RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 ACER2Q5QJU3 275 aa8.23□□□□□ -1.09
ATG4A-202ENST00000345734 LIPNQ5VXI9 398 aa8.23□□□□□ -1.09
ATG4A-202ENST00000345734 STEAP3Q658P3 488 aa8.23□□□□□ -1.09
ATG4A-202ENST00000345734 TIGD3Q6B0B8 471 aa8.23□□□□□ -1.09
ATG4A-202ENST00000345734 H3F3CQ6NXT2 135 aa8.23□□□□□ -1.09
ATG4A-202ENST00000345734 ZNF704Q6ZNC4 412 aaPredicted RBP8.23□□□□□ -1.09
ATG4A-202ENST00000345734 PIP4P1Q86T03 277 aa8.23□□□□□ -1.09
ATG4A-202ENST00000345734 LYSMD2Q8IV50 215 aa8.23□□□□□ -1.09
ATG4A-202ENST00000345734 DND1Q8IYX4 353 aaKnown RBP8.23□□□□□ -1.09
ATG4A-202ENST00000345734 GTPBP8Q8N3Z3 284 aaPredicted RBP8.23□□□□□ -1.09
ATG4A-202ENST00000345734 MS4A15Q8N5U1 240 aa8.23□□□□□ -1.09
ATG4A-202ENST00000345734 YIPF7Q8N8F6 280 aa8.23□□□□□ -1.09
ATG4A-202ENST00000345734 DEFB124Q8NES8 71 aa8.23□□□□□ -1.09
ATG4A-202ENST00000345734 PSMF1Q92530 271 aa8.23□□□□□ -1.09
ATG4A-202ENST00000345734 WDFY2Q96P53 400 aa8.23□□□□□ -1.09
ATG4A-202ENST00000345734 SLCO1C1Q9NYB5 712 aa8.23□□□□□ -1.09
ATG4A-202ENST00000345734 NPAP1Q9NZP6 1156 aa8.23□□□□□ -1.09
ATG4A-202ENST00000345734 MBD2Q9UBB5 411 aa8.23□□□□□ -1.09
ATG4A-202ENST00000345734 IKZF2Q9UKS7 526 aa8.23□□□□□ -1.09
ATG4A-202ENST00000345734 LOC400499M0QZD8 3231 aa8.23□□□□□ -1.09
ATG4A-202ENST00000345734 A0A087WZY1 265 aa8.23□□□□□ -1.09
ATG4A-202ENST00000345734 A0A1W2PNV4 684 aa8.23□□□□□ -1.09
ATG4A-202ENST00000345734 C1QTNF9BB2RNN3 333 aa8.23□□□□□ -1.09
ATG4A-202ENST00000345734 HPGDSO60760 199 aa8.23□□□□□ -1.09
ATG4A-202ENST00000345734 FZD7O75084 574 aa8.23□□□□□ -1.09
ATG4A-202ENST00000345734 ECDO95905 644 aaPredicted RBP8.23□□□□□ -1.09
ATG4A-202ENST00000345734 SPARCP09486 303 aa8.23□□□□□ -1.09
ATG4A-202ENST00000345734 DAP3P51398 398 aaKnown RBP8.23□□□□□ -1.09
ATG4A-202ENST00000345734 BIDP55957 195 aa8.23□□□□□ -1.09
ATG4A-202ENST00000345734 MRPS15P82914 257 aaKnown RBP8.23□□□□□ -1.09
ATG4A-202ENST00000345734 DDI2Q5TDH0 399 aa8.23□□□□□ -1.09
ATG4A-202ENST00000345734 METTL11BQ5VVY1 283 aa8.23□□□□□ -1.09
ATG4A-202ENST00000345734 RAET1LQ5VY80 246 aa8.23□□□□□ -1.09
ATG4A-202ENST00000345734 NHLRC1Q6VVB1 395 aa8.23□□□□□ -1.09
ATG4A-202ENST00000345734 FAM220AQ7Z4H9 259 aa8.23□□□□□ -1.09
ATG4A-202ENST00000345734 GPAT4Q86UL3 456 aa8.23□□□□□ -1.09
ATG4A-202ENST00000345734 BEST3Q8N1M1 668 aa8.23□□□□□ -1.09
ATG4A-202ENST00000345734 OTOSQ8NHW6 89 aa8.23□□□□□ -1.09
ATG4A-202ENST00000345734 RPS4Y2Q8TD47 263 aa8.23□□□□□ -1.09
ATG4A-202ENST00000345734 RGP1Q92546 391 aaPredicted RBP8.23□□□□□ -1.09
ATG4A-202ENST00000345734 AP3S1Q92572 193 aa8.23□□□□□ -1.09
ATG4A-202ENST00000345734 ORAI1Q96D31 301 aa8.23□□□□□ -1.09
ATG4A-202ENST00000345734 THOC3Q96J01 351 aaKnown RBP8.23□□□□□ -1.09
ATG4A-202ENST00000345734 CCDC140Q96MF4 163 aa8.23□□□□□ -1.09
ATG4A-202ENST00000345734 OR14A2Q96R54 314 aa8.23□□□□□ -1.09
ATG4A-202ENST00000345734 SSBP4Q9BWG4 385 aaPredicted RBP8.23□□□□□ -1.09
ATG4A-202ENST00000345734 GPR87Q9BY21 358 aa8.23□□□□□ -1.09
ATG4A-202ENST00000345734 C14orf119Q9NWQ9 140 aa8.23□□□□□ -1.09
ATG4A-202ENST00000345734 IL17BQ9UHF5 180 aa8.23□□□□□ -1.09
ATG4A-202ENST00000345734 DKKL1Q9UK85 242 aa8.23□□□□□ -1.09
ATG4A-202ENST00000345734 ZFHX2Q9C0A1 2572 aaPredicted RBP8.22□□□□□ -1.09
ATG4A-202ENST00000345734 A6NIZ1 184 aa8.22□□□□□ -1.09
ATG4A-202ENST00000345734 ZFPL1O95159 310 aa8.22□□□□□ -1.09
ATG4A-202ENST00000345734 WNT11O96014 354 aa8.22□□□□□ -1.09
ATG4A-202ENST00000345734 KRT8P05787 483 aa8.22□□□□□ -1.09
ATG4A-202ENST00000345734 AZGP1P25311 298 aaKnown RBP8.22□□□□□ -1.09
ATG4A-202ENST00000345734 DSCR4P56555 118 aaPredicted RBP8.22□□□□□ -1.09
ATG4A-202ENST00000345734 RAP1BP61224 184 aa8.22□□□□□ -1.09
ATG4A-202ENST00000345734 RAP1AP62834 184 aa8.22□□□□□ -1.09
ATG4A-202ENST00000345734 GALK2Q01415 458 aa8.22□□□□□ -1.09
ATG4A-202ENST00000345734 CDK10Q15131 360 aa8.22□□□□□ -1.09
ATG4A-202ENST00000345734 ZNF79Q15937 498 aa8.22□□□□□ -1.09
ATG4A-202ENST00000345734 ZNF181Q2M3W8 571 aa8.22□□□□□ -1.09
ATG4A-202ENST00000345734 IDNKQ5T6J7 187 aa8.22□□□□□ -1.09
ATG4A-202ENST00000345734 HDDC2Q7Z4H3 204 aa8.22□□□□□ -1.09
ATG4A-202ENST00000345734 SLC22A16Q86VW1 577 aa8.22□□□□□ -1.09
ATG4A-202ENST00000345734 DIRAS2Q96HU8 199 aa8.22□□□□□ -1.09
ATG4A-202ENST00000345734 SGCZQ96LD1 299 aa8.22□□□□□ -1.09
ATG4A-202ENST00000345734 FANCFQ9NPI8 374 aa8.22□□□□□ -1.09
ATG4A-202ENST00000345734 CFAP47Q6ZTR5 3102 aa8.22□□□□□ -1.09
ATG4A-202ENST00000345734 A0A0G2JK05 382 aa8.21□□□□□ -1.09
ATG4A-202ENST00000345734 SPAARA0A1B0GVQ0 90 aa8.21□□□□□ -1.09
ATG4A-202ENST00000345734 OR2M5A3KFT3 312 aa8.21□□□□□ -1.09
ATG4A-202ENST00000345734 NPIPB13A6NJU9 1138 aa8.21□□□□□ -1.09
ATG4A-202ENST00000345734 A6NL46 340 aa8.21□□□□□ -1.09
ATG4A-202ENST00000345734 C21orf140B9A014 251 aa8.21□□□□□ -1.09
ATG4A-202ENST00000345734 NPIPB4C9JG80 1138 aa8.21□□□□□ -1.09
ATG4A-202ENST00000345734 SULT2B1O00204 365 aa8.21□□□□□ -1.09
ATG4A-202ENST00000345734 P04436 131 aa8.21□□□□□ -1.09
ATG4A-202ENST00000345734 CD1AP06126 327 aa8.21□□□□□ -1.09
ATG4A-202ENST00000345734 TACSTD2P09758 323 aa8.21□□□□□ -1.09
ATG4A-202ENST00000345734 MYL9P24844 172 aa8.21□□□□□ -1.09
ATG4A-202ENST00000345734 CRABP1P29762 137 aa8.21□□□□□ -1.09
ATG4A-202ENST00000345734 TALDO1P37837 337 aa8.21□□□□□ -1.09
ATG4A-202ENST00000345734 OR3A3P47888 321 aa8.21□□□□□ -1.09
ATG4A-202ENST00000345734 GPR85P60893 370 aa8.21□□□□□ -1.09
ATG4A-202ENST00000345734 SSTP61278 116 aa8.21□□□□□ -1.09
ATG4A-202ENST00000345734 ADAM8P78325 824 aa8.21□□□□□ -1.09
ATG4A-202ENST00000345734 EGR3Q06889 387 aa8.21□□□□□ -1.09
ATG4A-202ENST00000345734 TCF15Q12870 199 aa8.21□□□□□ -1.09
ATG4A-202ENST00000345734 CAMK2DQ13557 499 aa8.21□□□□□ -1.09
ATG4A-202ENST00000345734 TOMM20Q15388 145 aa8.21□□□□□ -1.09
ATG4A-202ENST00000345734 NKPD1Q17RQ9 610 aa8.21□□□□□ -1.09
ATG4A-202ENST00000345734 SLC25A35Q3KQZ1 300 aa8.21□□□□□ -1.09
ATG4A-202ENST00000345734 STPG1Q5TH74 334 aa8.21□□□□□ -1.09
ATG4A-202ENST00000345734 LRRN1Q6UXK5 716 aa8.21□□□□□ -1.09
ATG4A-202ENST00000345734 TMPPEQ6ZT21 453 aa8.21□□□□□ -1.09
ATG4A-202ENST00000345734 UEVLDQ8IX04 471 aa8.21□□□□□ -1.09
ATG4A-202ENST00000345734 LINC00518Q8N0U6 118 aa8.21□□□□□ -1.09
ATG4A-202ENST00000345734 SLC25A43Q8WUT9 341 aaPredicted RBP8.21□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms