RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 A0A1W2PRB8 838 aa6.53□□□□□ -1.36
ZNF540-202ENST00000343599 IFITM10A6NMD0 228 aa6.53□□□□□ -1.36
ZNF540-202ENST00000343599 H0YGG7 62 aa6.53□□□□□ -1.36
ZNF540-202ENST00000343599 ITGB1BP1O14713 200 aa6.53□□□□□ -1.36
ZNF540-202ENST00000343599 DLEU1O43261 78 aa6.53□□□□□ -1.36
ZNF540-202ENST00000343599 MPZL2O60487 215 aa6.53□□□□□ -1.36
ZNF540-202ENST00000343599 KERAO60938 352 aa6.53□□□□□ -1.36
ZNF540-202ENST00000343599 MT-ND4LP03901 98 aa6.53□□□□□ -1.36
ZNF540-202ENST00000343599 FGF9P31371 208 aaPredicted RBP6.53□□□□□ -1.36
ZNF540-202ENST00000343599 SUCLG1P53597 346 aaKnown RBP6.53□□□□□ -1.36
ZNF540-202ENST00000343599 CSHL1Q14406 222 aa6.53□□□□□ -1.36
ZNF540-202ENST00000343599 KIAA0040Q15053 153 aa6.53□□□□□ -1.36
ZNF540-202ENST00000343599 ZNHIT3Q15649 155 aaPredicted RBP6.53□□□□□ -1.36
ZNF540-202ENST00000343599 FAM69AQ5T7M9 428 aa6.53□□□□□ -1.36
ZNF540-202ENST00000343599 ADNP2Q6IQ32 1131 aa6.53□□□□□ -1.36
ZNF540-202ENST00000343599 LRRC70Q7Z2Q7 622 aa6.53□□□□□ -1.36
ZNF540-202ENST00000343599 ANGPTL5Q86XS5 388 aa6.53□□□□□ -1.36
ZNF540-202ENST00000343599 OR5T3Q8NGG3 340 aa6.53□□□□□ -1.36
ZNF540-202ENST00000343599 SGMS2Q8NHU3 365 aa6.53□□□□□ -1.36
ZNF540-202ENST00000343599 TM4SF18Q96CE8 201 aa6.53□□□□□ -1.36
ZNF540-202ENST00000343599 ARL6Q9H0F7 186 aa6.53□□□□□ -1.36
ZNF540-202ENST00000343599 TLNRD1Q9H1K6 362 aa6.53□□□□□ -1.36
ZNF540-202ENST00000343599 IKZF5Q9H5V7 419 aa6.53□□□□□ -1.36
ZNF540-202ENST00000343599 ZNF703Q9H7S9 590 aaPredicted RBP6.53□□□□□ -1.36
ZNF540-202ENST00000343599 MID1IP1Q9NPA3 183 aa6.53□□□□□ -1.36
ZNF540-202ENST00000343599 MIEF1Q9NQG6 463 aa6.53□□□□□ -1.36
ZNF540-202ENST00000343599 DECR2Q9NUI1 292 aa6.53□□□□□ -1.36
ZNF540-202ENST00000343599 MED17Q9NVC6 651 aa6.53□□□□□ -1.36
ZNF540-202ENST00000343599 DNAJB12Q9NXW2 375 aaKnown RBP6.53□□□□□ -1.36
ZNF540-202ENST00000343599 COX16Q9P0S2 106 aa6.53□□□□□ -1.36
ZNF540-202ENST00000343599 POFUT2Q9Y2G5 429 aa6.53□□□□□ -1.36
ZNF540-202ENST00000343599 RIF1Q5UIP0 2472 aaKnown RBP6.53□□□□□ -1.36
ZNF540-202ENST00000343599 FRG2CA6NGY1 282 aa6.53□□□□□ -1.36
ZNF540-202ENST00000343599 HSBP1L1C9JCN9 74 aa6.53□□□□□ -1.36
ZNF540-202ENST00000343599 GATBO75879 557 aaKnown RBP6.53□□□□□ -1.36
ZNF540-202ENST00000343599 ZIC2O95409 532 aaPredicted RBP6.53□□□□□ -1.36
ZNF540-202ENST00000343599 IGF2P01344 180 aa6.53□□□□□ -1.36
ZNF540-202ENST00000343599 FABP3P05413 133 aa6.53□□□□□ -1.36
ZNF540-202ENST00000343599 IFNGR1P15260 489 aa6.53□□□□□ -1.36
ZNF540-202ENST00000343599 KLK2P20151 261 aa6.53□□□□□ -1.36
ZNF540-202ENST00000343599 GIFP27352 417 aa6.53□□□□□ -1.36
ZNF540-202ENST00000343599 MPIP34949 423 aa6.53□□□□□ -1.36
ZNF540-202ENST00000343599 ADH7P40394 386 aa6.53□□□□□ -1.36
ZNF540-202ENST00000343599 HCCSP53701 268 aa6.53□□□□□ -1.36
ZNF540-202ENST00000343599 SLC25A53Q5H9E4 307 aa6.53□□□□□ -1.36
ZNF540-202ENST00000343599 PTRHD1Q6GMV3 140 aaKnown RBP6.53□□□□□ -1.36
ZNF540-202ENST00000343599 MSRB3Q8IXL7 192 aa6.53□□□□□ -1.36
ZNF540-202ENST00000343599 RELL2Q8NC24 303 aaPredicted RBP6.53□□□□□ -1.36
ZNF540-202ENST00000343599 PROKR2Q8NFJ6 384 aa6.53□□□□□ -1.36
ZNF540-202ENST00000343599 OR4K2Q8NGD2 314 aa6.53□□□□□ -1.36
ZNF540-202ENST00000343599 CYSLTR2Q9NS75 346 aa6.53□□□□□ -1.36
ZNF540-202ENST00000343599 ANKRD12Q6UB98 2062 aa6.52□□□□□ -1.37
ZNF540-202ENST00000343599 GABRR3A8MPY1 467 aa6.52□□□□□ -1.37
ZNF540-202ENST00000343599 ITGA10O75578 1167 aa6.52□□□□□ -1.37
ZNF540-202ENST00000343599 ADH6P28332 368 aa6.52□□□□□ -1.37
ZNF540-202ENST00000343599 NMBRP28336 390 aa6.52□□□□□ -1.37
ZNF540-202ENST00000343599 MAP3K8P41279 467 aa6.52□□□□□ -1.37
ZNF540-202ENST00000343599 CDX1P47902 265 aaPredicted RBP6.52□□□□□ -1.37
ZNF540-202ENST00000343599 ADAM8P78325 824 aa6.52□□□□□ -1.37
ZNF540-202ENST00000343599 BLOC1S1P78537 153 aa6.52□□□□□ -1.37
ZNF540-202ENST00000343599 VLDLRP98155 873 aa6.52□□□□□ -1.37
ZNF540-202ENST00000343599 KCNMB1Q16558 191 aa6.52□□□□□ -1.37
ZNF540-202ENST00000343599 CCSMST1Q4G0I0 132 aa6.52□□□□□ -1.37
ZNF540-202ENST00000343599 ACSF3Q4G176 576 aaPredicted RBP6.52□□□□□ -1.37
ZNF540-202ENST00000343599 OR52W1Q6IF63 320 aa6.52□□□□□ -1.37
ZNF540-202ENST00000343599 DOK6Q6PKX4 331 aa6.52□□□□□ -1.37
ZNF540-202ENST00000343599 CD200R1LQ6Q8B3 271 aa6.52□□□□□ -1.37
ZNF540-202ENST00000343599 ZNF793Q6ZN11 406 aa6.52□□□□□ -1.37
ZNF540-202ENST00000343599 GPR137CQ8N3F9 429 aa6.52□□□□□ -1.37
ZNF540-202ENST00000343599 CPEB3Q8NE35 698 aaKnown RBP6.52□□□□□ -1.37
ZNF540-202ENST00000343599 OR9Q2Q8NGE9 314 aa6.52□□□□□ -1.37
ZNF540-202ENST00000343599 OR52N2Q8NGI0 321 aa6.52□□□□□ -1.37
ZNF540-202ENST00000343599 MAFIPQ8WZ33 124 aa6.52□□□□□ -1.37
ZNF540-202ENST00000343599 FAM120BQ96EK7 910 aaKnown RBP6.52□□□□□ -1.37
ZNF540-202ENST00000343599 NDUFAF3Q9BU61 184 aa6.52□□□□□ -1.37
ZNF540-202ENST00000343599 CACNG6Q9BXT2 260 aa6.52□□□□□ -1.37
ZNF540-202ENST00000343599 REEP1Q9H902 201 aa6.52□□□□□ -1.37
ZNF540-202ENST00000343599 C1orf109Q9NX04 203 aa6.52□□□□□ -1.37
ZNF540-202ENST00000343599 KLHL8Q9P2G9 620 aaPredicted RBP6.52□□□□□ -1.37
ZNF540-202ENST00000343599 CBLCQ9ULV8 474 aa6.52□□□□□ -1.37
ZNF540-202ENST00000343599 SF3B6Q9Y3B4 125 aaKnown RBP6.52□□□□□ -1.37
ZNF540-202ENST00000343599 OARD1Q9Y530 152 aa6.52□□□□□ -1.37
ZNF540-202ENST00000343599 CLDN16Q9Y5I7 305 aa6.52□□□□□ -1.37
ZNF540-202ENST00000343599 TRBV5-3A0A0A0MS03 114 aa6.52□□□□□ -1.37
ZNF540-202ENST00000343599 H7C417 338 aa6.52□□□□□ -1.37
ZNF540-202ENST00000343599 TP53I11O14683 189 aa6.52□□□□□ -1.37
ZNF540-202ENST00000343599 RGS14O43566 566 aa6.52□□□□□ -1.37
ZNF540-202ENST00000343599 QDPRP09417 244 aa6.52□□□□□ -1.37
ZNF540-202ENST00000343599 RPA2P15927 270 aa6.52□□□□□ -1.37
ZNF540-202ENST00000343599 ZNF14P17017 642 aaPredicted RBP6.52□□□□□ -1.37
ZNF540-202ENST00000343599 NT5EP21589 574 aa6.52□□□□□ -1.37
ZNF540-202ENST00000343599 TBXA2RP21731 343 aa6.52□□□□□ -1.37
ZNF540-202ENST00000343599 DRD5P21918 477 aa6.52□□□□□ -1.37
ZNF540-202ENST00000343599 NFYBP25208 207 aa6.52□□□□□ -1.37
ZNF540-202ENST00000343599 ANXA11P50995 505 aaKnown RBP6.52□□□□□ -1.37
ZNF540-202ENST00000343599 RBX1P62877 108 aa6.52□□□□□ -1.37
ZNF540-202ENST00000343599 MPPED2Q15777 294 aa6.52□□□□□ -1.37
ZNF540-202ENST00000343599 ZNF549Q6P9A3 640 aa6.52□□□□□ -1.37
ZNF540-202ENST00000343599 LYPD4Q6UWN0 246 aa6.52□□□□□ -1.37
ZNF540-202ENST00000343599 Q6ZTK2 550 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms