RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 NDRG4Q9ULP0 352 aaKnown RBP10.29□□□□□ -0.76
SNCA-202ENST00000345009 ATP23Q9Y6H3 246 aa10.29□□□□□ -0.76
SNCA-202ENST00000345009 SGCEO43556 437 aa10.28□□□□□ -0.76
SNCA-202ENST00000345009 MPZL2O60487 215 aa10.28□□□□□ -0.76
SNCA-202ENST00000345009 GLCEO94923 617 aa10.28□□□□□ -0.76
SNCA-202ENST00000345009 MPZL1O95297 269 aa10.28□□□□□ -0.76
SNCA-202ENST00000345009 MMP7P09237 267 aaPredicted RBP10.28□□□□□ -0.76
SNCA-202ENST00000345009 GAAP10253 952 aa10.28□□□□□ -0.76
SNCA-202ENST00000345009 COX5BP10606 129 aa10.28□□□□□ -0.76
SNCA-202ENST00000345009 ZNF14P17017 642 aaPredicted RBP10.28□□□□□ -0.76
SNCA-202ENST00000345009 STOMP27105 288 aa10.28□□□□□ -0.76
SNCA-202ENST00000345009 EPHA2P29317 976 aa10.28□□□□□ -0.76
SNCA-202ENST00000345009 GSTT1P30711 240 aa10.28□□□□□ -0.76
SNCA-202ENST00000345009 GDI2P50395 445 aaKnown RBP10.28□□□□□ -0.76
SNCA-202ENST00000345009 PSG4Q00888 419 aa10.28□□□□□ -0.76
SNCA-202ENST00000345009 ECH1Q13011 328 aa10.28□□□□□ -0.76
SNCA-202ENST00000345009 ENDOGQ14249 297 aaKnown RBP10.28□□□□□ -0.76
SNCA-202ENST00000345009 ZIK1Q3SY52 487 aaPredicted RBP10.28□□□□□ -0.76
SNCA-202ENST00000345009 LCN1P1Q5VSP4 162 aa10.28□□□□□ -0.76
SNCA-202ENST00000345009 C12orf73Q69YU5 71 aa10.28□□□□□ -0.76
SNCA-202ENST00000345009 C20orf204Q6ZNR8 217 aa10.28□□□□□ -0.76
SNCA-202ENST00000345009 GID4Q8IVV7 300 aa10.28□□□□□ -0.76
SNCA-202ENST00000345009 C1orf174Q8IYL3 243 aa10.28□□□□□ -0.76
SNCA-202ENST00000345009 GALNT4Q8N4A0 578 aa10.28□□□□□ -0.76
SNCA-202ENST00000345009 OR51L1Q8NGJ5 315 aa10.28□□□□□ -0.76
SNCA-202ENST00000345009 TMEM163Q8TC26 289 aa10.28□□□□□ -0.76
SNCA-202ENST00000345009 AKAP1Q92667 903 aaKnown RBP eCLIP10.28□□□□□ -0.76
SNCA-202ENST00000345009 HTRA1Q92743 480 aa10.28□□□□□ -0.76
SNCA-202ENST00000345009 RFKQ969G6 155 aa10.28□□□□□ -0.76
SNCA-202ENST00000345009 HRASLS5Q96KN8 279 aa10.28□□□□□ -0.76
SNCA-202ENST00000345009 IL4I1Q96RQ9 567 aa10.28□□□□□ -0.76
SNCA-202ENST00000345009 SLC29A1Q99808 456 aa10.28□□□□□ -0.76
SNCA-202ENST00000345009 TOR3AQ9H497 397 aa10.28□□□□□ -0.76
SNCA-202ENST00000345009 RNPEPL1Q9HAU8 725 aa10.28□□□□□ -0.76
SNCA-202ENST00000345009 PLEK2Q9NYT0 353 aa10.28□□□□□ -0.76
SNCA-202ENST00000345009 CISD1Q9NZ45 108 aaKnown RBP10.28□□□□□ -0.76
SNCA-202ENST00000345009 ZNF224Q9NZL3 707 aa10.28□□□□□ -0.76
SNCA-202ENST00000345009 ASH2LQ9UBL3 628 aa10.28□□□□□ -0.76
SNCA-202ENST00000345009 GMPPBQ9Y5P6 360 aa10.28□□□□□ -0.76
SNCA-202ENST00000345009 ZNF503-AS2A6NEH8 195 aa10.27□□□□□ -0.77
SNCA-202ENST00000345009 SLC22A31A6NKX4 558 aa10.27□□□□□ -0.77
SNCA-202ENST00000345009 ZNF593O00488 134 aaPredicted RBP10.27□□□□□ -0.77
SNCA-202ENST00000345009 HS3ST1O14792 307 aa10.27□□□□□ -0.77
SNCA-202ENST00000345009 CASQ2O14958 399 aaPredicted RBP10.27□□□□□ -0.77
SNCA-202ENST00000345009 SNAP29O95721 258 aa10.27□□□□□ -0.77
SNCA-202ENST00000345009 TFP02787 698 aa10.27□□□□□ -0.77
SNCA-202ENST00000345009 GYPBP06028 91 aa10.27□□□□□ -0.77
SNCA-202ENST00000345009 BMP4P12644 408 aa10.27□□□□□ -0.77
SNCA-202ENST00000345009 PRF1P14222 555 aa10.27□□□□□ -0.77
SNCA-202ENST00000345009 LOXP28300 417 aaPredicted RBP10.27□□□□□ -0.77
SNCA-202ENST00000345009 GGT2P36268 569 aa10.27□□□□□ -0.77
SNCA-202ENST00000345009 POLR2IP36954 125 aaKnown RBP10.27□□□□□ -0.77
SNCA-202ENST00000345009 RAD52P43351 418 aa10.27□□□□□ -0.77
SNCA-202ENST00000345009 ENTPD1P49961 510 aa10.27□□□□□ -0.77
SNCA-202ENST00000345009 CDH11P55287 796 aa10.27□□□□□ -0.77
SNCA-202ENST00000345009 RPS23P62266 143 aaKnown RBP10.27□□□□□ -0.77
SNCA-202ENST00000345009 RIPK1Q13546 671 aa10.27□□□□□ -0.77
SNCA-202ENST00000345009 ZNF672Q499Z4 452 aaPredicted RBP10.27□□□□□ -0.77
SNCA-202ENST00000345009 TEX30Q5JUR7 227 aa10.27□□□□□ -0.77
SNCA-202ENST00000345009 NXNL2Q5VZ03 156 aa10.27□□□□□ -0.77
SNCA-202ENST00000345009 TTC23Q5W5X9 447 aa10.27□□□□□ -0.77
SNCA-202ENST00000345009 LPCAT4Q643R3 524 aa10.27□□□□□ -0.77
SNCA-202ENST00000345009 UGT2A3Q6UWM9 527 aa10.27□□□□□ -0.77
SNCA-202ENST00000345009 SHFQ7M4L6 423 aa10.27□□□□□ -0.77
SNCA-202ENST00000345009 FGFBP3Q8TAT2 258 aa10.27□□□□□ -0.77
SNCA-202ENST00000345009 FAM81AQ8TBF8 368 aa10.27□□□□□ -0.77
SNCA-202ENST00000345009 FBXW5Q969U6 566 aa10.27□□□□□ -0.77
SNCA-202ENST00000345009 INTS14Q96SY0 518 aa10.27□□□□□ -0.77
SNCA-202ENST00000345009 PITX2Q99697 317 aa10.27□□□□□ -0.77
SNCA-202ENST00000345009 APOL4Q9BPW4 351 aa10.27□□□□□ -0.77
SNCA-202ENST00000345009 HDHD2Q9H0R4 259 aa10.27□□□□□ -0.77
SNCA-202ENST00000345009 MED20Q9H944 212 aa10.27□□□□□ -0.77
SNCA-202ENST00000345009 UBTD1Q9HAC8 227 aa10.27□□□□□ -0.77
SNCA-202ENST00000345009 HINT3Q9NQE9 182 aaKnown RBP10.27□□□□□ -0.77
SNCA-202ENST00000345009 CYB5R1Q9UHQ9 305 aa10.27□□□□□ -0.77
SNCA-202ENST00000345009 ATPIF1Q9UII2 106 aa10.27□□□□□ -0.77
SNCA-202ENST00000345009 POLQO75417 2590 aa10.27□□□□□ -0.77
SNCA-202ENST00000345009 IGHV2OR16-5A0A0B4J2B6 119 aa10.26□□□□□ -0.77
SNCA-202ENST00000345009 LOC100130705A0A1B0GUX0 176 aa10.26□□□□□ -0.77
SNCA-202ENST00000345009 C5orf49A4QMS7 147 aa10.26□□□□□ -0.77
SNCA-202ENST00000345009 FAM181BA6NEQ2 426 aa10.26□□□□□ -0.77
SNCA-202ENST00000345009 OR6C6A6NF89 314 aa10.26□□□□□ -0.77
SNCA-202ENST00000345009 TVP23AA6NH52 213 aa10.26□□□□□ -0.77
SNCA-202ENST00000345009 SHISA9B4DS77 424 aa10.26□□□□□ -0.77
SNCA-202ENST00000345009 ATP6V1G2-DDX39BF2Z307 99 aa10.26□□□□□ -0.77
SNCA-202ENST00000345009 SLC16A6O15403 523 aa10.26□□□□□ -0.77
SNCA-202ENST00000345009 PRKYO43930 277 aa10.26□□□□□ -0.77
SNCA-202ENST00000345009 DOK2O60496 412 aa10.26□□□□□ -0.77
SNCA-202ENST00000345009 SCG5P05408 212 aa10.26□□□□□ -0.77
SNCA-202ENST00000345009 CELA3BP08861 270 aa10.26□□□□□ -0.77
SNCA-202ENST00000345009 SPARCP09486 303 aa10.26□□□□□ -0.77
SNCA-202ENST00000345009 CLUP10909 449 aa10.26□□□□□ -0.77
SNCA-202ENST00000345009 CCNOP22674 350 aa10.26□□□□□ -0.77
SNCA-202ENST00000345009 APEX1P27695 318 aaKnown RBP10.26□□□□□ -0.77
SNCA-202ENST00000345009 PEX2P28328 305 aa10.26□□□□□ -0.77
SNCA-202ENST00000345009 PCSK6P29122 969 aa10.26□□□□□ -0.77
SNCA-202ENST00000345009 ATP6V1E1P36543 226 aa10.26□□□□□ -0.77
SNCA-202ENST00000345009 SLC15A1P46059 708 aa10.26□□□□□ -0.77
SNCA-202ENST00000345009 HTR5AP47898 357 aa10.26□□□□□ -0.77
SNCA-202ENST00000345009 SELENOVP59797 346 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms