENST00000346501 IGLV1-36A0A0B4J1U3 117 aa13.51□□□□□ -0.25
TSPAN4-201ENST00000346501 J3QW42 95 aa13.51□□□□□ -0.25
TSPAN4-201ENST00000346501 BHLHE40O14503 412 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms