RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 ST7LQ8TDW4 575 aa13.04□□□□□ -0.32
TDP2-201ENST00000341060 RELTQ969Z4 430 aa13.04□□□□□ -0.32
TDP2-201ENST00000341060 ARL5BQ96KC2 179 aa13.04□□□□□ -0.32
TDP2-201ENST00000341060 SFXN2Q96NB2 322 aa13.04□□□□□ -0.32
TDP2-201ENST00000341060 NPAS1Q99742 590 aa13.04□□□□□ -0.32
TDP2-201ENST00000341060 TGIF2Q9GZN2 237 aa13.04□□□□□ -0.32
TDP2-201ENST00000341060 APMAPQ9HDC9 416 aa13.04□□□□□ -0.32
TDP2-201ENST00000341060 MRPS18BQ9Y676 258 aaKnown RBP13.04□□□□□ -0.32
TDP2-201ENST00000341060 IGHV3-20A0A0C4DH32 117 aa13.03□□□□□ -0.32
TDP2-201ENST00000341060 LOC107986453A0A1B0GWG9 222 aa13.03□□□□□ -0.32
TDP2-201ENST00000341060 A0A1W2PPL8 197 aa13.03□□□□□ -0.32
TDP2-201ENST00000341060 MEGF11A6BM72 1044 aa13.03□□□□□ -0.32
TDP2-201ENST00000341060 HMSDA8MTL9 139 aa13.03□□□□□ -0.32
TDP2-201ENST00000341060 AQP8O94778 261 aa13.03□□□□□ -0.32
TDP2-201ENST00000341060 ZNF823P16415 610 aa13.03□□□□□ -0.32
TDP2-201ENST00000341060 ACHEP22303 614 aa13.03□□□□□ -0.32
TDP2-201ENST00000341060 ARRB1P49407 418 aaPredicted RBP13.03□□□□□ -0.32
TDP2-201ENST00000341060 DAP3P51398 398 aaKnown RBP13.03□□□□□ -0.32
TDP2-201ENST00000341060 TAS2R19P59542 299 aa13.03□□□□□ -0.32
TDP2-201ENST00000341060 FMODQ06828 376 aa13.03□□□□□ -0.32
TDP2-201ENST00000341060 C17orf67Q0P5P2 114 aa13.03□□□□□ -0.32
TDP2-201ENST00000341060 NHLRC3Q5JS37 347 aa13.03□□□□□ -0.32
TDP2-201ENST00000341060 ADGRE4PQ86SQ3 457 aa13.03□□□□□ -0.32
TDP2-201ENST00000341060 GABRG1Q8N1C3 465 aa13.03□□□□□ -0.32
TDP2-201ENST00000341060 MUC20Q8N307 709 aaPredicted RBP13.03□□□□□ -0.32
TDP2-201ENST00000341060 OR13C3Q8NGS6 347 aa13.03□□□□□ -0.32
TDP2-201ENST00000341060 MFSD8Q8NHS3 518 aa13.03□□□□□ -0.32
TDP2-201ENST00000341060 SUN5Q8TC36 379 aa13.03□□□□□ -0.32
TDP2-201ENST00000341060 PCNPQ8WW12 178 aaKnown RBP13.03□□□□□ -0.32
TDP2-201ENST00000341060 SEH1LQ96EE3 360 aa13.03□□□□□ -0.32
TDP2-201ENST00000341060 KCNK17Q96T54 332 aa13.03□□□□□ -0.32
TDP2-201ENST00000341060 FOXQ1Q9C009 403 aa13.03□□□□□ -0.32
TDP2-201ENST00000341060 ALX4Q9H161 411 aaPredicted RBP13.03□□□□□ -0.32
TDP2-201ENST00000341060 ZNF768Q9H5H4 540 aaKnown RBP13.03□□□□□ -0.32
TDP2-201ENST00000341060 SCPEP1Q9HB40 452 aa13.03□□□□□ -0.32
TDP2-201ENST00000341060 SLC22A11Q9NSA0 550 aa13.03□□□□□ -0.32
TDP2-201ENST00000341060 SUSD2Q9UGT4 822 aa13.03□□□□□ -0.32
TDP2-201ENST00000341060 LOC390937A0A1W2PQ73 354 aa13.03□□□□□ -0.32
TDP2-201ENST00000341060 NPIPA5E9PKD4 350 aa13.03□□□□□ -0.32
TDP2-201ENST00000341060 I3L521 148 aa13.03□□□□□ -0.32
TDP2-201ENST00000341060 LDLRAD4O15165 306 aa13.03□□□□□ -0.32
TDP2-201ENST00000341060 HRGP04196 525 aa13.03□□□□□ -0.32
TDP2-201ENST00000341060 ITGB2P05107 769 aa13.03□□□□□ -0.32
TDP2-201ENST00000341060 APOBEC1P41238 236 aaKnown RBP13.03□□□□□ -0.32
TDP2-201ENST00000341060 SUMO3P55854 103 aaPredicted RBP13.03□□□□□ -0.32
TDP2-201ENST00000341060 FBXW4P57775 412 aa13.03□□□□□ -0.32
TDP2-201ENST00000341060 FOXL2P58012 376 aa13.03□□□□□ -0.32
TDP2-201ENST00000341060 SEC61A1P61619 476 aaKnown RBP13.03□□□□□ -0.32
TDP2-201ENST00000341060 C2orf68Q2NKX9 166 aa13.03□□□□□ -0.32
TDP2-201ENST00000341060 DEGS2Q6QHC5 323 aa13.03□□□□□ -0.32
TDP2-201ENST00000341060 C3P1Q6ZMU1 363 aa13.03□□□□□ -0.32
TDP2-201ENST00000341060 C16orf47Q6ZP98 133 aaPredicted RBP13.03□□□□□ -0.32
TDP2-201ENST00000341060 H1FNTQ75WM6 255 aaPredicted RBP13.03□□□□□ -0.32
TDP2-201ENST00000341060 CDH26Q8IXH8 852 aa13.03□□□□□ -0.32
TDP2-201ENST00000341060 OR51A2Q8NGJ7 313 aa13.03□□□□□ -0.32
TDP2-201ENST00000341060 OR8S1Q8NH09 359 aa13.03□□□□□ -0.32
TDP2-201ENST00000341060 STT3BQ8TCJ2 826 aa13.03□□□□□ -0.32
TDP2-201ENST00000341060 DVL3Q92997 716 aaPredicted RBP13.03□□□□□ -0.32
TDP2-201ENST00000341060 POTEKPQ9BYX7 375 aa13.03□□□□□ -0.32
TDP2-201ENST00000341060 CGGBP1Q9UFW8 167 aaPredicted RBP13.03□□□□□ -0.32
TDP2-201ENST00000341060 KIF25Q9UIL4 384 aa13.03□□□□□ -0.32
TDP2-201ENST00000341060 OR52A1Q9UKL2 312 aa13.03□□□□□ -0.32
TDP2-201ENST00000341060 NPIPA1Q9UND3 350 aa13.03□□□□□ -0.32
TDP2-201ENST00000341060 SRPK3Q9UPE1 567 aa13.03□□□□□ -0.32
TDP2-201ENST00000341060 SDK1Q7Z5N4 2213 aa13.02□□□□□ -0.32
TDP2-201ENST00000341060 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.02□□□□□ -0.33
TDP2-201ENST00000341060 A0A0A6YYH2 397 aa13.02□□□□□ -0.33
TDP2-201ENST00000341060 A6NJ64 397 aa13.02□□□□□ -0.33
TDP2-201ENST00000341060 DOK2O60496 412 aa13.02□□□□□ -0.33
TDP2-201ENST00000341060 ZNF354AO60765 605 aaPredicted RBP13.02□□□□□ -0.33
TDP2-201ENST00000341060 DNASE1L1P49184 302 aa13.02□□□□□ -0.33
TDP2-201ENST00000341060 OR7A5Q15622 319 aa13.02□□□□□ -0.33
TDP2-201ENST00000341060 MPPED2Q15777 294 aa13.02□□□□□ -0.33
TDP2-201ENST00000341060 RHBDD2Q6NTF9 364 aa13.02□□□□□ -0.33
TDP2-201ENST00000341060 LRFN4Q6PJG9 635 aa13.02□□□□□ -0.33
TDP2-201ENST00000341060 ZNF704Q6ZNC4 412 aaPredicted RBP13.02□□□□□ -0.33
TDP2-201ENST00000341060 HDDC2Q7Z4H3 204 aa13.02□□□□□ -0.33
TDP2-201ENST00000341060 SLC25A45Q8N413 288 aa13.02□□□□□ -0.33
TDP2-201ENST00000341060 NKAIN3Q8N8D7 197 aa13.02□□□□□ -0.33
TDP2-201ENST00000341060 TMEM229BQ8NBD8 167 aa13.02□□□□□ -0.33
TDP2-201ENST00000341060 PTX4Q96A99 478 aa13.02□□□□□ -0.33
TDP2-201ENST00000341060 SLCO5A1Q9H2Y9 848 aa13.02□□□□□ -0.33
TDP2-201ENST00000341060 C1orf198Q9H425 327 aa13.02□□□□□ -0.33
TDP2-201ENST00000341060 EXO5Q9H790 373 aa13.02□□□□□ -0.33
TDP2-201ENST00000341060 VPS13AQ96RL7 3174 aa13.02□□□□□ -0.33
TDP2-201ENST00000341060 IGLV3-12A0A075B6K2 115 aa13.01□□□□□ -0.33
TDP2-201ENST00000341060 TEX51A0A1B0GUA7 166 aa13.01□□□□□ -0.33
TDP2-201ENST00000341060 TMEM269A0A1B0GVZ9 245 aa13.01□□□□□ -0.33
TDP2-201ENST00000341060 DCDC2BA2VCK2 349 aa13.01□□□□□ -0.33
TDP2-201ENST00000341060 UBCP0CG48 685 aaKnown RBP13.01□□□□□ -0.33
TDP2-201ENST00000341060 ZNF35P13682 527 aa13.01□□□□□ -0.33
TDP2-201ENST00000341060 M6PRP20645 277 aa13.01□□□□□ -0.33
TDP2-201ENST00000341060 S100A11P31949 105 aa13.01□□□□□ -0.33
TDP2-201ENST00000341060 POU3F1Q03052 451 aaPredicted RBP13.01□□□□□ -0.33
TDP2-201ENST00000341060 AANATQ16613 207 aa13.01□□□□□ -0.33
TDP2-201ENST00000341060 ZNF627Q7L945 461 aa13.01□□□□□ -0.33
TDP2-201ENST00000341060 LYPD6Q86Y78 171 aa13.01□□□□□ -0.33
TDP2-201ENST00000341060 WDFY1Q8IWB7 410 aa13.01□□□□□ -0.33
TDP2-201ENST00000341060 TNFAIP8L1Q8WVP5 186 aa13.01□□□□□ -0.33
TDP2-201ENST00000341060 ASB13Q8WXK3 278 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms